Paramormyrops kingsleyae: 111836502
Help
Entry
111836502 CDS
T05788
Name
(RefSeq) collagen alpha-5(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
pki
Paramormyrops kingsleyae
Pathway
pki04382
Cornified envelope formation
pki04510
Focal adhesion
pki04512
ECM-receptor interaction
pki04518
Integrin signaling
pki04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111836502
04518 Integrin signaling
111836502
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111836502
09142 Cell motility
04820 Cytoskeleton in muscle cells
111836502
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
111836502
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pki04147
]
111836502
00536 Glycosaminoglycan binding proteins [BR:
pki00536
]
111836502
Exosome [BR:
pki04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
111836502
Glycosaminoglycan binding proteins [BR:
pki00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111836502
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
111836502
NCBI-ProteinID:
XP_023653605
LinkDB
All DBs
Position
Unknown
AA seq
1676 aa
AA seq
DB search
MYKMNNNNNVKNLEEPKRAVALLLIILCFAVGDLESAACHGCASGAVCDCSTLKGVKGEM
GFPGLEGQPGVAGFPGPEGHMGPRGEKGSDGSTGPAGPKGIRGPPGLPGFPGTPGIPGLP
GQDGPLGPKGPPGCNGTKGERGFPGNPGHPGLQGSLGSPGIPGFKGDSAEIFSANALGEM
GEPGFLGLPGIQGLPGLAGPIGPPGPKGFAGLPGPPGPPGPKGNMGLNFQGSKGDKGEQG
TPGQPGPPGTIREQKRPGRSEIQKGDKGSQGSPGPAGQPGLPGPPGPPGGPKGMKGEPGE
AGKRGKPGKDGNDGQAGFPGPKGEPGLPGFPGREGSWGEKGDRGFPGLPGPVLYDMEQNA
EGPKGEPGYPGSQGPKGEPGLQGVPGPPGQPGAPGLGSQGPLGSPGLPGEVGQKGEDGPS
GLPRPGSPGLQGPPGGTGPPGLPGPPGIANCIGEIQQKGSIGFPGLKGEKGEKGNTCVSC
ISNNRHVVGPQGPVGPPGTPGIPGHPGVKGDQGFPGSPGLAGLPGFPGSQGAPGLPGQKG
QPGDTVPLDGLKGEKGDTGFTGPTGLPGLNGQPGQDGFPGQPGLHGFPGSTLGKGDHGLP
GEPGNPGPPGDAGPPGAPGFAPPGPPGEKGIQGMSGRTGSPGVPGQKGEPGETQKVKGQP
GPSGPPGEEGHVGPPGSSGGPGRPGVPGLPGAKGEQGPLGIGSPGAAGVKGNPGMTGIPG
SPGIPGRPGSDGLPGHPGSPGPKGDSGFAVTGLPGPAGFPGGQGAPGPNGDSGFPGRDGQ
SGLPGLVGAPGPKGDAGFPGPQGPQGLPGLPALGLPGPHGPPGPQGVGGTSGFPGVQGDK
GDPGPPGLDVAGLPGDKGRPGFPGAPGPVGLPGSPGQPGQDGLPGFQGTKGEMGVVGSTG
FQGPSGSFGVPGFTGAKGDSGFPGKLGAPGIPGLKGERGDPGLLGPQGIISTEKGPKGEP
GAPGLPGVPGQKGVTGVSGEKGLLGTDGRAGQPGSPGPKGASGVLGEPGLPGPAGLKGAM
GDMGFSGPAGVKGAPGNPGSPGLPGQPGASGFKGEKGDPGPPGAELRGSSGAKGNPGQPG
FPGIPGIKGQPGAPGLPGLPGSPGEKGNPGFHGTPGMPGISGPKGFDGAPGPPGTDGPVG
PQGRPGSTGLPGPSGEKGPGGRDGIPGPTGIKGEHGPRGFGRPGTPGLPGLRGPKGDPGL
PGVPGSSSFPGQKGEQGAPGVPGFPGNVGPSGPPGVSGTGPKGNPGHPGPPGRTGSPGPE
GPQGLPGLGTLKGDKGMPGFHGGPGPMGLKGAIGLPGTPGHPGEPGAAGLKGDAGFPGQH
GFPGGLGQPGLPGIPGLPGDKGVTGAPGPPGDPPTITTSYFLRTERGPLGPPGTPGSQGP
AGPPGRDGVPGKPGQSGDSGPMGNHGFSGPLGRKGDMGPPGPPGHQGLPGHPGPDGLQGP
PGLPGSSSSAHGFLMTRHSQSTEDPSCPDGTIFLYHGYSLLYVQGNERAHGQDLGAAGSC
LRRFSPMPFMFCNINNVCNLASRNDYSYWLSTPHPMPANMAPVTGENIKPFVSRCAVCEA
PTMVVALHSQSIQLPPCPANWETLWIGYSFMMHTSSGAAGSGQALVSPGSCLEDFRASPF
IECHGRGTCNYYSNSYSFWLATVDDLEMFSKPQGETLKVGNLQTRVSRCVVCMKRT
NT seq
5031 nt
NT seq
+upstream
nt +downstream
nt
atgtataaaatgaacaacaacaacaacgtaaagaatctcgaagagccgaaacgtgcagtg
gctttactgctcataatactctgctttgcagttggagacctggagtcggcggcctgccat
ggctgtgcatcaggagctgtttgtgactgtagcaccttgaaaggagtcaagggtgaaatg
ggctttccaggactagagggtcagccaggggtggcggggttcccagggccagagggacac
atgggaccaagaggagaaaaaggcagcgatgggtccactgggccagctggtccgaagggg
attaggggtccgccaggattgcctggatttccaggaacaccaggaatcccgggtctgcca
ggacaggatggtccactgggccccaagggacctccagggtgcaatggaacgaagggggag
cgtggatttcccggaaaccctggtcatccaggcctgcaggggtccttgggttcacctggt
atacctggattcaagggcgactctgcagagatcttcagtgccaacgccttgggggagatg
ggggagccaggatttctgggccttcctggaatccaaggacttccaggattggctggccct
attggcccccccggaccaaaaggctttgcggggcttccgggaccccctggtcctccaggg
ccaaagggtaatatgggcttaaacttccaaggatctaaaggggataagggagaacagggc
accccagggcagccagggcctccaggaaccatcagagaacagaagcggccaggcaggtcc
gagatccagaagggagacaaggggagtcagggatcacctggcccagctggacagcctggt
ctgcctggacctcctggtccacctggaggtccgaaaggcatgaagggggagcctggagaa
gcagggaaaagggggaagccaggcaaggatggcaacgacggacaggcgggatttccgggc
cccaaaggagagcctgggcttcccggatttccgggcagggaagggagttggggtgaaaaa
ggtgaccgcggcttcccaggtcttccaggtccagtgctgtatgacatggagcaaaatgcc
gaaggaccgaaaggagagcctggttaccctgggtctcagggacctaaaggagagcctggt
ctgcagggtgtgcctgggcctcctggacagcctggggcaccaggtcttggatcccaaggt
ccactcggttcacctggtcttcctggagaagtgggacagaaaggagaagacggaccgtca
ggattacctcggcctggatccccagggttacaggggcctcctgggggcacaggaccccca
ggtctgccgggacccccaggaatagcaaactgcattggcgagatacagcagaaaggcagc
atagggtttccgggactaaaaggagagaagggtgaaaagggcaacacctgtgtcagctgt
atctctaacaatcggcatgttgtgggacctcaaggtccagttggacctccagggacacca
ggtattccaggacaccctggggtaaaaggtgatcaaggatttccaggaagccccggattg
gctgggctaccaggttttcctgggtcccagggagctccaggtctccctgggcagaagggg
cagccaggagacactgtccctctggatggattgaaaggagagaaaggggacactggcttc
acgggacccactggcttacctggcctgaatgggcagccgggtcaagatgggttccctgga
cagcctgggctccatggtttccctgggtctactttaggtaaaggggaccatggcctacca
ggggaacctggaaatccaggcccccctggagatgccggacctcccggtgcacctggattt
gcccccccggggccacctggagagaaaggtatccagggtatgtcgggaagaacaggctca
ccaggtgttccaggtcagaaaggggagcctggagagacgcagaaggtgaaaggtcaacct
ggtccttcagggccccctggggaggagggccacgtgggacccccaggtagttcaggtggg
cccgggagaccaggagttccagggctacctggcgcaaagggggaacaaggtcctcttggc
attggttctccaggtgctgcaggggtcaaagggaaccctggaatgacaggcattcctggc
agccccggcatccctggacggcctgggtccgatggcctccccgggcacccaggctcccca
gggcctaagggtgattctgggtttgctgtaactggcctcccaggacctgcaggatttcct
ggtggccaaggagcccctggaccaaatggtgactccggcttcccaggaagagatggacag
tcaggcctgccaggcttggttggagctcctgggccaaaaggggatgctggctttcctggg
ccccagggacctcaagggcttccaggtcttcctgctttagggcttccggggccccatgga
cctcctggccctcagggggttgggggcacgtcagggtttcctggtgtgcaaggtgacaaa
ggtgacccgggcccccctggactggatgttgccggactgcctggggacaaagggagacca
ggcttccctggagccccggggccagtgggccttcctggttcccctggccagccaggtcaa
gatggacttcctggattccaaggcaccaaaggagagatgggagtggtggggtccacaggt
tttcaaggtccctcagggagctttggtgtgccaggattcactggagcaaaaggcgatagt
ggattccctgggaagcttggagctcctggtattcctgggctcaagggagaacggggtgac
cctggcctactgggccctcaaggcatcatcagtactgaaaagggcccgaagggagagcct
ggggctccaggtttgccaggtgtcccggggcagaaaggtgtcacaggtgtttcaggagag
aaaggccttctgggaactgatggaagagcaggacagccgggttctccaggacccaaagga
gcttctggagtcctaggtgaacctgggctccccggaccagctgggctgaagggtgcaatg
ggtgacatgggattctcgggtccagcaggggtgaaaggtgcaccagggaacccaggaagc
ccagggctacctggccagccaggggcttctgggttcaagggagagaagggggacccagga
ccccctggtgctgaactccgaggaagttcaggagccaagggtaacccaggacagcctgga
tttcctggaatccctggaataaaaggccaaccgggagcacccggattaccgggcctgcct
ggcagcccgggagagaagggaaaccccgggttccatgggactccaggtatgccgggcatc
tctggcccaaagggcttcgatggagctccaggtcctccaggtactgatggtccagtagga
ccacaaggacgcccaggtagtactggactgcctggcccttctggagagaagggcccagga
gggcgtgacggcattcctggacccactgggataaagggagagcacggtccacgcggcttt
ggtcgcccaggaactcctggattaccaggcttgcgaggtccaaaaggggatcctggtctt
cctggtgtacctggtagctccagctttcctggacagaagggtgagcaaggggccccaggt
gtgcccggattccccggcaatgtcggcccctcgggtccccctggtgtgtcaggaacaggg
cccaaaggtaatccggggcaccctggtcccccaggaagaactggttcccctggtcctgaa
gggccacaaggcctcccaggtctgggaacattgaagggggacaaaggcatgcctggattc
catggaggacctggcccgatgggtctgaaaggcgccattgggcttcctggcactccggga
catcctggtgaaccaggagccgcagggttgaagggagacgctggattccccggacagcat
ggattcccaggtggactgggtcagccaggacttcctggaatacctggtctgcctggagac
aaaggagtcacgggtgcaccaggacccccaggtgaccccccaacaattactacttcatat
tttttgagaacggaaagaggccccctgggccccccaggtacgcccggctctcaggggccc
gctggccctccaggcagagacggcgttccaggtaaaccaggacaatctggagattcaggt
ccaatgggtaaccatgggttttccgggcccttgggtcggaaaggagacatgggcccaccc
gggcctccaggtcaccaaggtctccctggccatcctggaccagatgggctgcaaggtccc
cctggcctgccaggctcatcctcatcggctcacggcttcctcatgacgcgtcacagccag
tccacggaggacccctcttgccccgatggcaccatattcttataccatggctactccctg
ctgtacgtccagggcaacgagcgggcccacggtcaggacttgggagcggcgggcagctgc
ctgcgcagattcagccccatgcccttcatgttctgcaacataaataacgtctgcaacctg
gcgtcacgcaatgattactcctattggctgtccacgccgcaccctatgcctgccaatatg
gctcctgtgaccggggagaacatcaagccattcgtcagcaggtgtgcggtctgcgaagcc
cccaccatggtggtcgcattgcacagccagtccatccagttgcccccctgccctgccaac
tgggagactctctggattggctactccttcatgatgcacaccagctctggtgcggcaggc
tccggtcaggccctagtgtcccccggctcctgcctggaggacttccgcgcctcccccttc
atcgagtgccatggccggggcacctgcaattactacagcaactcctacagcttctggctg
gccactgtggacgacctggaaatgttcagtaagccccaaggagagaccctcaaagtgggg
aacctgcagacgcgggtcagccgctgtgtggtttgcatgaagaggacgtaa
DBGET
integrated database retrieval system