KEGG   Ectopseudomonas khazarica: JLK41_23020
Entry
JLK41_23020       CDS       T07269                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
pkh  Ectopseudomonas khazarica
Pathway
pkh03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pkh00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    JLK41_23020 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pkh02044]
    JLK41_23020 (tssM)
Secretion system [BR:pkh02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   JLK41_23020 (tssM)
SSDB
Motif
Pfam: IcmF-related IcmF-related_N IcmF_C IcmF_helical
Other DBs
NCBI-ProteinID: QTS86148
LinkDB
Position
complement(4883437..4887048)
AA seq 1203 aa
MMRRLFHLLFNRYVFVALGLIALVLLIWFIGPLFAFAQWRPLEPVEVRLWVIGVILGLLA
LRLLIGVWRRQQLNVRLLNAIASARESKSGEPQPGDAALQELRGNFEQALDRLKQVRFNE
QKPGWFSGLRRTFVYQIPWYVFIGAPGSGKTTALVNSGLRFPLADEFGKGSIKGVGGTRN
CDWWFSDEAVLLDTAGRYATHESDAQADKAEWEGFLALLKKFRPRQPLNGALLTISVSDL
LSESEADRQRHAARLRARLAELHGVLGIDFPVYVLVTKADLLGGFNEYFNAMGKEERAQV
WGVTLPYATGSKPQGEALGQTLQNELELLSHRLFDGLPEQLLNEQDTSRRACAYALPQHF
HGLIPVLRQMLQDVFSESRFAQHAMLRGLYFTSGTQEGTPFDRVLGGLSRSLGFDARIAL
HATQGASGKSYFLQDLLRKVIFPEAYLAGRNERAERRERMLGIAGHCAVLLALGLAIGAW
AFSTGNNTRYINLVDQRTENMAERLQVMAVSEGESLLELVPVLSELNALAAGPDFPASAP
PLSYTYGLYQGDKLDAAVQIAYQAALERALLPRIVRRLEALLQDTPDGNLELGYETLKAY
LMLNDPSRYDSEALEAFVRTEWQHSLPESVSNDQRDQLFAHLHNLLAGKTVSSPYPMNED
LVQRKREQLAAFSPAQRAYGRLKLRLMSDSAGEFSIADAGGPQATLVFARASGKPLTQGI
PALFTRDGYHKRFLPEAATVLNLLEREEDWVLGRLQRSLDDQATDLVKGAAMHDVKRLYL
HEYVRLWDAYLADIRLVDTLSMNQSMDVARILSAPDSPLAQFLRAVSRETTLLKKETATN
QQYSLVGQASNRVKAAAADLERVFGPSEITRPNAGNIQLERIVDDHFEPIRRLVTSDGGS
MPIQSVLRLFNEMYMSLSSTDAALRNGVVASAGMAQGSDALTRIRAEAAYLPIPLRGMIE
ELADSSSSQSGGSSARLLAGQIDKSLGAFCRQATGGRYPFRRSSAEDVTLADFSRLFTYG
GLFDRFFQDNLAANTDMSGNTWVLRQPGGVETPLPAFQRAARIRDVFFPSGTRNPELSFS
FRVLEMDARISRLTLDFDGQVFHYSHGPQIPQQVTWPGPRGSNQVRLELSGQSAPIYLVK
NGPWAAMRLFDEGEVRQGSGPERFVDTLMIQGHKVVLEVTASSVQNPFRLRELASFSCPG
RAG
NT seq 3612 nt   +upstreamnt  +downstreamnt
atgatgcgccggctgttccaccttcttttcaatcgttacgtgttcgtggcgctggggctg
attgccctggtgctgctgatctggttcatcggcccgctgttcgccttcgcccagtggcga
ccgctagaacccgtggaggtgcggctctgggtgatcggtgtgatcctcgggttgcttgcc
ttgcggctgctgatcggtgtctggcggcgccagcagctcaacgtgcgcctgctcaacgcc
attgccagtgcgcgcgagagcaagagtggcgaaccgcagcccggcgatgcggccttgcaa
gagctgcgcggcaatttcgaacaggccctggaccgactcaagcaggtgcgcttcaacgag
cagaagccgggctggttctctggcctgcggcgcacctttgtctaccagattccctggtac
gtcttcatcggcgcaccgggctcgggcaagaccaccgccctggtcaacagcggcctgcgc
ttcccgctggctgacgagtttggcaagggcagcatcaagggcgtcggcgggacccgcaac
tgtgactggtggttctccgacgaggctgtgctgctcgacaccgctggacgttatgccacc
catgagagcgacgcgcaggcggacaaggccgagtgggaaggtttcctggcgttgctgaag
aagttccgcccgcgtcagccgctcaacggtgcattgctgaccatctccgtgtcggacctg
ctcagcgagagtgaggctgatcgccagcgccatgcggcgcggttgcgcgcacgcctggcc
gagctgcacggtgtgctggggatcgacttcccggtgtacgtactggtgaccaaggccgac
ctgctcggcggtttcaacgaatacttcaatgccatgggcaaggaagagcgtgcccaggtc
tggggcgtgacgctgccctacgccactggcagcaagccgcagggcgaggctctggggcag
acgctgcagaacgagctggaactcctctcgcatcgtctgttcgacggcctgcctgagcag
ctgctcaatgaacaggacacctcgcgccgggcctgcgcctatgccttaccgcaacatttt
cacggacttattccggtgctgcggcagatgcttcaggatgtcttcagcgagagccgcttc
gcccagcacgccatgttgcgtggtctgtatttcaccagtgggacgcaggagggcacgccg
ttcgaccgtgtgctcggcggactgagtcgcagcctgggcttcgatgcccggatcgctctg
catgccacgcaaggcgcgtcgggcaagagttacttcctgcaggacctgctgcgtaaggtg
atctttcccgaggcctacctggccgggcgcaacgagcgggccgagcgtcgcgagcgcatg
ctcggcatcgccgggcactgtgcggtgctgctggcgctgggcctggccatcggtgcctgg
gccttcagcacgggcaacaacacccgctacatcaacctggtggaccagcgcaccgagaac
atggccgagcggctgcaggtcatggccgtctctgaaggcgagagcctgctcgaactggta
ccggtgctgagcgagttgaacgccctcgccgccggcccggacttccccgccagcgcgccg
ccgttgtcctacacctatggcctctaccagggcgacaagctcgacgccgcggtgcagatc
gcctaccaggcggcgctggagcgagcactgctgccgcgcatcgtgcggcgtctcgaagcg
ctgttgcaggacaccccagacggcaacctcgaactgggctacgagacgctcaaggcctac
ctgatgctcaacgacccctcgcgctatgacagcgaggcgctggaagccttcgtgcgcacg
gagtggcagcacagcctgccggagtcggtgtccaacgaccagcgtgaccagctgttcgcc
cacctgcacaacctgctcgcgggcaagaccgtttcctcgccctacccgatgaacgaggac
ctggtgcagcgcaagcgcgagcaactggctgccttctcgccggcgcagcgtgcctacggc
cggctcaagctgcgtcttatgagcgacagtgccggcgagttcagcatcgccgatgcgggc
gggccgcaggcgactctggtattcgcccgggcgagcggcaagccgctgactcagggaatt
cctgcgctcttcacgcgtgatggctaccacaagcgttttctgcccgaggcggccacggtg
ctcaacctgttggagcgggaagaggactgggtactcggccgtctgcaacgctcgctggac
gaccaggccacggacctggtcaagggcgccgcgatgcatgacgtcaagcgcctctacctg
cacgagtacgtgcgcctgtgggatgcctacctggccgacattcgcctggtcgataccctg
tcgatgaaccagagcatggacgtggcgcgcatcctctccgcgccggattcgcccctggcg
cagttcctgcgcgcggtatcacgggaaaccaccctgttgaagaaggagaccgccaccaac
cagcagtactcgctggtcggccaggcctccaatcgagtcaaggctgccgccgccgacctc
gagcgggtgttcgggccttcggaaatcacccggccgaatgctggcaacatccagctcgag
cgcatcgtcgacgatcacttcgagccgatccgccgcctggtcaccagcgatggtggcagt
atgcctatccagtcggtgctgcgcctgttcaacgagatgtacatgagcctctcgagcacc
gatgcggcactgcgcaacggcgtggtcgcctcggccggcatggcgcaaggcagcgacgcc
ctgacgcgcatccgcgccgaggccgcctacctgccgattccgctgcgcgggatgatcgaa
gagctggccgactccagcagttcacagtccggtggcagctccgcgcgtctgctggccggg
cagatcgacaagtcactgggggcgttctgccgccaggccaccggcgggcgctatccattc
cgccgttcctcggccgaggacgtgaccctggccgacttctcgcggctgttcacctacggc
ggcctgttcgatcgcttcttccaggacaacctggcagccaataccgatatgtccggcaat
acctgggtgctgcgccagccgggcggggtggaaactccgctaccggcgttccagcgtgcc
gcgcggattcgcgatgtgttcttcccctccggtacccgcaacccggagctgtcgttctcg
ttccgggtgctggagatggatgcccggatcagccggctgacgctcgatttcgacggccag
gtgttccattactcgcacggcccgcagataccgcaacaggtgacctggccagggccgcgt
ggcagcaaccaggtgcgcctggagcttagcggccagtccgcaccgatctacctggtgaaa
aacggtccctgggcggccatgcgtctgttcgacgagggcgaggtgcgccagggttccggg
ccggagcgtttcgtcgacaccctgatgatccagggccacaaggtggtgctcgaggtgacc
gccagcagtgtgcagaacccgttccgcctgcgtgagctggccagcttctcctgcccgggg
cgtgccggatga

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