Ectopseudomonas khazarica: JLK41_19915
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Entry
JLK41_19915 CDS
T07269
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pkh
Ectopseudomonas khazarica
Pathway
pkh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pkh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JLK41_19915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pkh03019
]
JLK41_19915
Enzymes [BR:
pkh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
JLK41_19915
Messenger RNA biogenesis [BR:
pkh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
JLK41_19915
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
QTS85562
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All DBs
Position
4229138..4230532
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AA seq
464 aa
AA seq
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MLKKLFKSFRSPLRRVPRPRSTPEVLSSSQHPLKRNEISRHAISVVERLQRAGYQAYLVG
GCVRDLLLDIDPKDFDVATSATPEQVRAEFRNARVIGRRFKLVHVHFGREIIEVATFRAN
HPQGEEEENSNLAARHESGRILRDNVYGTLEDDAQRRDFTINALYYDPTQEHILDYARGM
HDVRNHLVRLIGDPEQRYLEDPVRMLRAVRFAAKLDFDIEKHSAAPIRRLAPMLRDIPAA
RLFDEVLKLFLAGYAEYTFDLLLEHDLFAQLFPASGEALKRNPEYTEKLIRQALINTDER
IHDGKSVTPAFLFAALLWPALPARVLQLQDKGMPPIPAMQEAAHTLIAEQCQRIAVPKRF
TIPIREIWDMQERLPRRSGKRADLLLENPRFRAGYDFLLLRELAGENTGGLGEWWTDYQD
ANDSERRQMIRDLAGKGESTASAAPRKRRRNNNRRKRGNEGSGE
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaaagctgttcaagtctttccgctcacctctgcgccgtgtgccacgcccacgc
agcacgcccgaagtgctgagcagtagccaacatccactcaagcgcaacgagatcagtcgg
cacgccatcagcgtggtcgagcgcctgcagcgcgccggctaccaggcctacctggtcggt
ggttgcgtgcgcgacctgctgctggatatcgaccccaaggatttcgacgtagcgaccagc
gccacccccgaacaggtgcgtgcggagttccgtaacgcccgggtgatcggccgtcgcttc
aagctggtacacgtgcacttcggtcgcgagatcatcgaggtcgcgaccttccgcgccaat
cacccgcaaggcgaggaagaggaaaacagcaacctcgccgcgcgccacgagagcggtcgc
atcctgcgcgacaacgtctacggcaccctggaagacgacgcccagcgccgtgacttcacc
atcaacgcgctgtactacgacccgacccaggagcacatcctcgactacgcccgaggcatg
cacgatgtgcgcaaccacctggtgcgtctgatcggcgatcccgagcaacgctacctggag
gacccggtgcgcatgctgcgagcggtgcgcttcgccgccaagctcgacttcgacatcgag
aagcacagcgccgcgccgatccgccggctggcgccaatgctgcgcgacattccagccgcc
cgcctgttcgacgaggtcctcaagctgttcctcgccggctacgccgaatacaccttcgac
ctgctgctggagcatgacctgttcgcccagctcttcccggccagtggcgaggcgctcaag
cgcaaccccgaatacaccgagaagctgatccgccaggcgctgatcaacaccgacgagcgc
atccatgacggcaagtcggtcaccccggcattcctcttcgccgccctgctctggccggcg
ctgccagcccgtgtcctgcagctgcaggacaaaggcatgccgccgattccggcgatgcag
gaagccgctcacacgctgatcgccgagcagtgccagcgcatcgccgtgcccaagcgcttt
accatcccgattcgcgagatctgggacatgcaggagcgcctgccgcgccgcagcggcaag
cgtgccgacctgctgctggagaacccgcgcttccgtgccggttacgatttcctcctgctg
cgtgaactggccggcgaaaacaccggcggcctgggtgagtggtggacggattaccaggac
gccaacgacagcgagcgccggcagatgatccgcgaccttgcaggcaagggcgaaagcacc
gccagcgccgcgccgcgcaagcgccgccgcaacaacaaccggcgcaagcgcggtaacgaa
ggcagcggcgagtga
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