Ectopseudomonas khazarica: JLK41_22135
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Entry
JLK41_22135 CDS
T07269
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pkh
Ectopseudomonas khazarica
Pathway
pkh03420
Nucleotide excision repair
pkh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pkh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JLK41_22135
03430 Mismatch repair
JLK41_22135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkh03400
]
JLK41_22135
Enzymes [BR:
pkh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JLK41_22135
DNA repair and recombination proteins [BR:
pkh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JLK41_22135
MMR (mismatch excision repair)
Other MMR factors
JLK41_22135
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
UvrD_C
AAA_30
AAA_16
120_Rick_ant
Motif
Other DBs
NCBI-ProteinID:
QTS85980
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Position
4688776..4690509
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AA seq
577 aa
AA seq
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MTETAKNPALIAAQEAQRKINEALDAGHSFRLEAGAGAGKTYSLVAALKRLISERGPALV
QAGQKVACITYTEVARNEIAQEIEDHPAILVSTIHGFSWAFLRQFQKALRDLVGEMEDRK
EKVEQGGGVGSKPVDYDLGFFGVEMDRVTLSHDDIPEMMAKLLQNEKFRRILSQQFPVIF
IDEYQDTHRQFMEAITEHFLKSATGPLVGLFGDHWQTIYRSEYELAEYPIKEIAKGSNFR
SVPAVVDVLNKLRPELCQAVHDPEAKGEARFFHTNAYTGQRTNDRHSKEDLPPDVARHTR
ENLMQRLKSEGWDLSKTKVLMLTHNALAAEQGYPKLAEIYSGRNDLFAKKEDPAIKFFAE
VVEPVCAAYGASRYGDMFKTLGSVPAITKHEDKACWRREMDALRELRAEGTVGQVIDHLK
TTRRPPPPDRVLRLDEELRALNGAPIPEDASALKRYSKLRDITYGEVVEVVKFIEKQTPF
ATQHSVKGAEFENVLVVLGGGWNHYNWPQLLELIETNALNAKNTKGFYRARNLFYVSISR
PMIRLAVLATQSMSDTALKGIKSLFGSENVEELAVFD
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgactgagactgccaagaatcccgcactcatcgctgcacaagaggcccaaagaaagatt
aatgaggcccttgatgcgggtcacagctttcgccttgaagctggtgccggcgcaggcaag
acgtattccctggtcgccgcactgaagcgattaatttcagagcgaggccccgccttggtt
caagcagggcaaaaggtagcctgcattacctacaccgaggttgcccgtaatgagattgcc
caggagattgaggatcatcccgccattctggtcagtactatccacggcttctcgtgggca
ttcctacgccagtttcagaaggcgctgcgtgacctcgtgggggaaatggaggatcgaaaa
gagaaagtcgaacaaggcggaggtgtcggctcaaagcccgtagactacgacctaggattc
tttggcgtcgaaatggacagagtcacgctgagtcacgacgacatcccggagatgatggcc
aagcttctgcagaatgaaaagtttcggcgcatcttgagccagcagtttccagtgattttt
atcgacgagtatcaagatacccatcgacaattcatggaagcgattaccgagcacttcttg
aagtcggccaccggccccctcgttggtctatttggagaccactggcaaaccatttatcga
agtgaatacgagcttgcggagtatccaatcaaagagattgccaaaggctccaactttcga
tcggtacccgcagtcgtagatgttctgaacaagctgcgccctgaactatgccaagccgtt
catgaccccgaggcaaagggcgaggcgcgcttctttcacaccaacgcctacacgggtcaa
cggacaaatgacaggcactccaaagaggatctaccacctgatgtggcccggcacactcgg
gaaaacttgatgcaacggctgaaatccgaggggtgggatctgagcaaaacgaaggtactg
atgctcacccacaacgcactagctgctgaacagggctaccccaagctcgccgagatatac
agcggccgcaacgatctgttcgccaaaaaggaagacccggcgatcaagttctttgcagaa
gtcgttgaacccgtatgtgcagcgtacggcgcatctcgctacggcgatatgttcaagacg
ctcggctccgttcctgcgataaccaagcatgaagacaaagcctgctggcgtcgcgaaatg
gacgccctccgggagctgcgcgcagaaggtacagtcggacaggtcattgatcacctgaag
acaacgagacgcccaccgccaccagaccgcgtattgcggctcgacgaagagctcagagca
ctaaacggcgcccccatacctgaggatgcatccgcacttaagcggtacagcaagctgcgg
gacattacttacggagaggttgttgaggttgtcaaattcatcgaaaagcagacccccttt
gccacgcaacatagtgtcaagggtgccgagttcgagaacgttcttgtagtactgggaggc
ggctggaaccactacaactggccacaactactagagctcattgagacaaatgcgctgaat
gcaaagaacacgaagggcttctatcgcgctcgcaacctcttttatgtgtctatctcgcga
ccaatgatacgactcgccgtccttgctacacagagcatgtcggataccgctttaaaaggg
ataaaaagtctatttggaagcgaaaatgtggaggaacttgccgtcttcgattga
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