Paramormyrops kingsleyae: 111837663
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Entry
111837663 CDS
T05788
Symbol
trub1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pki
Paramormyrops kingsleyae
Brite
KEGG Orthology (KO) [BR:
pki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pki03016
]
111837663 (trub1)
Enzymes [BR:
pki01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
111837663 (trub1)
Transfer RNA biogenesis [BR:
pki03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
111837663 (trub1)
Prokaryotic type
111837663 (trub1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
GAIN_A
Pus10_C
Motif
Other DBs
NCBI-GeneID:
111837663
NCBI-ProteinID:
XP_023655669
LinkDB
All DBs
Position
Unknown
AA seq
321 aa
AA seq
DB search
MAAVVTGTVSQRAPLSKLQSLNGLFAVYKKQGPTSADVLNRLKEKLLQEVGEKHQNPRKR
KKALLKMGHGGTLDSAASGVLVVGIGSGTKMLTTMLTGSKKYSAVGELGKATDTLDATGT
VTQENSFEHITREDMEEKLKKFTGEIMQVPPLYSALKRNGQRLSVLLKQGQKVEAKPARP
VTVHRLSLKDFSPPLFTLDIECGGGFYVRSLVDDLGKELSSSAHVRELTRTKQGQFTLEH
ALHEEHWTVEHISHSLKEPPGLPAASDGSGEMEMDPYPAVRSESDHEEPASSSRHPEREP
HPDTGAQSEAGGLPSREKNLA
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggtggtgacgggcacagtgtctcaaagagctccgctgtccaagttgcagtct
ttaaatggactttttgcagtttataaaaaacaaggacccacatcggccgacgtgttaaat
aggctgaaggagaaacttctacaagaggtgggtgagaagcatcagaacccccgcaagagg
aagaaggcactgcttaaaatggggcacggtgggacgctggacagcgctgcctctggcgtt
cttgtggttgggattggcagcgggaccaaaatgttaaccaccatgctgacaggttccaag
aagtacagtgctgtaggagagcttgggaaggccacagacacgctggacgccacaggaact
gtcacccaggagaacagctttgagcacatcaccagagaggacatggaagagaagctgaag
aagttcactggagagatcatgcaggtcccaccgctatattcagccctaaagaggaacgga
cagcgactctctgtcctgctaaagcagggtcagaaggtggaagcaaagccggctcggcca
gtgaccgtgcaccgtctgagcctgaaggacttcagtccccccctctttaccctggacatt
gaatgtggtggtggtttctatgtcaggagtttggtggatgatcttggtaaagagctgtcc
tcaagtgcccatgtcagggagctgacacgcaccaagcaggggcagttcaccctggaacac
gccctgcatgaggagcattggactgtggagcacatctctcactcgctgaaggaacctcct
ggcctcccagctgccagtgatggctcaggggaaatggagatggatccctaccctgctgtc
agatcagagagtgaccatgaggaaccagccagtagctccagacatcctgagagagaaccc
catccagatactggagcacagagtgaggctggaggcctgccaagcagggagaagaattta
gcttga
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