Ectopseudomonas khazarica: JLK41_23440
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Entry
JLK41_23440 CDS
T07269
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pkh
Ectopseudomonas khazarica
Pathway
pkh00521
Streptomycin biosynthesis
pkh00523
Polyketide sugar unit biosynthesis
pkh00525
Acarbose and validamycin biosynthesis
pkh00541
Biosynthesis of various nucleotide sugars
pkh01055
Biosynthesis of vancomycin group antibiotics
pkh01100
Metabolic pathways
pkh01110
Biosynthesis of secondary metabolites
pkh01250
Biosynthesis of nucleotide sugars
Module
pkh_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pkh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
JLK41_23440 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
JLK41_23440 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
JLK41_23440 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
JLK41_23440 (rfbB)
00525 Acarbose and validamycin biosynthesis
JLK41_23440 (rfbB)
Enzymes [BR:
pkh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
JLK41_23440 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
KR
NAD_binding_10
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
QTS86229
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All DBs
Position
4981464..4982525
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AA seq
353 aa
AA seq
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MRILITGGAGFIGSALIRHLIRQTDHEVLNLDKLTYAGNLESLETVADSPRYRFVQADIA
DSEQVAATLAEFQPDAVMHLAAESHVDRSIDGPAAFIQTNIVGTYSLLESVRSYWLGLDA
ERQAAFRFHHISTDEVYGDLHGVDDLFSETTPYAPSSPYSASKAASDHLVRAWLRTYGLP
VLLTNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQVRDWLYVEDHARALLKVVS
EGQVGETYNIGGHNEQKNLDVVHAICALLEELAPQKPAGIARYEELITYVQDRPGHDLRY
AIDASKIERELGWVPEETFASGLRKTVQWYLDNLDWCRRVQDGSYQGQRLGAL
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcctgatcaccggcggtgccggtttcatcggttcggccctgattcgccacctg
atccggcagactgatcacgaggtgctcaacctcgacaagctgacctatgccggcaacctg
gagtcgctggagacagtcgccgacagcccgcgctaccgtttcgtgcaggcggacatcgcc
gatagtgagcaggtcgccgcgacgctggccgagttccagccggatgccgtgatgcacctg
gccgcggaatcgcatgtcgaccgctccatcgacggccctgccgcattcatccagaccaac
atcgtcggcacctacagcctgctggaaagtgtccgcagctactggctcgggctcgatgcc
gaacgccaggccgccttccgcttccaccacatctccaccgacgaggtgtacggcgacctg
cacggcgtcgacgacctgttcagcgagaccacgccctacgcccccagctccccgtactcg
gccagcaaggcggcgtccgaccacctggtgcgcgcctggctgcgcacctatggcctgccg
gtgctgctcaccaactgctcgaacaactacggcccgtaccacttccccgagaagctcatc
ccgctgatgatcctcaacgccctggccggcaagccactgccggtctacgggaatggccag
caggtgcgcgactggctctatgtcgaagaccacgcccgcgcgctgctcaaggtggtcagc
gagggtcaggtgggcgagacctacaacattggcgggcacaacgagcagaagaatctcgac
gtggtgcatgccatctgcgcgctgctggaagaactggcgccgcagaaaccggccggcatt
gcccgctacgaggagctgatcacctacgtgcaggatcgccccggtcatgacctgcgctac
gccatcgacgccagcaagatcgagcgcgagctgggttgggtaccagaggaaaccttcgcc
agcggtctgcgcaagacggtgcagtggtacctggacaacctcgactggtgccgccgcgtg
caggatggtagctatcagggccagcggctcggcgcactttaa
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