Paramormyrops kingsleyae: 111833446
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Entry
111833446 CDS
T05788
Name
(RefSeq) CCR4-NOT transcription complex subunit 6-like
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
pki
Paramormyrops kingsleyae
Pathway
pki03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111833446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pki03019
]
111833446
Enzymes [BR:
pki01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
111833446
Messenger RNA biogenesis [BR:
pki03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111833446
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
111833446
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_14
LRR_4
LRR_1
LRR_LRWD1
type_II_gspD_N0
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
111833446
NCBI-ProteinID:
XP_023647487
Ensembl:
ENSPKIG00000002892
UniProt:
A0A3B3RE66
LinkDB
All DBs
Position
Unknown
AA seq
549 aa
AA seq
DB search
MPREKYDPPDPRRLYTIMSAEEAANGKKSHWSELEISGRVRSLSSSLWTLTHLTALHLND
NNLSRIPPEIAKLQSLVYLNLSSNKLRSLPAELGNMVSLRELLLNNNLLRVLPYELGRLF
QLQSLGLKGNPLSQDILNLYQEPDGTRKLLNYMLDNLAVHPEQLPQRPWITLKERDQMIP
TATFTVMCYNVLCDKYATKQLYGYCPSWALNWEYRKKGIMEEITNCDADIISLQEVETEQ
YYALFLETLKERGYDGYFCPKSRAKLVSEPERKHVDGCAIFFKTEKFTLVQKHTVEFNQV
AMANSEGSEVMLNRVMTKDNIGVAVLLEVNKDMFSGGTKPIQEKQMLLVANAHMHWDPEF
SDVKLIQTMMFISELKSIAEKASRSEASSSTALDSGSIPIVLCADLNSLPDSGVVEYLSN
GGVAENHKDFKELRYSECLTNFSCNGKNGNSEGSITHSFQLKSAYENDLMPYTNYTYDFK
GVIDYIFYSKTHMSVLGILGPLDIQWLEENCITGCPHPHIPSDHFSLLTQLELHPPSLSL
NGLHLPIHR
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgcccagggaaaaatatgatcccccagatcctcgccgattatatacaatcatgtcagct
gaggaggcagcaaatggaaagaagtcacattggtcagagctggagatttcaggacgggtt
cgaagcctgagtagctcgctatggacattgacacacttgacggcgctgcatctcaacgac
aacaacctaagtcgcattcctccagagatagccaaactccagagcctggtttacctgaat
ctttcctccaataagctgcgcagcctgccagcagaacttggaaacatggtgtcactcagg
gaattgcttttaaataacaatcttttacgagttctgccttatgaacttgggcggctgttt
cagttgcaaagcttaggcttgaaaggaaatcctttgtcacaagatatccttaatctttac
caggaacctgatggaaccagaaagcttcttaattatatgcttgacaatcttgcagtgcac
cctgaacagcttcctcaaagaccttggattacactaaaagaacgagaccaaatgattcca
acagccacatttacggtcatgtgttacaacgtgctgtgtgacaagtatgccacaaaacag
ctgtacggctactgtccatcttgggcgctgaactgggagtacaggaaaaagggaatcatg
gaggagatcacaaactgcgatgcggatatcatcagtcttcaggaagttgaaactgagcag
tactatgctctctttctggaaaccctgaaggagcgtggctatgatggctacttctgccca
aagtctcgtgccaaattggtgtccgaaccagaaaggaagcatgtggatggctgtgcaata
tttttcaagacagagaagttcacacttgtgcaaaagcacactgttgaattcaaccaggtc
gcaatggcgaactcagagggttcagaagtcatgctcaatcgagtaatgacgaaagacaac
attggagtagctgtattgttagaggtcaacaaggacatgttttctggagggacaaaaccc
atacaagagaagcagatgctcctagtagccaatgcacacatgcactgggaccctgagttt
tctgacgtgaagctgatccagaccatgatgttcatttcggagctgaaaagcatcgcggag
aaagcctctcggtcagaggcgtccagctccaccgctctcgattccggctccatacccatt
gtcctgtgtgcggatctcaattcgctaccagattcaggagtggtggagtatttgagtaat
ggcggagtggctgaaaatcacaaggacttcaaagagctccgctatagtgaatgtctaacg
aacttcagctgcaacggaaagaatggcaactctgagggcagcatcacgcacagcttccag
ctgaagagcgcgtatgagaatgacctgatgccttacactaattacacttatgattttaag
ggcgtgatcgactacattttctattccaagactcacatgagtgtcctgggcatcctgggg
cccttggacatccagtggctggaggagaactgcatcacgggttgtccgcacccccacatc
ccctctgaccacttctccctgctcacgcagctggagctgcatccgccctccctgtcgctc
aatggcctccacctgcccatccacaggtag
DBGET
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