Paramormyrops kingsleyae: 111836662
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Entry
111836662 CDS
T05788
Name
(RefSeq) collagen alpha-4(IV) chain-like isoform X1
KO
K06237
collagen type IV alpha
Organism
pki
Paramormyrops kingsleyae
Pathway
pki04382
Cornified envelope formation
pki04510
Focal adhesion
pki04512
ECM-receptor interaction
pki04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111836662
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111836662
09142 Cell motility
04820 Cytoskeleton in muscle cells
111836662
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
111836662
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pki04147
]
111836662
00536 Glycosaminoglycan binding proteins [BR:
pki00536
]
111836662
Exosome [BR:
pki04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
111836662
Glycosaminoglycan binding proteins [BR:
pki00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111836662
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
111836662
NCBI-ProteinID:
XP_023653917
LinkDB
All DBs
Position
Unknown
AA seq
1650 aa
AA seq
DB search
MKTSIICITCSSLFFWWNMPLLMVRAGGNHEPCEGRDCSSCPCFPVKGTRGATGYLGKAG
PQGPSGPPGPSGPQGEKGQGGDVGLPGHAGPTGDVGLTGSPGFMGLSGVPGHPGDGGRLG
VPGRDGCNGTKGDPGPPGVPGWHGILGMQGTAGTKGARGDPVYTHLPGVPGDSGLPGLSG
PPGALGIVGVPGLQGPAGPIGPWGLPGLPGPRGPPGDWGRSLPGPKGDEGGQGPDGDPGP
FEFVTLPDGIYPQGPKGDQGAKGQRGPPGVNGRDSLSGEKGAKGVVGFQGPRGLPGRRGL
PGIPGIKGYNGYPGLPGLTGNRGPKGFSGDPGMKGDSVFELYNVTGSPGDPGLHGPPGEP
GDTGSIGMPGHRGRPGQSYPGLAGNPGSPGPEGEKGVKGNPGRTRPTEGEPGIKGLPGPS
GLRGPAGHPGPGCHPGDPGTPGPPGDPGRRGERGRKGNKGYPGECQCDGHWLQVPGLVGP
MGPAGPLGGNGQHGERGDRGDPGNIGLQGPPGLPGLPGPSGVKGQKGNPYTAAIKGVKGD
LGFPGSLGPHGVPGPDGIPGAQGVPGDHGPPGDTYPGFPGDSGNMGVEGPKGPPGPMGPP
GNGIVGPIGPPGPPGDQGRPGWPGPPGLKGPSGTDLDPGDVLPCIPSQPGTPGAKGMMGY
PGSPGDPGRPGINGMPGYDGPKGQKGDMGEQTQYGPKGIPGPLGDPGERGFDGPSLDGIP
GARGPEGLPGLKGVIGMAVPGSPGIIGLRGPPGLPGPKGLRGLLGLPGAEGPGGSPGAEG
HRGVQGDQGEPGPPGPKGRALCVGPPGQPGPPGYNGFQGPPGSQGEKGEVGSVGLAVGGS
KGPPGPTGPPGLPGDPGAPGSMGHPGDSGRPGVPGQKGVQGLPGEKGSHGYPGLPGPSGP
PGRKGDNGANGCPGPPGEHGLKGLKGSKGHTGNPGSVTKGNKGDQGPCGPNGFSGPRGEK
GTAGYKGRPGDPGPPGPPGMVKGPLGLPGSPGSIGPKGCPGSRGSIGIMGFPGIPGDQGD
PGFHGPPGNPGIPGLVGMKGDIGESIGIPGPSGEKGVPGDDRHGCDHPAVEPGDTGDPGW
PGAPGLTGPPGHPGSAGPPGFPGSFGQEGPPGNHGPQGPVGPPGRPGPKGYPGQPGDRGA
PGTMGLPGLDGLKGQKGEKGAGGSNMPGPPEPPGSPGVKGPIGRQGPPGAAYQGSNGQRG
PNGQPGLPGQPGFSGAKGKDCRIAIPGPPGDLGLPGANGWPGPPGEDGLPGPTYSIPGDP
GYPGQSGCAGLKGNAGPPGLPGHPGDPGLPGLKGDKGPQGEMGDRGPSGRTGQPALPGLK
GDKGIAGERGPPGRPPFPHRGPPGDPGPMGPPGLPGSPGLPGSPGTQGRKGEPGPLGLPG
PDGPPGPPGVSGDVGVPGDEGTMGLQGPPGSQGEPGLPGPCRNYYSSYPLVIHSQSNAVP
VCPLGMAPLWSGYSLLHFERQEKAHLQDLGEVGSCLRVFSTMPFVYCDAAACSYASHNDK
SYWLASATPMAVMPVSGPEIASSISRCVVCEGQSPAVAVHSQDMSTPLCHKGWRSLWMGY
TFLMHTGAGDTGGGPSLASSGSCLKDFLSQPVIECQGPRGTCHYFSKLHSFWLARVDMAE
QFISAPSSAILKEEWQQRQQASRCNVCIKE
NT seq
4953 nt
NT seq
+upstream
nt +downstream
nt
atgaagacctcaatcatctgcatcacctgctcttccctctttttctggtggaacatgcca
cttctgatggtccgtgcaggaggaaatcatgaaccctgtgagggccgagactgttccagc
tgcccgtgtttcccagttaaaggaactcgaggagctactgggtacttggggaaggcaggc
ccccagggtcccagtgggcctccaggtcccagtgggcctcaaggagaaaaaggacaaggg
ggcgacgtagggctgccagggcatgcaggacccaccggagatgtgggtctgactggtagt
cctggattcatggggctcagtggtgttcctggtcacccaggtgatggaggccgtctgggg
gtccctgggcgagacggctgtaacgggacgaagggtgaccctggtcctcctggggttcct
gggtggcatggaattctagggatgcagggtactgcaggaacgaagggagccagaggagat
ccggtgtacacccatcttcctggagttccaggagattcaggattaccaggcttatccggc
ccacctggggcgcttgggatagttggtgttccaggcttacagggaccagctggacctata
ggaccatggggtctgccaggtcttcctggcccaaggggacctcctggtgattggggaaga
tctcttcctggaccgaagggtgacgagggagggcagggacctgatggtgaccctggaccg
tttgagtttgtgaccctgccagatggaatctacccacaaggacccaagggggatcaaggt
gccaaaggccaacgtggaccccctggtgtcaatggaagagactccctgtcaggagaaaag
ggagcaaaaggagtcgttggctttcaaggtcctcggggtttacctggtcgtcgtggtttg
cctggtattcctggaataaagggttacaatggataccctgggcttcctggtttaacaggc
aacagggggccaaagggcttcagtggagaccccggcatgaagggagactccgtatttgaa
ctctacaacgtcacaggttctcctggtgacccgggcctgcatggcccacctggagaacca
ggggacacaggatcaatcggcatgccgggacatcgagggcggcccggtcagtcctaccca
ggtttagcaggtaacccgggaagccctgggccagagggggaaaaaggcgtgaaggggaac
ccaggaaggacccgtccaaccgaaggagagccaggaattaaaggtctcccaggacccagt
gggctcaggggcccagctggacacccagggccaggctgccaccctggggaccctggcaca
cccggaccaccaggagatcctgggagacgtggcgaacgaggaaggaagggaaacaaaggc
taccctggggagtgccaatgtgatggccattggcttcaggtgccgggtcttgtaggccct
atgggccctgctggacctctggggggcaacggtcaacatggagaaaggggagacaggggt
gacccaggaaatataggactgcaagggccgcccgggcttccaggactgcctggcccctca
ggggtaaaaggccagaaaggcaacccctacacagcagcaattaaaggtgtaaagggtgac
ctgggctttcccggctccttaggacctcacggcgttcctgggcctgatgggatacctggt
gcccaaggtgtccctggtgatcacgggccaccgggggacacttatccaggatttccgggt
gattcagggaatatgggtgtcgaaggtcctaagggtccaccaggtccgatgggtccccct
ggtaatggaatcgtggggccgatagggccaccggggcccccaggtgaccagggtcgccca
ggttggccagggccacctggtcttaaaggtccttcaggtactgaccttgatccaggtgat
gtgctgccatgtatacccagccagccaggcacgcctggggccaagggtatgatgggatac
ccagggagcccaggagatccagggcgtcctggtattaatggaatgccaggttatgatggg
cctaagggacagaaaggagatatgggggagcaaactcaatatggacccaaagggattcca
ggacccctgggtgaccctggagaaaggggctttgatggacccagtcttgatggcatccct
ggcgcacgaggtccagaggggctgcctggactgaagggggtgattgggatggcagtgccc
ggaagtccaggcattataggactcagaggaccgcctggtcttccaggccctaaaggatta
cgaggactgttgggtctacctggagctgaagggccaggagggtctcctggagcagaggga
cacagaggtgtacaaggtgaccaaggagagccaggccctccagggcccaaaggcagggca
ctgtgtgttggacccccaggtcagccaggaccaccaggctacaatggtttccagggccct
ccaggctctcagggtgagaaaggtgaggtgggaagtgttggactggcagttggtggctca
aagggccctcctggaccaactggcccacctgggctccctggagaccctggagcgccagga
tccatgggccatcctggagacagcggtaggcctggtgtacctgggcagaaaggcgtccag
gggctccctggcgaaaaaggttcacatggctacccagggctgcctggcccatctggtcct
cctggaaggaagggagataatggagccaatggctgccctggaccccctggtgaacatgga
cttaaaggactaaaagggagcaagggccatacagggaatcctggatctgtgaccaaaggg
aataagggagaccagggtccctgtggcccaaacggattttcaggacccagaggagagaaa
ggtacggctgggtacaaaggacgacctggtgatcccggaccaccaggacctcctgggatg
gtgaagggacccctggggttaccagggtcaccgggatcaattggcccaaaaggctgtcct
ggttcccgtggctcaatcggcatcatgggattcccaggaatccctggtgatcagggtgat
ccagggttccatggacctcctggcaaccctggaattccaggacttgtaggtatgaaaggc
gatattggagaatctataggtattccagggccatctggagaaaaaggtgtcccgggagat
gacaggcatggatgtgatcatcctgcagttgaaccaggcgatacaggtgacccaggttgg
ccaggtgctccggggttaactggacccccgggtcatcctggatctgcaggacctcctggc
tttccgggttcttttggtcaagaaggtccacctggtaatcatgggcctcaaggtccagta
gggccccctggacgtcctggacctaagggatatcctggacagccgggtgatagaggtgca
ccaggaaccatgggtctgcctgggctggatggtttgaaggggcagaagggtgaaaagggc
gcaggaggttcaaatatgccaggtcctccagagcccccaggatccccaggtgtcaaggga
cctataggcaggcaggggcctccaggggctgcgtatcaaggctcaaacggccagcggggc
ccaaatggacagccaggtcttccagggcagcctgggttctctggtgcaaaaggaaaggac
tgcaggattgccatccctgggccgcccggagatctgggcttacctggtgcaaatgggtgg
ccaggaccaccgggtgaagatggacttccaggtccaacatattcaatcccaggtgaccca
gggtaccctgggcaatcagggtgtgcagggctgaaaggaaatgcaggcccccccggtctt
cctggacaccctggggacccgggtttgccaggtctcaagggtgataaagggccgcagggg
gaaatgggtgatcgggggccatctggccgcacaggacaaccggcgctcccagggctcaag
ggagacaaaggaatagctggagaaagaggcccccctggacgccctccatttccacacaga
gggcccccaggtgacccagggcctatgggtcctccaggtctcccaggttctcctggctta
ccaggaagccctggaacacagggaaggaagggtgaaccagggccattagggctccccggg
ccagacgggccccctgggcccccaggagtttcaggtgacgtgggtgttccgggggatgaa
ggcactatgggtctacagggtcctcctggttcccagggagaaccagggctaccggggcct
tgtaggaattattactctagttatccactggtgatacacagccaatcaaatgcagttcca
gtctgtccattaggaatggcccctctctggagtggctacagtctgctccactttgagcgt
caggagaaagcgcatttacaggacctaggtgaagttgggtcgtgtttaagagtattcagc
accatgccgtttgtttactgcgacgctgctgcgtgcagctatgccagccacaatgacaaa
tcctactggctggcatccgccacgcccatggccgtgatgccggtgtcgggccccgagatt
gcgagctccataagccgctgtgtggtgtgtgagggtcagtctcctgccgtcgccgttcac
agccaggacatgtccacaccactctgccacaagggctggaggagtctgtggatgggatac
acctttcttatgcacacgggggctggtgacacggggggtggtccatccttggcctcctca
ggtagctgcctcaaggacttcctcagccaaccggtcattgaatgccagggtccacgggga
acctgccactatttttctaaacttcacagcttctggttagctcgtgtggatatggctgag
cagttcatctccgccccctcatcagctatactcaaggaggagtggcaacagcgtcaacaa
gccagcaggtgcaatgtctgcattaaggagtga
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