Ectopseudomonas khazarica: JLK41_19450
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Entry
JLK41_19450 CDS
T07269
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pkh
Ectopseudomonas khazarica
Brite
KEGG Orthology (KO) [BR:
pkh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkh03400
]
JLK41_19450 (sbcD)
DNA repair and recombination proteins [BR:
pkh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JLK41_19450 (sbcD)
Archaeal homologous recombinant proteins
JLK41_19450 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
QTS85476
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All DBs
Position
complement(4125894..4127123)
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AA seq
409 aa
AA seq
DB search
MSLRVLHSSDWHLGQHFMGKTRQAEHQAFCAWLLEQVRAHAVDVLLIAGDVFDTGAPPSY
AREQYYRLVVELRDAGCALVVLGGNHDSPAMLGESRSLLAQLGTQVVPAVGLDLAEQVLV
LNDRSGQPGAILCATPFIRPRDVLASQAGQSAQDKQQSLQQAIAAHYQALHALALERRNQ
IGQPLPIIASGHLTTVGASASESVREIYVGSLEAFPTSAFPPADYIALGHIHRPQKVGGL
EYVRYSGSPIALSFDETRQQKEVLLLEFGEASLQSITPLAVPVFQPMASLRGSLKELAGA
IAEVAAQGTGERPVWLEVQVSSDDYLSDLQGRISALCEGHAVEVLRIRRERGNASASLAN
AARETLDELSVEDVFARRLQQEVLDEADSQRLLERYRQVLEAVQERQER
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgcgcgtgctgcacagctccgactggcacctgggccagcacttcatgggcaag
acccgccaggccgagcaccaggccttctgcgcctggctgctggagcaggtgcgggcgcat
gccgtggatgtgctgctgatcgccggtgacgtattcgacactggtgcgccgcccagctac
gcccgcgagcagtactaccgcctggtggtcgagctgcgcgacgccggctgcgcgctggtg
gtcctgggtggcaaccacgattcgccggccatgcttggcgaaagccgcagcctgctggcg
cagctgggcacccaggtggtgccggcggtgggcctcgacctggccgagcaggtgctggtg
ctgaacgatcgcagcggccagccgggcgccatcctctgcgccacccccttcattcgtccg
cgcgacgtgctggccagccaggccgggcagagcgcacaggacaagcagcagtcactgcaa
caggccattgccgcgcactaccaggccctgcacgcgctggcgctggagcggcgcaaccag
atcgggcagcccctgccgatcatcgccagcggccacctgaccacggtcggcgccagcgcc
agtgagtcggtgcgcgagatctacgtcggcagcctggaggcctttcccaccagtgctttc
ccgcccgccgactacatcgccctgggtcacatccatcggccgcagaaggtcggtggcctg
gagtatgtgcgctacagcggttcgccgatcgccctgtcgttcgatgaaacgcgccagcag
aaggaagtgctgctgctggaattcggcgaggccagcctgcagtcgatcacgccgctggcc
gtgccggtgtttcagcccatggccagcctgcgtggctcgctcaaggaactggccggcgcc
atcgccgaggtcgctgcccagggcacgggcgagcggccggtgtggctggaggtgcaggtc
agcagcgacgactacctcagcgacctgcaaggccgcatcagcgccctctgcgaggggcat
gccgtggaggtgctgcgcatccgtcgcgagcgtggcaacgccagtgccagcctggccaac
gccgcacgggagacgctggacgaattgtccgtcgaggatgtcttcgccaggcgcctgcaa
caggaggtactggacgaggcggacagccagcgcctgctcgagcggtatcgccaggtgctg
gaggccgtgcaggaacgtcaggagcgctag
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