KEGG   Ectopseudomonas khazarica: JLK41_25010
Entry
JLK41_25010       CDS       T07269                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
pkh  Ectopseudomonas khazarica
Pathway
pkh02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pkh00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    JLK41_25010
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:pkh02022]
    JLK41_25010
Two-component system [BR:pkh02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   JLK41_25010
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 FleQ Mg_chelatase AAA_16 DUF3303 MCM AAA_2
Other DBs
NCBI-ProteinID: QTS86520
LinkDB
Position
complement(5319061..5320401)
AA seq 446 aa
MSAQVIVVDDEAAIREAVQQWLELSGFTVRTCASAAEALALVDRDFPGIVVSDVRMPGSD
GLQLLDRLLQVDTDLPVILVTGHGDVPMAVQALRQGAYDFIEKPFTPERLLDSVRRALDK
RRLVCENRQLRQQVADKGRIESQLIGMSRSMENLRRQILELAGTSVNVLIRGETGSGKER
VARCLHDFSPRAGKAFAALNCAAIPETIFESELFGHESGAFTGAQAKRIGRIEHADGGTL
FLDEVESLPLAQQVKLLRVLQEKTLERLGSNKSIQVDLRVISAAKPDLLDEVRAGRFRED
LVYRLNVATLHIPPLRERREDIPLLFEHFAQEAARRHGREAPPLAPSELARLLGHDWPGN
VRELINAAERHALGLSSPPPAERFAGQALAQQMEAFEAQCLHNALLHCQGNITAVMEMLQ
LPRRTLNEKMQRHGLSRGDYLPGGEE
NT seq 1341 nt   +upstreamnt  +downstreamnt
atgagcgctcaggtcatagtggtcgacgacgaagcggcgattcgcgaggcggtccagcag
tggctggagctgtccggcttcacggtgcgcacctgtgccagcgcggccgaggccctggcc
ctggtcgaccgtgactttcccggtatcgtcgtcagcgacgtgcgcatgcccggcagtgac
ggcctgcaactgctcgacaggctgctgcaggtggacaccgacctgccggtgatcctggtc
accggccatggcgatgtgccgatggcggtgcaggcgttgcgccagggtgcctatgacttc
atcgagaaacccttcacccccgaacgcctgctcgacagcgtgcggcgtgccctggacaag
cgccggctggtctgcgagaaccgccagctgcgccagcaggtcgccgacaaggggcgcatc
gagagccagctgatcggcatgtcgcgctcgatggaaaacctgcgccggcagatcctcgag
ctggctggcacctcggtcaacgtgctgatccgtggtgaaaccggcagcggcaaggagcgc
gtggcgcgctgcctgcacgatttcagcccgcgcgccggcaaggccttcgctgcgctgaac
tgcgcggcgatccccgagaccatcttcgagagcgaactgttcggccatgagagcggcgcc
ttcaccggcgcgcaggccaagcgcatcggtcgcatcgagcatgccgacggcggcaccctg
ttcctcgacgaggtggagagcctgccgctggcgcagcaggtcaagctgctgcgcgtgctg
caggaaaagaccctggaacgcctgggctcgaacaagagcatccaggtcgacctgcgggtg
atcagcgcggccaagccggacctgctcgacgaggtcagggcaggccgcttccgcgaggac
ctggtgtaccgcctcaacgtggccaccctgcatatcccgccgctgcgcgaacggcgcgag
gacatcccgctgctgttcgagcatttcgcccaggaggcggcccgtcggcatggccgcgag
gcgccgccgctggcgcccagcgagctggcgcgtctgctcgggcatgactggccgggcaac
gtgcgcgagctgatcaacgccgccgagcgccatgccctgggcctgtccagcccgcccccg
gcggagcgtttcgccggccaggcgctggcgcagcagatggaggccttcgaggcgcaatgc
ctgcacaacgcgctgctgcactgccagggcaacatcacggcggtgatggagatgctgcag
ctgccgcggcgcaccctcaacgagaaaatgcagcgccacggtctgtcgcgcggcgactac
ctgcccggcggcgaggaatga

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