Ectopseudomonas khazarica: JLK41_23165
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Entry
JLK41_23165 CDS
T07269
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
pkh
Ectopseudomonas khazarica
Pathway
pkh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pkh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JLK41_23165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pkh03019
]
JLK41_23165
Messenger RNA biogenesis [BR:
pkh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
JLK41_23165
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
NUDIX_2
Motif
Other DBs
NCBI-ProteinID:
QTS86176
LinkDB
All DBs
Position
complement(4926086..4926565)
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AA seq
159 aa
AA seq
DB search
MIDSDGFRPNVGIILTNDVGQVLWARRINQDAWQFPQGGINDRESPEEALYRELNEEVGL
EEQDVKILACTRGWLRYRLPQRLVRTHSQPLCIGQKQKWFLLRLTGAEERVRMDLTGKPE
FDGWRWVSYWYPLGQVVTFKREVYRRALKELAPRLIVRD
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgactctgatggttttcgcccgaatgtcggcatcatcctgaccaatgatgtcggc
caggtgctctgggccaggcgcatcaatcaggatgcctggcagtttccgcaaggcggcatc
aatgatcgcgaatcgcccgaagaggcgttgtaccgcgaactcaatgaagaagtcgggctc
gaagagcaggatgtgaagatcctcgcctgcacccgaggctggttgcgttatcgtctaccg
cagcgcctggtgcgcacgcacagccagcccctgtgcatcgggcagaagcagaagtggttc
ctgctgcgcctgaccggtgccgaggagcgcgtacgcatggacctgaccggcaagcccgaa
ttcgatggctggcgctgggtcagctactggtacccgctgggccaggtggtcacattcaag
cgcgaggtctatcgccgcgcgctcaaggaactcgccccgcgcctgatcgtgcgcgactga
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