Ectopseudomonas khazarica: JLK41_06580
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Entry
JLK41_06580 CDS
T07269
Name
(GenBank) OprD family porin
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
pkh
Ectopseudomonas khazarica
Pathway
pkh01501
beta-Lactam resistance
pkh02020
Two-component system
Module
pkh_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
pkh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JLK41_06580
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JLK41_06580
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pkh02000
]
JLK41_06580
01504 Antimicrobial resistance genes [BR:
pkh01504
]
JLK41_06580
Transporters [BR:
pkh02000
]
Other transporters
Pores ion channels [TC:
1
]
JLK41_06580
Antimicrobial resistance genes [BR:
pkh01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
JLK41_06580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
DUF5777
Motif
Other DBs
NCBI-ProteinID:
QTS87823
LinkDB
All DBs
Position
complement(1437680..1438933)
Genome browser
AA seq
417 aa
AA seq
DB search
MQVMKWSVIALAVAAGTSQMAVASSQSESNGFIEDSSFNIFNRALYMNRDFRSGGVQRNA
QSYREETGLGIRLLFESGFTQGTVGVGFDAHSLSSIKLDGGRGHRGNGLFDQAGDGHSED
TQTEVGGAIKFRISDTVLKYGNQEVASPVFSTDDSRLLPEVATGTLVTSNEIAGLELTAG
RFTAMSSQVSTDRDTFGLKEINILGASYSITDDLSAALHYSDADDNFKKYYVNLNYNLPL
ADDQALNFDLNGYRTRGQGKELLGEMDNNIWSLAAAYSMGAHKFTVAHQRSSGDTGYRYG
DIDGGGTIWLSNSVQYSDFNAKDETSWQVRYDINMASYGVPGLSFMTRYIVGDNIDVGSG
SDAQERELDIEAKYVIQDGAAKDLSFRIRNAFYRADNDYGGDINDFRLIVEYPLSVL
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtgatgaagtggagcgtaatcgccctggcagtcgccgcgggcacttcccagatg
gcagtggcatccagccagtccgagtcgaacggtttcatcgaagatagcagcttcaacatc
ttcaaccgtgccctgtacatgaaccgtgacttccgttctggcggtgttcaacgcaacgct
cagagctaccgcgaagaaaccggtctgggcatccgtctgctgttcgaatccggcttcacc
caaggcaccgtaggcgtcggcttcgacgctcactccctgagcagcatcaagctcgacggc
ggccgcggtcaccgtggcaatggcctgttcgaccaagctggcgacggccacagcgaagac
acccagactgaagttggcggcgctatcaagttccgtatttccgataccgttctgaagtac
ggtaatcaggaagtagccagcccggtattctccaccgacgacagccgcctgctgccggaa
gttgctaccggtactctggtcaccagcaatgaaatcgccggcctggaactgactgctggt
cgcttcaccgcgatgagcagccaggtcagcaccgaccgcgacaccttcggcctgaaggaa
atcaacatcctcggcgccagctacagcatcaccgacgatctgagtgctgccctgcactac
tccgacgccgatgacaacttcaagaaatattacgtcaacctgaactacaacctgccgctg
gcagatgatcaggcactgaacttcgacctgaacggctaccgcactcgcggtcaaggcaaa
gagctgctgggcgagatggacaacaacatctggagcctggcagccgcctactccatgggc
gcccacaagttcaccgttgcgcaccagcgttccagcggcgacaccggctatcgctatggc
gatatcgatggtggcggcaccatctggctgtccaactcggttcagtactccgacttcaac
gccaaggacgaaacctcctggcaggtgcgttatgacatcaacatggcctcctacggcgtg
ccgggcctgagcttcatgacccgctacatcgtcggtgacaacatcgatgtcggcagcggc
tccgacgctcaagagcgcgagctggacatcgaagccaagtacgtgatccaggacggcgca
gcgaaggacctgtccttccgtatccgtaatgcgttctaccgtgcagacaacgactacggc
ggcgacatcaatgacttccgcctgatcgtcgaatacccgctgagcgttctgtaa
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