Ectopseudomonas khazarica: JLK41_24265
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Entry
JLK41_24265 CDS
T07269
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
pkh
Ectopseudomonas khazarica
Pathway
pkh02020
Two-component system
pkh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pkh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JLK41_24265
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
JLK41_24265
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pkh02022
]
JLK41_24265
02035 Bacterial motility proteins [BR:
pkh02035
]
JLK41_24265
Two-component system [BR:
pkh02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
JLK41_24265
Bacterial motility proteins [BR:
pkh02035
]
Flagellar system
Flagellar assembly proteins
Others
JLK41_24265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
Mg_chelatase
AAA
AAA_16
AAA_22
HTH_30
HTH_1
AAA_19
AAA_7
AAA_3
HTH_24
TIP49
ATPase
Motif
Other DBs
NCBI-ProteinID:
QTS86382
LinkDB
All DBs
Position
complement(5162924..5164333)
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AA seq
469 aa
AA seq
DB search
MQHSTQTVSYACDELFDEQLGQQHIVVVGQADAASERLLTGGLLRQGFRVRRFANCLELD
PHALQGASLVLVFVSSLAGSTLYAQVGAILRQVGRVGVVPVVEYADQEKAATLLELGCVD
YLLAPFSEAQLSALLRRQESASAGEEGFVSCSQAGRRLLAMAQRVAMTRAPILITGETGT
GKELMARYIHRFSAQDDAPFIAVNCAAIPEQMLESILFGHEKGAFTGAVNAQPGKFELAN
GGTLLLDEIGELPLGLQAKLLRVLQEQRVERLGGRREIALDVRIIAATNRDLQQEVAQGR
FRADLMFRLDVLPLHISPLRERKEDVLALARRFIRQYAPQDARHELLTEDACRALLAHDW
PGNVRELENCLQRALILRNGLYIQAQDLGLSLPPSSAPEPAPRLQPQALEGGKAALRASG
KWAEYQHVIDTIRRFGGHKTKAAESLGMTPRALRYRLNAMREQGVQIPV
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
ttgcagcactcaactcaaacggtaagttacgcctgcgacgagctgttcgatgaacagctg
gggcagcaacatatagtcgtggtcggccaggccgacgcggccagcgagcgtctgttgacg
ggcggtctgctgcgccagggcttccgtgtccggcgtttcgccaactgccttgaactcgac
ccgcatgcgctgcaaggcgccagcctggtgctggtgttcgtcagcagcctggccggcagc
accctttatgcacaggtgggcgcgatcctgcgccaggtcggtcgcgtcggcgtggtgccg
gtggtggagtatgccgatcaggagaaggccgcgacgctgctcgaactgggctgcgtcgac
tacctcctggcacccttcagcgaggctcagctcagcgcactgttgcgtcgccaggaatcg
gccagcgccggcgaggaaggtttcgtctcctgctcgcaggccgggcgtcgtctgctggcc
atggcgcaacgcgtggcgatgacccgtgcgccgattctcatcaccggggagaccggcacc
ggcaaggagctgatggcgcgctacattcatcgcttctcagcccaggacgacgcgcccttc
atcgcggtcaactgtgcggcgattcccgagcagatgctcgagtccatcctcttcggccac
gagaaaggcgccttcaccggcgcggtgaacgcccagcccggcaagttcgaactggccaac
ggcggcacgctgctgctcgacgagatcggcgagttgccgctgggcctgcaggccaagctg
ctgcgcgtgctgcaggagcagcgcgtcgaacgcctcggtggacgtcgcgagatcgccctg
gatgtgcgcatcatcgccgccaccaaccgcgacctgcagcaggaggtggcgcaagggcgt
ttccgtgccgacctgatgttccgcctcgatgtgctgccactgcacatcagcccgctgcgc
gagcgcaaggaggatgtactggcgctggcgcgacgtttcatccgccagtacgcgccgcag
gatgcgcgccacgaactgctgaccgaggacgcctgccgcgccctgctggcccacgactgg
ccgggcaacgtgcgcgaactggagaactgtctgcagcgcgcgctgatcctgcgcaacggc
ctgtacatccaggcgcaggacctgggcctgagcctgccgcccagcagcgccccggagccg
gcgccacgcctgcagccacaggcgctcgaaggcggcaaggcggcgctgcgcgcaagcggc
aagtgggccgagtaccagcatgtgatcgacaccatccgccgtttcggcgggcacaagacc
aaggccgccgaaagccttggcatgaccccacgcgcactgcgctatcgcctcaatgccatg
cgtgagcagggcgtgcagattcccgtttag
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