Ectopseudomonas khazarica: JLK41_10900
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Entry
JLK41_10900 CDS
T07269
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pkh
Ectopseudomonas khazarica
Brite
KEGG Orthology (KO) [BR:
pkh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pkh03000
]
JLK41_10900
Transcription factors [BR:
pkh03000
]
Prokaryotic type
Helix-turn-helix
Other families
JLK41_10900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
HTH_30
AAA_5
AAA_2
Mg_chelatase
AAA_3
PAS_4
nSTAND6
AAA_7
HTH_22
RsmI_C
PAS_7
AAA_16
HTH_28
HTH_17
HTH_36
TsaE
DUF2089
Motif
Other DBs
NCBI-ProteinID:
QTS88630
LinkDB
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Position
complement(2297018..2298853)
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AA seq
611 aa
AA seq
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MTEAARAQAHDTIIEQSWSRCRDYGLTHQSPPCFDPPPPGELSALLESRQALVQTTHQEV
LPYYGTILANSNCLIMLADEQGRLLQSWGDQRFIEPRQAAGFVAGASWLERYTGTNAIGT
ALSCGQAVHIQHDEHFLKANRFMTGSASPIFDEQRRMVAVLDVSSDSYLPPAHTLGMVKM
MSQSVENRLILKLFAEQYHLLSFNTSLDNLDSPWAGLVVFDEQGHVVSANRRADNLLGQP
LAYCAIEQLFDVPLQQLLNQPDNLPFNLRTSGHFRFHARVRRPTRPAPVQPRDFRPPLTS
RSEQEPPLHALNLGDARVDKAIRQAERLLEKDIPILVQGETGAGKEVFVKALHRSSSRAS
QAFIAVNCAAIPAELVESELFGYEKGAFTGASQKGHIGLIRKAHKGTLFLDEIGDMPLRV
QARLLRVLQERCVQPLGSSELHPVDVRLISATNRPLRQDIDNGQFRADLYYRISGLNLEL
PPLRERTDKAALFQKLWEQHREPRQWAGLSREVLELFQRHPWPGNLRQLSSVLRVALAMA
DDQPIRAEHLPDDFFTDLPGAAQQPSLPVADSDDLASQYQACGGNISYLARHLGLSRNTL
YKRLREQGVRP
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagctgcccgcgcgcaggcgcacgacaccatcatcgagcaatcctggtcgcgc
tgccgtgactacggcctgacccaccagagtccgccctgcttcgacccgccccctcccggt
gaactctcggccctgctggagagccgccaggcgctggtacagaccacccaccaggaagtg
ctgccctactacggcaccatcctggccaactccaactgcctgatcatgctcgccgacgag
cagggccggctgttgcagtcctggggcgaccagcgcttcatcgaaccgcgccaggccgcg
ggcttcgtcgccggcgccagctggctggagcgctacaccggcaccaatgccatcggcacc
gcgctcagctgcggccaggccgtgcacatccagcacgacgagcacttcctcaaggccaac
cgcttcatgaccggctcggcctcaccgatcttcgacgaacagcgacgcatggtcgccgtg
ctcgacgtgtccagcgacagctacctgccgcccgcgcacacccttggcatggtcaagatg
atgagccagtcggtggagaaccgcctgatcctcaagctgttcgccgagcagtaccacctg
ctcagcttcaataccagcctggacaacctcgacagcccctgggccgggctggtggtgttc
gacgagcagggccacgtggtctcggcgaaccgccgcgctgacaacctgctcgggcaaccc
cttgcctactgcgccatcgagcagctgttcgacgtgccgctgcagcagttgctcaaccag
ccggacaacctgcccttcaacctgcgcaccagcggccactttcgcttccacgcgcgggtg
cgccgccctacccggccagcccccgttcaaccccgcgacttccgcccgccgctgaccagc
cgcagcgagcaggagccgcccctgcacgcgctcaacctgggcgacgccagggtggacaag
gccattcgccaggccgagcgcctgctggagaaggacatcccgattctggtgcagggtgaa
accggcgccggcaaggaggtcttcgtcaaggccctgcaccgctccagctcacgcgccagc
caggcgttcatcgcggtcaactgcgccgccatcccggcggagctggtggagtcggagctg
ttcggctacgagaaaggcgccttcaccggcgccagccagaagggccatatcggcctgatc
cgcaaggcgcacaagggcacgctgtttctcgacgaaatcggcgacatgccgctgcgcgtc
caggcccgattgctgcgcgtcctgcaggaacgctgcgtgcagccgctgggcagcagcgag
ttgcacccggtggacgtgcgcctgatctccgcgaccaaccgcccgttgcgccaggacatc
gacaatggccagtttcgcgccgacctctactaccgcatcagcggcctgaacctggagctg
ccgccgctgcgcgaacgcaccgacaaggcggccctgttccagaagctctgggaacagcac
cgcgaacccaggcagtgggcggggctcagtcgcgaggtactcgaactgttccagcgccac
ccctggccgggcaacctgcgccagctcagcagcgtgctgcgcgtcgcgctggccatggcc
gacgaccagccgattcgcgccgaacacctgccggacgactttttcaccgacctgcccggc
gcggcgcagcagccgtcactgcccgtggcagacagcgacgacctggccagccagtaccag
gcctgcggcggcaatatctcctacctggcgcgccacctcggcctgagccgcaacaccctg
tacaagcgcctgcgtgaacagggcgtcaggccttga
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