Paramormyrops kingsleyae: 111833003
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Entry
111833003 CDS
T05788
Symbol
dhx38
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
pki
Paramormyrops kingsleyae
Pathway
pki03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pki00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111833003 (dhx38)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pki03041
]
111833003 (dhx38)
Enzymes [BR:
pki01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111833003 (dhx38)
Spliceosome [BR:
pki03041
]
Complex C
Other components
Step II factors
111833003 (dhx38)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
AAA_19
T2SSE
nSTAND3
AAA_16
Flavi_DEAD
Microtub_bd
PhoH
Motif
Other DBs
NCBI-GeneID:
111833003
NCBI-ProteinID:
XP_023646619
Ensembl:
ENSPKIG00000009708
UniProt:
A0A3B3SAU1
LinkDB
All DBs
Position
Unknown
AA seq
1244 aa
AA seq
DB search
MEDDATLHRLEGNQPDEQVGGLIVKKKSAVSEQHVFRPPTPRTSLLGLDLLAAQKRKQRE
EKDRQEAEDDAKKTKKSKVSSYRDWEDGRADSGSDDEDGDEEGMGDKKERKYRVTGSETP
SNPGGVSEEFRKRHQQREKEWREHGVYASSKEEKKRERDRDRRDERERSQRSASRGSSER
GERSERSQREGWSERLSRGIKRDEPESPRHRPRDAPTPSRSSWDEDDSGYASSRRSHWES
PSPAPSHRESDKSERSHRPGRESERRDRSVRSRYPADTPLPTPSYKYNEWANDRKHLGST
PRLSRGKGGKKEDREDGIAFDNEDERQQWEEDQRQADRDWYMMDEGYDEFHNPLNSSSDE
YVKKREQILQKQTQKRISAQKRQINEDNERWETNRMLTSGVVQRLEVDDEFEEDNAAKVH
LLVHNLVPPFLDGRIVFTKQPEPVIPVKDPTSDLAIISRKGSQLVRKHREQKERKKAQHK
HWELAGTKLGDIMGIKKTEEEDSSAGKPVGEDGAVDYRAEQKFADHMKEKSEASSEFAKK
KTLLEQRQYLPIFAVRQQLLNIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTGYGMVGC
TQPRRVAAMSVAKRVSEEMAGNLGEEVGYAIRFEDCTSEKTVIKYMTDGILLRESLRESD
LDHYSAVIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDSDKFATFFGNVPIF
HIPGRTFPVEILFSKTPQEDYVEAAVKQALQIHLSGMHGDILIFMPGQEDIEVTSDQIVE
RLEDLESAPPLAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVID
AGFCKLKVFNPRIGMDALQVYPISQANANQRSGRAGRTGPGQCYRLYTQSAFKNEMLTTT
IPEIQRTNLANVVLLLKSLGVQDLLLFHFMDPPPEDNMLNSMYQLWILGALDNTGALTPT
GRLMVEFPLDPALSKMLIVSCDMGCSLDILIIVSMLSVPAIFYRPKGREEESDQVREKFA
VPESDHLTYLNVYLQWKNNNYSSIWCNEHFIHTKAMRKVREVRAQLKDIMVQQKLDLLSC
GSDWDIIRKCICAAYFHHAAKLKGIGEYVNVRTGMPCHLHPTSSLFGMGYTPDYIIYHEL
VMTTKEYMQCVTAVDGEWLAELGPMFYSIKHAGKTRQENRRRAKEEISIMEEEMSLAQQQ
LRARRDEQERKSNPGSTRSVKICTPGRKEEAPMTPKRTPARFGL
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgacgccactctccaccgtctggagggcaaccaacctgacgagcaggtcggc
gggctgatcgtgaagaagaagagcgccgtgtcggagcagcacgtcttccggccgccgacc
cctcgcacctccctgctgggcctcgatcttctggcggcacagaagcgcaagcagcgtgag
gagaaggaccggcaggaggccgaggacgacgccaagaagacaaagaagtccaaggtttct
tcataccgggattgggaggacggcagagccgactctgggtcagatgatgaagatggtgat
gaagagggcatgggggacaagaaagagaggaaatatcgtgtcactggttctgaaacaccg
tccaaccccggtggagtcagtgaagagtttcggaagagacaccagcagagggagaaagaa
tggcgtgaacatggagtttatgcctcttccaaggaggagaagaagcgagaaagggacaga
gatcggagagatgagcgggagcgcagccagcgtagcgccagcagagggagctctgagagg
ggtgagcgcagtgagcgctcgcagagagagggttggtctgagcggctgagtcgcggaata
aagagggacgagcccgagagccctcgacaccggcccagagatgctcccacgccgtcccgc
tccagctgggacgaggatgacagtggctatgccagctcccggcgttcccattgggagtcc
ccatccccagcgccctcacaccgagaatcggacaagtctgaacggagccaccgccctggt
cgggagagtgaaaggcgggatcggtctgtgaggagccggtacccggctgatacccccctg
cccactccctcctacaaatacaacgagtgggccaatgacaggaagcacctgggctccacc
ccccgcctgtcgcgcgggaaaggaggaaagaaggaggacagagaagatggcatcgcgttt
gacaacgaagatgagagacagcagtgggaggaagatcaaaggcaagccgaccgggactgg
tacatgatggatgagggctatgacgagttccacaacccgctgaactccagctcggacgag
tacgtcaagaagagggagcagatcctgcagaagcagacacagaaacgcatctctgcacag
aagaggcagatcaacgaggataacgagcgctgggagaccaaccgcatgctgaccagtggg
gtggtgcagaggctcgaggtggacgacgagttcgaggaggataacgctgccaaggtgcac
ctgctggtgcacaacctggtgccgcctttcttggatggcaggatcgtcttcaccaagcag
cctgagcccgtcatcccggtgaaggaccccacgtccgacctggccatcatctcccgcaag
ggcagtcagctggtgcgcaagcaccgggagcagaaggagcgcaagaaggcccagcacaag
cactgggagctggcgggcaccaagctgggtgacatcatgggcatcaagaagaccgaggag
gaggacagcagcgcgggcaaaccggtgggcgaggacggcgccgtggactacagagctgaa
cagaagttcgctgaccacatgaaggagaagagtgaagccagcagcgagtttgccaagaag
aagaccctgctggagcagaggcagtacctgcccatcttcgccgtgagacagcagctgctc
aacatcatcagggacaacagcatcgtcatcgttgtcggcgagacgggcagcggcaagacc
acgcagctgacgcagtacctgcacgaggacggctacacgggatacggcatggtgggctgc
acgcagccgcgcagggtcgccgccatgagcgtggccaagagagtgagcgaggagatggcc
ggcaacctgggagaggaggtgggctacgccattcggtttgaggactgcacctccgagaag
acggtgatcaagtacatgacggatggcatcctgctgagggaatcgctgcgcgagtcagat
ctggaccactacagcgcggtcatcatggatgaagcccacgagcgctcgctcaacacggac
gtgctgtttggcctgctccgcgaggtcgtcgcccggcgttcggacctcaagctcattgtc
acgtctgccaccatggactcggataagtttgccaccttctttggaaacgtccctattttc
catattcccggaagaacgttcccagtggagattttattcagcaagacgccccaagaggac
tacgtggaagccgcggtgaagcaggcccttcagatccacctgagcgggatgcacggtgac
atccttatcttcatgcctggccaggaggacattgaggtgacgtcagaccagatcgtggag
cgcttggaagacctggaaagtgctcctccactggctgtcctgcccatttactcacagctg
ccctcagatctgcaagccaagatcttccagaaggctcccgacggcgtgaggaagtgcatc
gtggccacaaacatagcggagacctcgctgactgtggacggcatcatgttcgtcattgac
gcgggattctgcaagctgaaggtgttcaacccccgcatcggcatggatgccctgcaggtt
tatcccatcagccaggctaatgctaaccagcgctccggcagggctggcaggacggggccc
ggccagtgctacaggctgtacacccagagtgctttcaagaacgagatgctcaccaccacc
atcccggagatccaacgcacgaacctggccaacgtagtactgctgcttaagtcactgggt
gtccaggacctgctgctcttccacttcatggaccccccaccggaggacaacatgctcaac
tccatgtaccagctatggatcctgggggctttggacaacactggtgcgctcacccccacc
ggaagactcatggtggaattccccctggacccagcgctgtccaagatgcttatcgtctcg
tgtgacatgggctgcagcttggatatcctcatcatcgtgtccatgctcagcgtcccggcc
atcttctaccggcccaagggtcgcgaggaggagagcgaccaggtgcgggagaagtttgcc
gtccccgagagcgaccacctgacctacctcaatgtctacctgcagtggaagaacaacaat
tattccagcatttggtgtaacgagcacttcattcacaccaaggccatgcgtaaggtgcga
gaggtgcgggcccagctcaaagacatcatggtccagcagaaactggacctgctgtcatgt
ggctccgactgggacatcatcaggaagtgcatctgcgctgcctacttccaccatgccgcc
aagctgaagggaatcggggagtacgtcaacgtgaggacgggcatgccctgtcacctccac
ccgaccagctcgctcttcggcatggggtacacccccgattacatcatctatcacgagctg
gttatgaccactaaggagtacatgcagtgtgtgacggctgtggacggcgagtggcttgct
gagctgggccccatgttctacagcatcaaacacgccgggaagactagacaggagaaccgg
aggcgtgccaaggaagagatctccattatggaggaggagatgtccctggcacagcagcag
ctgcgggcacggcgggatgagcaggagaggaagagcaacccgggtagtaccaggtctgtg
aagatctgcacccctggcagaaaggaggaggcccctatgaccccaaaacgcaccccagct
cgattcggactgtga
DBGET
integrated database retrieval system
