Ectopseudomonas khazarica: JLK41_16065
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Entry
JLK41_16065 CDS
T07269
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
pkh
Ectopseudomonas khazarica
Pathway
pkh02020
Two-component system
pkh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pkh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JLK41_16065
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
JLK41_16065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pkh03021
]
JLK41_16065
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pkh02035
]
JLK41_16065
Transcription machinery [BR:
pkh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JLK41_16065
Bacterial motility proteins [BR:
pkh02035
]
Flagellar system
Flagellar assembly proteins
Stator
JLK41_16065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
HTH_30
MarR_2
GerE
Rv2175c_wHTH
Motif
Other DBs
NCBI-ProteinID:
QTS84836
LinkDB
All DBs
Position
complement(3370208..3370954)
Genome browser
AA seq
248 aa
AA seq
DB search
MTAASGLRMYNKAQAQDSQHQLIERYASLVKRIAYHLLARLPASVQVDDLIQAGMIGLLE
ASRKYDSSKGASFETFAGIRIRGAMLDEVRKGDWAPRSVHRNSRMVSDAIRAVEARTGRD
AKDHEVAAELQLSLEDYYGILGDTLGSRLFSFDDLLQDGEHGGLHEDAGHTHLEPSRDLE
DERFQAALAEAIAGLPERERLVLALYYDEELNLKEIGEVLGVSESRVSQLHSQCAARLRS
RLSEWRAG
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgacagcagcttctggacttcgtatgtacaacaaggcgcaggcgcaggactcccagcac
cagttgatcgagcgctatgcctccctggtcaagcgcatcgcctaccacctgctggcacgc
ctgccagccagcgtgcaggtcgatgatctgatccaggcggggatgatcgggctgctcgag
gcctcgcgcaaatacgactccagcaagggtgccagtttcgaaaccttcgccggcatccgc
attcgcggtgccatgctcgacgaggtacgcaagggcgattgggcgccgcgttccgtgcac
cgtaacagccgtatggtcagcgatgcgattcgtgcagtcgaagcccgaaccgggcgcgac
gctaaagatcacgaggttgctgccgaactccaattgagtctggaggattactacggcatt
cttggcgacactttgggcagccgcctgttcagcttcgacgacctcttgcaggatggcgag
cacggcgggttgcacgaagacgccgggcacacccacctcgaaccttcgcgggacctcgaa
gacgaacgctttcaggcggctttggccgaggccatcgccggtttgcccgagcgtgaacgt
ctcgtgctggcgctgtattacgatgaagaactgaacttgaaagaaatcggtgaagtgctg
ggggttagcgagtcacgtgtgagccaactgcacagtcagtgcgcggcacgcctgcgctcg
cgactgagtgaatggcgcgcaggctga
DBGET
integrated database retrieval system
