Ectopseudomonas khazarica: JLK41_05925
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Entry
JLK41_05925 CDS
T07269
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pkh
Ectopseudomonas khazarica
Pathway
pkh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pkh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JLK41_05925
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pkh02000
]
JLK41_05925
Transporters [BR:
pkh02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
JLK41_05925
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
At2g29880_C
Motif
Other DBs
NCBI-ProteinID:
QTS89022
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All DBs
Position
1294265..1295305
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AA seq
346 aa
AA seq
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MSSLKKQFVTVLFVSAISTIAQARDLTAVGFGGVTQEAFDKAYFKPFTAQSGLPIVQDTY
GGGLAKQKAMVESGNPTWDLVQMDQNEMELACEQGLLEELDLKRLKNAPEVDPEAFSTCG
VGAFVWSEVMTYDQKKFAADGPKSWADFWNVQKWPGKRGLRKQARMTLEIALMADGVAPQ
DVYKVLATQQGQDRAFAKLDEIKPYIQWWETGAQPLEWMAAGDLAMTAAYNGRIAIANQQ
GSQFPLIWQQQLYSMDYWTIIKDTPNLEQSYRLLDFILSRQAQEDFAHAIPYGIVNSKAS
AALDARTVQTLPNAPANMKDALLLDTPFWVNYEEDLMARFTRWVAQ
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgttgaagaaacagttcgtcactgtccttttcgtgagtgcaatcagcaccatc
gctcaagctcgcgacctcacggccgtcggtttcgggggcgtcacgcaggaggccttcgac
aaggcctacttcaaacctttcaccgcgcaaagcggcctgccgatcgtccaggacacctac
ggcggtggcttggccaaacagaaggccatggtcgagtccgggaaccccacctgggatctg
gtgcagatggatcagaacgagatggagctggcctgtgagcaggggctgctcgaggaactc
gatctcaagcgactcaagaatgcgcccgaggtagaccccgaagcgttctcgacctgcggt
gtcggcgctttcgtctggtccgaggtgatgacctatgaccagaagaagttcgctgctgac
ggcccgaaaagctgggcggatttctggaatgtgcagaagtggccaggcaagcgcggcttg
cgcaaacaggcacgcatgaccctggaaattgccttgatggcggacggcgtggcgccgcag
gacgtctacaaggtgctggccacccagcaaggccaggatcgtgcgttcgccaagctggac
gagatcaaaccctacattcaatggtgggaaaccggcgcgcagcctctggagtggatggct
gccggtgatctggccatgacggcggcctacaacgggcggatcgccatcgccaatcagcag
ggcagtcagtttccgctgatctggcagcagcagctctacagcatggactactggacgatc
atcaaggacacgccgaacctggagcagagttaccggcttctcgatttcatccttagccgc
caggcccaggaggactttgcccatgccattccctatggaatcgtcaacagcaaggccagt
gccgcgctggatgccagaaccgtgcagacgctgcccaatgccccggccaacatgaaggac
gccttgttgctggataccccgttctgggtcaactacgaagaagacctgatggctcgcttc
acccgctgggttgcgcagtaa
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