Ectopseudomonas khazarica: JLK41_10500
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Entry
JLK41_10500 CDS
T07269
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pkh
Ectopseudomonas khazarica
Brite
KEGG Orthology (KO) [BR:
pkh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pkh03032
]
JLK41_10500
03036 Chromosome and associated proteins [BR:
pkh03036
]
JLK41_10500
03400 DNA repair and recombination proteins [BR:
pkh03400
]
JLK41_10500
DNA replication proteins [BR:
pkh03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
JLK41_10500
Chromosome and associated proteins [BR:
pkh03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
JLK41_10500
DNA repair and recombination proteins [BR:
pkh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
JLK41_10500
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Poly_export
HTH_IclR
SSPI
Motif
Other DBs
NCBI-ProteinID:
QTS88555
LinkDB
All DBs
Position
complement(2223226..2223504)
Genome browser
AA seq
92 aa
AA seq
DB search
MAITKDQLISDLAEAVSLPKATVRTLIDQLGEIVGDALENDGEITLPGIGKLKVSERPAR
TGRNPQTGKSIEIAAKKVVKLVPAKALSDALN
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcaccaaagaccaactgatcagcgacctggccgaggccgtttccctgccgaaa
gccactgtccgcaccctgatcgatcagctgggcgaaattgtcggcgacgcgctggaaaac
gacggtgagatcacccttcctggcatcggcaaactgaaggtgagcgagcgtccggcccgc
accggccgcaacccgcagaccggcaagagcatcgagatcgcggccaagaaagtggtcaag
ctggtgcctgccaaggcgctgagcgatgcgctgaactga
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integrated database retrieval system
