Ectopseudomonas khazarica: JLK41_08925
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Entry
JLK41_08925 CDS
T07269
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pkh
Ectopseudomonas khazarica
Brite
KEGG Orthology (KO) [BR:
pkh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pkh03009
]
JLK41_08925 (rimO)
Enzymes [BR:
pkh01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
JLK41_08925 (rimO)
Ribosome biogenesis [BR:
pkh03009
]
Prokaryotic type
ribosomal protein modification factors
JLK41_08925 (rimO)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
CLP1_P
RNase_II_C_S1
YajR_YAM
TRAM
Matrix_Paramyxo_N
Motif
Other DBs
NCBI-ProteinID:
QTS88266
LinkDB
All DBs
Position
complement(1896389..1897723)
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AA seq
444 aa
AA seq
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MTTTQTKKAPSVGFISLGCPKATVDSERILTQLRMEGYEIVPTYQDADVVVVNTCGFIDS
AKAESLDAIGEAIAENGKVIVTGCMGVAENSIRDVHPSVLAVTGPQQYEQVVSAVHEVIP
PKTEHNPLIDLVPPQGIKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLSE
AERLVKAGVKELLVISQDTSAYGVDLKYKLDFWNGQPVKTRMLELCEALSAMGVWVRLHY
VYPYPNVDDVIPLMAAGKLLPYLDIPFQHASPKVLKSMKRPAFEDKTLARIKKWREICPE
LTIRSTFIVGFPGETEEDFQYLLDWLSEAQLDRVGCFQYSPVEGAPANDLGLEPVPDDVK
QERRERFMAHQQAISSARLQAKIGLEMDVLVDEVDGEGAVARSWADAPEIDGSVFIDATN
VKPGDKVRVRIVDADEYDMWGELV
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgacaactactcaaactaagaaagctcctagtgtagggtttatttccttagggtgcccc
aaggcgaccgtcgactccgaacgcatcctgacccagctgcgcatggaaggttacgagatc
gtgccgacctaccaggatgccgacgtggtggtggtcaacacctgcggcttcatcgacagc
gccaaggccgaatccctggatgccatcggcgaggcgatcgccgagaacggcaaggtgatc
gtcaccggctgcatgggcgtggccgagaacagcatccgtgacgtgcatcccagcgtgctg
gccgtgaccggcccgcagcagtacgagcaggtggtcagtgcggtgcacgaggtgattcca
ccgaaaaccgagcacaacccgctgatcgatctggtgccgccgcagggcatcaagctgaca
ccgcgtcattatgcgtacctgaagatttccgaaggctgcaaccacagttgcagcttctgc
atcatcccgtcgatgcgcggcaagctggtcagccgcccggtcggcgacgtgctcagcgaa
gccgagcgcctggtcaaggctggcgtgaaggagctgctggtgatcagccaggacaccagc
gcctatggtgtggacctgaagtacaagctggacttctggaacgggcagccggtcaagacc
cgcatgctcgaactgtgcgaggccctgtcggccatgggtgtatgggtgcgcctgcactac
gtctacccctaccccaacgttgacgacgtgatcccgctgatggcggccggcaagctgttg
ccctacctcgacattcctttccagcacgccagcccgaaagtgctcaagtcgatgaagcgc
ccggccttcgaagacaagaccctggcccgtatcaagaagtggcgcgagatctgccccgag
ctgaccatccgctccaccttcatcgtcggcttcccgggcgagaccgaggaagacttccag
tacctgctcgactggctgagcgaagcccagctcgaccgcgtcggctgcttccagtactcg
ccggtggaaggcgccccggccaacgacctgggcctggagccggtgccggacgacgtcaag
caggaacgcagggagcgcttcatggcgcaccagcaggccatcagctcggcacgcctgcag
gccaagatcggcctggagatggacgtgctggtcgacgaagtggacggcgaaggcgccgtc
gcccgttcctgggccgacgctccagagatcgacggcagcgtgttcatcgacgccaccaac
gtgaagcccggtgacaaggtgcgcgtgcgcatcgtcgatgccgatgaatacgacatgtgg
ggcgagctggtctga
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