Pseudomonas khazarica: JLK41_06380
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Entry
JLK41_06380 CDS
T07269
Symbol
garD
Name
(GenBank) galactarate dehydratase
KO
K01708
galactarate dehydratase [EC:
4.2.1.42
]
Organism
pkh
Pseudomonas khazarica
Pathway
pkh00053
Ascorbate and aldarate metabolism
pkh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pkh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
JLK41_06380 (garD)
Enzymes [BR:
pkh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.42 galactarate dehydratase
JLK41_06380 (garD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GD_AH_C
GD_AH_second
SAF
Abhydrolase_6
Motif
Other DBs
NCBI-ProteinID:
QTS87785
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Position
1396241..1397797
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AA seq
518 aa
AA seq
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MQLIPHQDSPRYIRLHPSDNVGVVVNDQGVAAGGRFDDGLTATCGIPQSHKVALQDIAEG
AEVVRYGEVIGYALEPIAAGSWVTEQVLRMPEPPLLDNLPKATIKAAPGEPLEGYTFEGF
RNPDGSVGTRNILGVTTTVQCVVGVLDHVVERVRRELLPRYPNVDDVVALSHSYGCGVAI
NAPDAVVPIRTLYNISRNPNFAGQALVISLGCEKLQASQLMDGDLLTNGMDEEDWLFRLQ
DSGSGFAGMVEQIMDMIEARLQVLDLRRRETVPASELVVGMQCGGSDAFSGITANPALGV
AADLLVRAGATVMFSENTEVRDGIHLLTPRAASVEVADALIREMDWYDRYLQRGMADRSA
NTTPGNKKGGLNNIVEKAMGSIAKSGNSPIAGVVAPGERIRGKGLWFCATPASDFICGTL
QLAAGMNLHIFTTGRGTPYGLSMVPVIKVATRTQLAERWPDLIDVDAGQILSGRMTLEQM
GWYIFQLYLDIASGRKQACAERLRLHNDLVLFNPAPVT
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgcagttgattccccatcaggattcgccccgttacatccgcctgcacccgagcgacaac
gtcggcgtggtggtcaacgaccagggtgtggccgccggcggccgcttcgacgatggcctg
acggccacctgcggcattccgcagagccacaaggtggcgctgcaggacatcgccgaaggc
gccgaggtggtgcgctacggcgaggtcatcggctatgccctcgagcccatcgccgctggc
agctgggtcaccgagcaggtgctgcgcatgcccgagccgccgctgctcgacaacctgccc
aaggcgaccatcaaggccgcacccggcgagccgctggaaggctacaccttcgagggcttc
cgtaacccggacggcagtgtcggcacccgtaacatcctcggtgtgaccaccaccgtgcag
tgcgtggtcggcgtgctcgatcacgtggtcgagcgggtgcgccgggaactcctgcccagg
taccccaacgtcgatgacgtggtggcgctgtcgcacagctatggctgcggggtggcgatc
aatgcgccggatgccgtggtgccgatccgcaccctgtacaacatcagccgcaatcccaac
ttcgctggccaggcgctggtgatcagcctcggctgcgagaagctgcaggccagccagctg
atggatggcgacctgctgaccaacggcatggacgaggaggactggctgttccgcctgcag
gactccggcagcggcttcgccggcatggtcgagcagatcatggacatgatcgaggcgcgc
ctgcaggtcctcgacctgcgccgccgcgaaacggtgcccgcgagcgagctggtggtgggc
atgcagtgcggcggcagcgacgccttctccggcatcaccgccaacccggcgctgggcgtg
gccgccgacctgctggtgcgcgccggtgccacggtgatgttcagcgagaacaccgaggtg
cgtgacggtatccatctgctcactccgcgtgccgccagcgtcgaggtggccgatgcgctg
atccgcgagatggactggtacgaccgctacctgcagcgcggcatggccgaccgcagcgcc
aacaccacaccgggcaacaagaagggcgggctgaacaacatcgtcgagaaggccatgggc
tcgatcgccaagtccggcaacagcccgattgccggggtggtcgcgccgggcgagcgcatt
cgcggcaaaggcctgtggttctgcgccacgccggccagcgacttcatctgcggtacgctg
cagctggcggcggggatgaacctgcatatcttcaccaccgggcgcggcacgccctacggg
ctgtccatggtgccggtgatcaaggtggccacgcgcacccagctggccgagcgctggccc
gacctgatcgacgtcgacgccgggcagatcctctccggacgcatgaccctggaacagatg
ggctggtacatcttccagctctacctggacattgccagtggccgcaagcaggcctgtgcc
gagcgcctgcgcctgcacaatgacctggtgctcttcaacccggcgccggtgacctga
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