Ectopseudomonas khazarica: JLK41_10025
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Entry
JLK41_10025 CDS
T07269
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pkh
Ectopseudomonas khazarica
Brite
KEGG Orthology (KO) [BR:
pkh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pkh03032
]
JLK41_10025 (gyrA)
03400 DNA repair and recombination proteins [BR:
pkh03400
]
JLK41_10025 (gyrA)
Enzymes [BR:
pkh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
JLK41_10025 (gyrA)
DNA replication proteins [BR:
pkh03032
]
Prokaryotic type
DNA Topoisomerases
JLK41_10025 (gyrA)
DNA repair and recombination proteins [BR:
pkh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JLK41_10025 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QTS88473
LinkDB
All DBs
Position
2118941..2121712
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AA seq
923 aa
AA seq
DB search
MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYLLVDGQGNFGSVDGDNAAAM
RYTEVRMTKLAHELLADLDKETVDWVPNYDGTEQIPAVMPTKVPNLLVNGSSGIAVGMAT
NIPPHNLTEVIDGCLALIDNAELTVDDLMQYIPGPDFPTAGIINGRAGIIEAYRTGRGRI
YIRARVEVEDIDKSGNRQQLVVTELPYQLNKARLIEKIAELVKEKKIEGITELRDESDKD
GMRVVIELRRGEVPDVVLNNLYAQTQMQSVFGINVVALVDGQPKTMNLKDMLEVFVRHRR
EVVTRRTVYELRKARERGHILEGQAVALSNIDPVIELIKASPTPAEAKERLLATAWESSA
VEAMVERAGADSCRPEGLDEQYGLRDGKYYLSPEQAQAILELRLHRLTGLEHEKLLAEYQ
EILALIGELIRILTSPERLMEVIREELEKVKAEFGDARRTEIIASRQDLTIADLITEEER
VVTISHGGYAKSQPLAAYEAQRRGGKGKSATGVKDEDYVEHLLVANSHATLLLFSSKGKV
YWLRTFEIPEASRTARGRPLVNLLPLDEGERITAMLQIDLEALQQSAGADEDLDEEGVVI
EGEAVEVAEVEEVEEVEGETPELVAEPTGAYIFMATAFGTVKKTPLVQFSRPRSAGLIAL
RLEEGDTLIAAAITDGAKEVMLFSDAGKVLRFAESKVRTMGRTARGVRGMRLGKDQELIS
MLIPESGAQILTASERGFGKRTGLGKFPRRGRGGQGVIGMVTSERNGKLVGAIQVQDGEE
IMLISDQGTLVRTRVDEVSSSGRNTQGVTLIKLAKDETLVGLERVQEPTPVEDDELLEGE
EGVEVAEEGAEAPVTDAEEGSEE
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaactggccaaagaaatcctcccggtcaatatcgaagacgagctgaaacagtcc
tacctcgactacgcgatgagcgtgatcgtcgggcgtgcgctgccggatgcgcgcgatggc
ttgaagcccgtccaccgtcgtgtgctgtacgccatgagcgaactgggcaacgactggaac
aagccctacaagaaatccgcccgtgtggtcggtgacgtgatcggtaaataccacccgcac
ggcgacactgcggtgtacgacaccatcgtgcggatggcgcaggacttctccctgcgttac
ctgctggtcgacggtcagggcaacttcggttcggtggacggcgacaacgccgccgccatg
cgttacaccgaagtgcgcatgaccaagctggcccacgagctgctggccgacctggacaag
gaaaccgtggactgggtgccgaactacgacggcaccgagcagattccggcggtgatgccg
accaaggtgccgaacctgctggtcaacggctcgtcgggtatcgccgtgggcatggccacc
aacatcccgccgcacaacctcaccgaggtgatcgatggctgcctggcgctgatcgacaac
gccgagctgaccgtcgatgacctgatgcagtacatcccgggcccggacttccccactgcc
ggcatcatcaacggccgtgccgggatcatcgaggcctaccgtaccggtcgcgggcgcatc
tacatccgtgcccgcgtcgaggtcgaggacatcgacaagtccggcaaccgccagcagctg
gtggtcaccgagctgccgtaccagctgaacaaggcgcgtctgatcgagaagatcgccgag
ctggtcaaggagaagaagatcgaaggcatcaccgagctgcgtgacgagtccgacaaggac
ggcatgcgcgtggtgatcgagctgcgtcgtggcgaagtgccggacgtggtgctgaacaac
ctttacgcccagacccagatgcagagcgtgttcggtatcaacgtggtggcgctggtcgac
ggtcagccgaagaccatgaacctcaaggacatgctcgaggtgttcgtccgtcaccgccgt
gaagtggtgacccgtcggaccgtctacgagctgcgcaaggcccgcgagcgtggccacatc
ctcgaaggccaggccgtggcgctgtccaacatcgatccggtgatcgagctgatcaaggcg
tcgccgacgccggccgaggccaaggagcgtctgcttgccacggcctgggaatccagcgcg
gtggaagccatggtcgagcgcgccggcgccgactcctgccgcccggaagggctggacgag
caatacggtctgcgtgacggcaagtactacctgtcgccggaacaggcacaggccattctg
gagctgcgtctgcaccgcctgaccggcctggagcacgagaagctgctggccgagtaccag
gaaattctcgccctgatcggtgagctgatccgtatcctgaccagccccgagcgcctgatg
gaagtcatccgcgaggagctggagaaggtcaaggccgagttcggtgatgcccgtcgtacc
gagatcatcgcctcgcgtcaggacctgaccatcgccgacctgatcaccgaggaagagcgc
gtcgtcaccatctcccatggcggttatgccaagagccagccgctggcggcctacgaggcc
cagcgccgtggcggcaagggcaagtcggccaccggggtgaaggacgaggactacgtcgag
cacctgctggtcgccaacagccatgccaccctgctgctgttctccagcaagggcaaggtg
tactggctgcgcacgttcgagatccccgaggcgtcgcgcaccgcgcgcggccgtccgctg
gtcaacctgctgccgctggacgagggtgagcgcatcaccgccatgctgcagatcgacctc
gaggccctgcagcagagcgccggtgccgatgaggacctggacgaagaaggcgtggtgatc
gaaggcgaagccgtcgaagtcgccgaggtcgaggaagtcgaggaagtcgagggcgaaacc
cccgagctggtcgccgagccgacgggcgcctacatcttcatggccaccgccttcggtacc
gtgaagaagacgccgctggtgcagttcagccgtccgcgcagcgccggcctgatcgcactg
cgcctggaagagggtgacaccctgatcgccgccgcgatcaccgatggcgccaaggaagtc
atgctgttctccgacgctggcaaggtgctgcgtttcgccgaaagcaaggtacgcaccatg
ggtcgtactgcgcgcggtgtgcgtggcatgcgcctgggcaaggatcaggagctgatctcc
atgctcattcccgagtccggtgcgcagatcctcacggcatccgagcgcggcttcggcaag
cgcaccggcctgggcaagttcccgcgtcgtggccgtggtggccagggcgtcatcggcatg
gtgaccagcgagcgcaacggcaagctggtcggtgccatccaggtgcaggacggcgaggaa
atcatgctgatctccgaccagggcacgctggtgcgtacccgcgtcgacgaagtctccagc
tcgggtcgtaacacccagggcgtgacgctgatcaagctggccaaggatgaaaccctggtc
ggtctggagcgtgtgcaggagcctacgccggtcgaggacgacgaactgctcgaaggtgag
gagggcgtcgaggtcgccgaagaaggcgccgaggcaccggtcaccgacgccgaggaaggc
agcgaggaataa
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