Ectopseudomonas khazarica: JLK41_06240
Help
Entry
JLK41_06240 CDS
T07269
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K14414
transcriptional regulatory protein RtcR
Organism
pkh
Ectopseudomonas khazarica
Brite
KEGG Orthology (KO) [BR:
pkh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pkh03000
]
JLK41_06240
Transcription factors [BR:
pkh03000
]
Prokaryotic type
Other transcription factors
Others
JLK41_06240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA_5
AAA
Mg_chelatase
AAA_16
AAA_22
NACHT
AAA_30
MCM
BrxC_BrxD
AAA_19
AAA_33
ATPase_2
AAA_7
AAA_14
AAA_2
Motif
Other DBs
NCBI-ProteinID:
QTS87758
LinkDB
All DBs
Position
1359430..1361031
Genome browser
AA seq
533 aa
AA seq
DB search
MNGKRTVAIGFIGATLDRVGKGANRWNKWRPSIGLCQQADLLIDRLELIHGTDARDLSLA
ERIRADIQQISPETEVRLQPMHLRNPWDFEEVYGALHDFTSGYAFDTEHEDYLVHITTGT
HVAQICWFLLTEARYLPARLVQTSPARKRDEAAQVTGTHALIDLDLSRYDRIASRFQSKR
LESLAFLKSGIATRNDAFNRSIEQIERVALRSSAPMLLIGPTGAGKSFLARRVYELKRSR
HLVEGRFVEVNCATLRGDGAMSALFGHIKGAFTGAQNARDGLLRAADGGMLFLDEIGELG
LDEQAMLLKAIEEKRFFPMGSDKEVSSDFLLIAGTHRDLRTRVAEGLFREDLYARINLWT
FELPGLAGRREDIEPNIDFELERHAREQGRMVRFNLEARRRYLAFASSGEAAWQGNFREL
SASITRMATLADSGRIDEAQVEEEITRLRRAWGLAQQQDALGDLLGEQAAGLDLFDRLQL
QAVIEVCRQADSLSEAGRRLYQVSRLAKAQPNDADRLRKYLARFGLDWQALRQ
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgaatggcaagcgcacggtcgccatcggtttcatcggcgcgaccctggatcgggtcggc
aagggcgccaaccgctggaacaagtggcggccgagcatcggtctgtgtcagcaggccgat
ctgctgatcgatcgcctggagctgattcacggtaccgatgcacgcgacctcagcctggcc
gagcgcatccgcgccgacatccagcagatttccccggagaccgaggtgcgtctgcagccg
atgcacctgcgcaacccctgggatttcgaggaggtgtatggcgcactgcatgacttcacc
agtggttatgccttcgataccgagcacgaggactacctggtgcacatcaccaccggtacc
cacgtggcccagatctgctggttcctgctgaccgaggcgcgttatctgccggcgcgcctg
gtgcagacctcaccggcgcgcaagcgtgatgaggcggcgcaggtcaccggcacccatgca
ctgatcgacctcgacctgtcgcgctatgaccgcatcgcctcgcgttttcagagcaagcgc
ctggaaagcctggccttcctcaagtccggcatcgccacgcgcaatgacgccttcaaccgc
agcatcgagcagatcgaacgggtcgcgttgcgctcatcggcgccgatgctgctgatcggc
ccgaccggtgccggcaagtcgttcctcgcccgccgcgtgtacgaactcaagcgcagtcgc
catctggtcgagggacgtttcgtcgaggtcaactgcgccaccttgcgcggcgatggcgcg
atgtcggcgctgttcggccatatcaagggcgccttcaccggtgcgcagaacgcccgcgac
ggcctgctgcgcgcggccgatggcggcatgctgttcctcgacgagatcggcgagctgggt
ctcgacgagcaggccatgctgctcaaggccatcgaggaaaaacgcttcttcccgatgggc
tcggacaaggaggtaagcagcgactttctgctgatcgccggcacgcaccgcgacctgcgt
acgcgggtcgccgagggcctgttccgtgaggacctctacgcccgcatcaacctgtggacc
ttcgagctgccgggcctggccgggcggcgtgaggacatcgaaccgaacatcgacttcgag
ctggagcgtcatgctcgcgagcaggggcgcatggtgcgcttcaacctggaggcacggcgc
cgctacctggcgtttgccagctcgggcgaggcggcctggcagggcaacttccgcgagctg
tcggcctcgatcacgcgcatggccaccctggccgacagcgggcgtatcgacgaggcgcag
gtcgaggaggaaatcacgcggctgcggcgggcctgggggctggcccagcagcaggacgcg
ctgggcgacctgctcggggagcaggctgccggcctcgatctgttcgaccgtctgcagctg
caggcggtgatcgaggtgtgccgccaggccgacagcctgtcggaagcgggcagacgcctg
tatcaggtatcacgcctggccaaggcgcaacccaacgatgccgaccgtctgcgcaagtac
ctggcgcgcttcggcctggattggcaggcgctgcgtcagtag
DBGET
integrated database retrieval system
