Paramormyrops kingsleyae: 111837727
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Entry
111837727 CDS
T05788
Symbol
polr1a
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
pki
Paramormyrops kingsleyae
Pathway
pki03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pki00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
111837727 (polr1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pki03021
]
111837727 (polr1a)
Enzymes [BR:
pki01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
111837727 (polr1a)
Transcription machinery [BR:
pki03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
111837727 (polr1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
HMG_box_2
HMG_box
Motif
Other DBs
NCBI-GeneID:
111837727
NCBI-ProteinID:
XP_023655802
Ensembl:
ENSPKIG00000005468
LinkDB
All DBs
Position
Unknown
AA seq
1700 aa
AA seq
DB search
MLVDKEIPWRRLEGVSFGMYSAEEIRKLSVKAITNPRFLDNVGNPASNGLYDLSLGPSDT
KEVCTTCMQGFNNCPGHLGHIELPLPVYNPLLFDKLYLLIRGSCMRCQMLSCPRSAIHLL
LQQLRVLEVGALEAVYELEAELNRYLEGNVKATGVEIQEVLEDYTAGFLRKWKDRDSAFP
VKRVCQCKNQLVQTFWRENMIPRKCPNCKAGRPQVRKEHNSKLIVTLPASKLKETQEQGD
VIDGSQLGKRGYLTPSTAKEHVAGLWKNEGFFLKHLFSGLDVCEGSNADISQEIFFLQLM
VVPPSRYRPVNCLGDQMFTNGQTVNMQAVMKDSVVIQKLLALMANEKARQLESEEVEVNQ
TDQSFLAGVPGVTLTDKLYNMWIRLQSHVNIVFDSDMDKLMTEKFPGIRQILEKKEGLFR
KHMMGKRVDYAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNVKELRQAVMNGPN
VHPGASTVINEDGTRTMLSATHRTQREAIAKQLLTPAPGPHRMPMKIVNRHIKNGDVLLL
NRQPTLHRPSIQAHCARILPAEKVLRLHYANCKAYNADFDGDEMNAHFPQSELGRAEAYT
LVSTTQQYLVPKDGKPLAGLIQDHMVSGTSMTIRGCFFTREQYMELVYRGLTDRRGRVKL
QPPALLKPYPLWTGKQVVSTLLLNVIPENEIPLNLTGKSKIPSKAWVKDSLRAIPRYNPE
DMCESQVVIRQGELLVGVLDKAHYGSSAYGLVHCCHELYGGHTSGNLLSCLARLFTAYLQ
LYRGFTLGVEDILVKPGANKKRKKIINESVKCGIKALQAAFSLPASAEVSEARSRWQDAH
LSTDQRDQHMVDLKFKEEVNLVNNNINKVCMPLGLHRRFPDNNLQLMVQSGAKGSTVNTM
QISCLLGQIELEGRRPPLMPSGKSLPCFQAYDVSPRSGGFVSGRFLTGIRPPEYFFHCMA
GREGLVDTAVKTSRSGYLQRCVIKHLEGLVVQYDLTVRDSDGSVVQFLYGEDGLDIPKTP
FLQRRQLPFVRDNCEVIRTSKCLDEVLSKMDPQEVESHFRAIERWKAKQQAASARQGAFL
LFSQKKLAKLKSQNPPGGLQEGRDGCSLQLMERWQSLDDSGRQKYTKKAQRCPEPCLSIF
RPDVCFGSVSETFHDVVEEYLDECGARMGTATHIENTDIDRLRSLLQLKWQRALCDPGEA
VGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILLIASSNIKTPMMSIPVMN
SRRALKKAKNLKKKLTRVCLAEVLHKVEVEETIRVEGKLKKNNVFKITFHFLPPECYKQE
KLLTPQQILHYMETRFLHLLLLAIKKRSSKLASINRVDARKATQKDADQEAGEASGTQDG
GDTEMEDIGNAADAEADEGDADATDAKRREKQSEEVDYESEGEENDGEDLFEEKEESTPN
AEEGEENDEEEQLLGSPHPFPAKSPAATPDPTQPEDQNQLRVNRVLDLSTAIESYRYDSQ
SDLWCEVMLALPLSNVRLDLTSLVASQAQSAIVHEIKGISRCLLSEVTSQHGEKRLLLNT
EGINLQEVIKYGDILDLNRLYSNEIHAMANTYGIEVAVRVIEKEIKDVFAVYGIEVDPRH
LSLVADYMCFEGEYKPLNRFAIESSSSPLQQMTFETSYKFLKQATMMGSQDKLCSPSACL
VVGKVVKGGTGLFDLKQPLQ
NT seq
5103 nt
NT seq
+upstream
nt +downstream
nt
atgctggttgacaaagagataccgtggaggcgccttgaaggcgtgtcatttggcatgtac
tcggctgaagaaataaggaagttgagtgtgaaggcgataactaacccgagatttctggac
aatgttggaaaccctgcgtctaatggcctgtacgacctctcgcttgggccgtccgacacc
aaagaagtttgcactacctgcatgcagggctttaacaactgccccgggcacctcggacac
atagagctgccgctccctgtctacaacccgctcctctttgataaactctacctgctgatc
cgcggctcctgtatgagatgccagatgctgagctgcccccgttctgccatccacctcttg
ctccagcagctgcgggtgctggaggtgggggcccttgaagctgtttacgagctggaggca
gagctcaatcggtatctggaggggaatgtgaaggccacgggtgtagagatccaggaggtg
ctggaggactacactgccggctttctaaggaaatggaaggacagagactccgctttcccg
gtcaagcgtgtctgtcagtgtaaaaaccagctcgttcaaacattttggagggaaaacatg
atacctaggaagtgtccaaactgcaaggctggccgaccgcaagtacgcaaggaacacaac
agcaagctgatcgttactctgcccgcatcaaagctcaaggaaacccaggagcaaggagac
gtcatcgatggatctcagctggggaagagagggtacctgacgccgagcacagccaaggag
cacgtggccggtctctggaagaatgaaggcttcttcctgaagcacctcttctcaggactg
gatgtctgtgagggctccaacgcagacatcagccaggagatcttctttctgcagctgatg
gtggtccccccatcgagatatcggccagttaattgcctgggggaccagatgtttacgaat
ggacagacggtcaatatgcaggctgtgatgaaggacagcgtggtcatccagaagctgctg
gctcttatggccaatgagaaggcccgacaattggagtctgaagaagtggaagtgaatcag
actgatcagagcttcctggctggtgttccgggggtgaccctcaccgataagctgtacaac
atgtggatccgcctgcagagtcacgtcaacattgtgttcgacagtgacatggacaagctg
atgactgagaaatttcctggaatccgtcagatcttggagaaaaaggaaggtcttttccgg
aagcacatgatgggcaagcgtgtggattacgctgcccgctctgtcatttgtcctgatatg
tacattggcaccaatgagatcggaatacccatggtctttgccaccaagctgacctacccc
cagccggtgacgccgtggaacgtgaaggagctacggcaggcggtgatgaacgggcccaac
gtgcacccgggtgcctccactgtcatcaacgaggacggcacgcgcaccatgctaagtgcc
acccaccgcacgcagcgggaggccatcgccaagcagctgctcacccccgcgcctggcccg
caccgcatgcccatgaagattgtgaaccggcacattaagaacggtgacgtgctgcttctg
aaccggcagcccacgctgcaccggccgtccatccaagcccactgcgcccgaatcctgcct
gcggagaaggtgctgcggctgcactatgccaactgcaaggcctacaacgccgactttgac
ggcgatgagatgaacgcccacttcccccaaagtgagctcggccgggcggaggcctacacc
ctggtcagcaccactcagcagtacctggtaccgaaggatgggaagcctcttgccgggcta
attcaggaccacatggtatccggtaccagcatgaccatccgagggtgcttcttcacccgg
gagcagtacatggagttggtgtaccggggtctgacggacaggaggggcagagtgaagctc
cagccaccagccttgctgaagccctaccctctctggacaggaaaacaggtggtttccacc
ctgctgttaaatgtaattccagaaaatgaaatccccctaaacctgacagggaagtcgaag
atacccagcaaggcgtgggtgaaggactcgctgagagccattccccgatacaaccctgag
gacatgtgtgaatcgcaggttgttatccggcagggcgagcttctggtgggggtgctagat
aaggcccactatggcagctctgcctatggcctggtgcactgctgccatgagctgtatgga
ggccacaccagtggaaaccttctcagctgcctggcccggctcttcacggcgtacctccag
ctgtaccgcggcttcaccttgggtgtggaagacattttggttaaacctggagccaataag
aagagaaagaagatcattaatgagtcagtcaagtgtggaattaaggctctgcaagccgcc
ttcagcctccctgcatcagctgaggtcagtgaggccaggagccgctggcaggacgcccat
ctcagcaccgaccagagggaccagcacatggtcgacctcaagtttaaggaggaagtcaac
ctcgtcaacaacaacatcaacaaggtgtgcatgcctctaggactccatcgccgcttccca
gacaacaaccttcagcttatggtgcagtctggagcaaagggttccactgtaaacactatg
cagatttcctgcctgctggggcagattgagctggaaggaaggcgccctcctttgatgccc
tctgggaagtccctgccatgcttccaggcctatgacgtgtcgcctcgctcggggggcttt
gtttccggcaggttcctcaccggcatcaggcctccggaatatttcttccattgcatggcc
ggtcgtgaagggcttgtagacacggctgtgaagactagtcgctcaggatatcttcagagg
tgtgtcattaagcacctggagggcctggtggtgcagtacgacctgacggtgcgggatagt
gacggcagcgtggtgcagttcctctacggggaggacggcctggacatccccaagaccccg
ttcctgcagcgtcgtcaactgccctttgtcagggacaactgtgaggtcatcaggacgtcc
aagtgcttggatgaagtgctatccaagatggatccccaggaggtggaaagccatttcaga
gccatagagaggtggaaggctaagcagcaggcggcctcggcccgacagggggccttcctg
ctcttctcgcagaagaagctagctaagctgaagtcccagaacccgcctgggggtctacaa
gaggggagagatggctgcagtcttcagctgatggagagatggcagtcgctggacgactct
ggccgacagaagtatacaaagaaggcccagcgctgccccgagccgtgtctgtccatcttc
cggcctgacgtgtgcttcggatccgtctccgagacctttcatgatgtcgtagaggagtac
cttgatgaatgtggagctcgaatgggcacagcgacacacattgagaacacagacatagac
aggctgagatccctgctccagctgaagtggcagagggccctgtgtgaccccggggaggct
gtcgggctacttgccgcccagagcatcggggagccgtccacgcagatgaccctcaacacc
ttccactttgctggaaggggagagatgaacgtcacgctggggatccccaggcttagggaa
atcctcttgatcgcaagctcaaacatcaagactcccatgatgagcatccctgtgatgaac
tccagaagagcgttgaaaaaggcgaaaaacctgaagaagaagctgacccgagtgtgtttg
gcagaggtcctgcacaaggtggaagtggaggagacaatccgggtggagggcaagctaaag
aagaacaacgtcttcaaaatcactttccacttcctgcctccggagtgctacaaacaggaa
aagctgctcacgccccagcaaattctacactatatggaaacaagatttctgcaccttctg
cttctggccataaagaaacgcagctccaagctggcatccataaaccgtgtggatgcgcgt
aaagccacccagaaggatgctgaccaggaagctggcgaggccagtgggactcaggatggc
ggagacacagagatggaagacatcggtaatgcagcggatgcggaggctgatgagggggat
gcagacgctacagatgcaaagaggagagaaaaacaatcagaggaggtggattatgaaagt
gagggggaggagaatgatggagaagacctgtttgaggaaaaagaggaatcaacccccaat
gcagaagagggggaggagaatgatgaggaagagcagcttctggggagtcctcacccgttt
ccggcaaaatctccagctgccactccagacccaacccagccggaggaccagaaccagctc
cgggtgaacagggtgctggatcttagcactgcaattgaaagttacagatatgacagccaa
agtgacctctggtgtgaggttatgctggctttacctctcagcaatgtacgccttgacttg
acttcgctggtggcatctcaggcccagagtgccattgtgcatgagatcaaaggtatttcc
cgctgcctgctcagcgaggtcaccagtcagcatggcgagaaacgactattgcttaacaca
gaaggcatcaacctgcaggaggtcatcaagtatggtgacattcttgacttgaaccgcctg
tattccaatgagatccatgccatggcaaacacatatggcatcgaagtggcagtcagggtc
attgagaaggaaatcaaggatgtctttgctgtctacggcattgaagttgacccccgccac
ctgtccctggtggctgattacatgtgctttgaaggcgagtacaagccactaaaccgcttc
gccattgagtccagctcctctccactgcagcagatgaccttcgagaccagctacaagttc
ctgaagcaggccaccatgatgggatcccaagacaagttatgctctccttctgcctgtcta
gtggtcggtaaggtcgtcaaaggtggaacaggactttttgatctgaagcaacctctgcaa
tag
DBGET
integrated database retrieval system
