Ectopseudomonas khazarica: JLK41_17165
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Entry
JLK41_17165 CDS
T07269
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pkh
Ectopseudomonas khazarica
Brite
KEGG Orthology (KO) [BR:
pkh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pkh03016
]
JLK41_17165 (truD)
Enzymes [BR:
pkh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
JLK41_17165 (truD)
Transfer RNA biogenesis [BR:
pkh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JLK41_17165 (truD)
Prokaryotic type
JLK41_17165 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QTS85040
LinkDB
All DBs
Position
complement(3640170..3641228)
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AA seq
352 aa
AA seq
DB search
MNEQQLLGPRAHGEACGRAVLKATAEDFQVDEVLDIPLTGQGEHLWLWVEKRGLNTEDAA
RRIARAAGLPLKAVSYAGLKDRQALTRQWFSLHLPGKADPDLAAAESPALSILKRERHNR
KLQRGAHSANGFILRLTALQADREALEQRLRQIAEQGVPNYYGLQRFGFDGGNLQEARRH
AEREELPVQRNLRSRLLSSARSYLFNRVLAERVAAGSWNQACVGDLLAFTTSRSFFMAGE
AECQDPRLAILDLHPTGPLWGEGLPPTAQAVNELEQAVGSEEPALLAWLSKAGMAHERRI
LRLPIQSLTWHYPEPDILQLAFVLPAGSFATVVVRELVDLMPTGQTDTPCEF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagcagcagctgctgggcccgcgcgcccatggcgaggcctgcgggcgcgccgtg
ctcaaggccaccgccgaggacttccaggtcgatgaagtgctggacattccgctcaccggc
cagggtgaacacctctggctgtgggtggagaagcgcggcctgaacaccgaggatgccgcc
cgtcgcatcgcccgcgctgcggggctgcccctcaaggcggtcagctacgccggcctcaag
gatcgccaggcactcacccggcaatggttcagcctgcacctgccaggcaaggccgacccc
gatctggcggccgccgaaagcccggcactgagcatcctcaagcgcgagcgacacaatcgc
aagctgcagcgcggtgcccattcggccaacggcttcatcctgcgcctgaccgcgctgcag
gccgaccgcgaggcgctggagcagcgcttgcggcagatcgccgaacagggcgtgcccaac
tattacgggctgcagcgtttcggcttcgacggtggcaacctgcaggaggcgcggcgccat
gccgagcgcgaggagctgccggtgcagcgcaacctgcgttcgcggctgctgtcttcggca
cgcagctacctgttcaaccgtgtgctggccgagcgggtcgccgcagggagctggaaccag
gcgtgcgtcggcgatctgctggccttcaccaccagccgcagcttcttcatggccggcgag
gccgagtgccaggatccgcgcctggcgatcctcgatctgcaccccaccgggccgctctgg
ggcgaagggctgcccccgaccgcgcaggcggtgaacgagctggagcaggcggtcggcagt
gaggagccggcgctgctcgcctggttgagcaaggcgggcatggctcacgaacgacgcatt
ctgcgcctccccattcagagccttacgtggcattatccggaacccgatattctgcaactt
gcattcgtcctgccggccgggagtttcgccaccgtcgtggtgcgcgagctcgtcgacctc
atgccgacagggcagacggatactccatgcgaattctga
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