Ectopseudomonas khazarica: JLK41_06635
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Entry
JLK41_06635 CDS
T07269
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
pkh
Ectopseudomonas khazarica
Pathway
pkh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pkh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
JLK41_06635 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkh03400
]
JLK41_06635 (ruvB)
Enzymes [BR:
pkh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JLK41_06635 (ruvB)
DNA repair and recombination proteins [BR:
pkh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JLK41_06635 (ruvB)
RecFOR pathway proteins
JLK41_06635 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
AAA_3
AAA_16
Mg_chelatase
nSTAND3
TIP49
AAA_14
RNA_helicase
AAA_17
ABC_tran
AAA_28
Rad17
NTPase_1
AAA_18
Sigma54_activ_2
NACHT
Resolvase
TsaE
AAA_24
NB-ARC
AAA_19
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
QTS87833
LinkDB
All DBs
Position
1448407..1449459
Genome browser
AA seq
350 aa
AA seq
DB search
MIEADRLITSSPREREEQQDRAIRPLRLADYTGQPVVREQMALFIQAARGRAEALDHTLI
FGPPGLGKTTLANIIAQEMGSSIKSTSGPVLERPGDLAALLTNLESGDVLFIDEIHRLSP
VVEEVLYPAMEDFQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGMLTNPLRDRFGIVQR
LEFYGVDDLATIVSRSAGILGLPIEAKGAYEIARRARGTPRIANRLLRRVRDFAEVRGSG
QISQLIADQALNLLDVDERGFDHSDRRLLLAMIEKFDGGPVGLDSLAAAIGEERHTIEDV
LEPYLIQQGYMMRTPRGRVVTRHAYQHFGLNTPSRQAEPPATDLFTAGDE
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaagccgatcgcctgatcacctccagcccgcgcgagcgtgaagagcagcaggac
cgcgccattcggccgctgcggctggccgactacaccgggcagcccgtcgtgcgcgagcag
atggcgttgttcatccaggctgcgcgggggcgggcggaagcgctcgaccataccctgatc
ttcggtccgcccggcctgggcaagaccaccctggccaacatcatcgcccaggagatgggc
agttcgatcaagagcacctcgggcccggtactggagcgtccgggtgatctggcggcgctg
ctgaccaacctggaaagcggcgatgtgctgttcatcgacgagattcaccgtctgtcaccg
gtggtcgaggaagtgctgtacccggccatggaggatttccagctcgacatcatgatcggc
gagggcccggccgcacgttcgatcaagctggatctgccgccgttcaccctggtcggcgcc
acgacccgtgccggcatgctgaccaacccgttgcgtgaccgtttcggcatcgtccagcgc
ctggagttctacggcgtcgacgacctggccaccatcgtctcgcgctccgccggtatcctg
gggctgcccatcgaggccaagggggcctacgagattgcccgccgcgcccggggcacgccg
cgcatcgccaaccgcctgctgcgccgggtgcgtgacttcgccgaagtgcgcggttccggg
cagatctcccagctgatcgccgaccaggcgctgaacctgctggatgtcgacgaacgtggc
ttcgatcactccgaccgtcgcttgctgctggcgatgatcgagaagttcgacggcggcccg
gtcgggctcgacagcctggcggcagccatcggcgaggaacgccacaccatcgaggatgtg
ctcgaaccctatctcatccagcagggctacatgatgcgtaccccgcgcgggcgtgtggtg
acgcggcatgcctaccagcacttcggtctcaacacgccgtcacgccaggccgagccgcct
gccaccgacctgttcacggcgggcgacgaatga
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