Ectopseudomonas khazarica: JLK41_20700
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Entry
JLK41_20700 CDS
T07269
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pkh
Ectopseudomonas khazarica
Pathway
pkh03030
DNA replication
pkh03430
Mismatch repair
pkh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pkh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JLK41_20700
03430 Mismatch repair
JLK41_20700
03440 Homologous recombination
JLK41_20700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pkh03032
]
JLK41_20700
03400 DNA repair and recombination proteins [BR:
pkh03400
]
JLK41_20700
Enzymes [BR:
pkh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JLK41_20700
DNA replication proteins [BR:
pkh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JLK41_20700
DNA repair and recombination proteins [BR:
pkh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JLK41_20700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QTS85715
LinkDB
All DBs
Position
complement(4398729..4399331)
Genome browser
AA seq
200 aa
AA seq
DB search
MESIAVIDFETTGVSPAQARATEIGVAIIEDGRIVERYQSLMYSGAWVPPFIEQLTGISN
AMLRQAPPSEQVMNEVADFIGERPLLAHNAAFDQKFWDAELARVSRRRAQPFACSLLLSR
RLLPEAPSHKLGNLNSWAGLPDTGRAHRALADAEMAANLTLHLFDLLRDRHGRHQADHAF
LCQLQSLSAAKVRTLLATAS
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
ttggaatccattgccgtcatcgacttcgaaaccaccggggtttcacctgcccaggcgcgt
gccaccgagatcggcgtggcgatcatcgaggacgggcgcatcgtcgagcgctatcagagc
ctgatgtacagcggcgcctgggtgccgcccttcatcgagcagctcaccggcatcagcaat
gccatgctgcgccaggcgccgccttccgagcaggtgatgaacgaggtggccgacttcatc
ggcgagcggccgctgctggcgcacaacgcggccttcgaccagaagttctgggatgccgaa
ctggcccgcgtgagccggcggcgcgcgcagccgttcgcctgttcgctgctgctttcgcgg
cgcctgctgccggaggcgccgagccacaagctgggcaacctcaacagctgggccggcctg
ccggataccggacgtgcccaccgggccctggccgatgccgagatggccgccaacctgacc
ctgcacctgttcgacctgctgcgtgaccggcatggccggcaccaggccgatcatgccttc
ctctgccagctgcagagcctgtcggcagccaaggtgcgcacgctgctggcgactgccagc
tga
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