Paramormyrops kingsleyae: 111838044
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Entry
111838044 CDS
T05788
Symbol
sympk
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
pki
Paramormyrops kingsleyae
Pathway
pki03015
mRNA surveillance pathway
pki04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pki00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111838044 (sympk)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
111838044 (sympk)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pki03021
]
111838044 (sympk)
03019 Messenger RNA biogenesis [BR:
pki03019
]
111838044 (sympk)
Transcription machinery [BR:
pki03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
111838044 (sympk)
Messenger RNA biogenesis [BR:
pki03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
111838044 (sympk)
U7-dependent histone pre-mRNA processing factors
111838044 (sympk)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
PDS5
Adaptin_N
Cnd1
INTS1_R4
IBN_N
Motif
Other DBs
NCBI-GeneID:
111838044
NCBI-ProteinID:
XP_023656370
Ensembl:
ENSPKIG00000017132
LinkDB
All DBs
Position
Unknown
AA seq
1241 aa
AA seq
DB search
MASGSGENASVRTRVASQFFAGEEDAAIDMTTSEKVVDLLNQAALISTENKLTVLKQVQE
LIINKDPSLLDNFLDEIIAFQTDKSMEVRKFVIGFIEEACKRDNELLLKLIANLNMLLKD
ESVNVVKKAILTLTQLYKVALQWLVRSKVVSDMQEACWDMVTQMKGDVLALLDSDNDGVR
THAIKFTESLIITLSSRTADSDTPRRQEGDISLDKIPKDHSYIRSETLCEEGKSALEQLL
KFMVHPAISSINLTTALGSLATVARQRPMFMSDVVQAYETLHANLPPTLAKSQVSSVRKN
LKLHLVSVLRHPCSLEFQGQISTLLLDLGMTQGDITRCTPAPRDVRKRARHDAYTEGKKI
KMEPNLIEDDEDKEDPPPVSSPKPSLVPGSQSAIDLTADFLLPLLTPENVANLVLISMVY
LPDAMPASFQATYTPVESAGTDAQIKHLGRLMATQMTSAGIGPGLEQCKARDEEMKEGAE
EEGGPESSSSARDLLIKRKVSAVSLGQAISVLGAYGGKNQPSDVEEAPQVKRLPEPILPS
TQTKAPGTTGRKKVFRLADVIQPLNDVQVDKLTNMAVKRILQAEKAIACSGMAHVRVKLL
SRLVTQFDGAMKEDVLQFILEDMRSRSDLAFSLLYQEYNGYLSQLPAGSLDTYDHCLITL
LSGLQEKPEQRDGLFTKLVLEAPLITESALEVIRRYCEDESRVYLGMTTLKELIMKRPSR
QFQYLHVLLDLSSHEKEKVRSNALTFIKRMYERDQLRDYIEKFALNYMQLLVHPNPPSLL
FGADKDTEVASPWTEETVRQCLYLYLSLLPLNHRLVHELASVYTEAIADIKRTVLRVIEQ
PIRGMGMSSPDLLLLVENCPKGAETLVTRCLHILTDKVPPSPELVERVRDLYHKRVPDVR
FLIPVINGLEKKEVIQALPKLIKLNPIVVKEVFNRLLGTQHSEGSSSMSPLTPGELLISL
HNIDSTKCDMKSIIKATNLCFGEKNVYTSEVLAVVMQQLMEQNPLPMLLMRTVIQSLTMY
PRLGGFVMNILSRLIQKQVWKYPKVWEGFVKCCQRTKPQSFNVLLQLPPAQLSSVFERCP
EMREPLLQHVHSFTPHQQAHIPSSIMVVLEASVKQEIQPLAAVDQEMEPPVPVPVPVVLP
EALTVSQQDMDSQNQQYPVNEEEELEPMEEGEPVLATEDNLANVVPQGESLMPESSVPTT
VEEADEQMEGAVMEPADGVDQAKEVLEDTSAEAETDPGDTE
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgggtagtggggaaaatgcaagcgtgaggacgagggtggcttcacagttcttc
gccggggaagaagatgctgctattgacatgaccactagtgaaaaggttgtggatctgttg
aaccaagctgcactgatatcaactgagaacaagcttacagttttgaagcaggtgcaggaa
ctgataattaataaagacccttcacttctcgacaattttttagatgaaatcatagctttc
cagactgataaatcgatggaagttcggaaatttgtaatcggattcattgaggaggcctgt
aagagggataatgagctgctgctgaagctgattgccaacttgaacatgctactgaaagat
gagagtgtcaacgtggtgaagaaggccatccttaccctcacgcagctctataaagtggcc
ttgcagtggctggtgcgctccaaggtggtgtctgacatgcaggaggcctgctgggacatg
gtgacgcagatgaaaggggatgtgctggccctcttggactccgataacgacggcgtgcgc
acccatgccatcaaatttacggagtcgctcatcatcacactgtcctctcggacggcagac
tccgatacgcctcgtcgtcaggagggcgacatcagtctggacaagataccaaaagatcat
tcgtatatccgctctgaaacactgtgtgaggagggaaagtcggccttagaacagcttctg
aagttcatggtgcaccctgcgatttccagcattaatctgaccaccgccctgggctccctg
gccactgtggcccggcagcggcccatgttcatgtcggatgtggtgcaggcctacgagact
ctccacgccaacctgcctccgacgctggccaagtcgcaagtgagcagcgtgcgcaagaac
ctgaagctgcacttggtgtccgtcctgcgacacccctgcagcctggagttccagggtcag
atcagcacgctgctgctggacctgggcatgacacagggcgacatcacccgctgcacaccg
gccccgcgcgacgtacgcaagcgtgcccggcatgacgcctatacagagggcaagaagatc
aagatggagcccaatctcatagaagatgacgaagataaagaggaccccccaccagtgtca
tccccaaagccgtcgctggtcccaggatcccagtctgccatcgaccttactgccgacttc
ctgctcccgctgctaactccggagaacgtcgccaacctggtgctgatcagcatggtgtac
cttcctgatgccatgccagcctcgttccaggccacctacacgcctgtagaatccgccggc
accgatgctcagattaagcacctgggcaggctcatggcgacccagatgacctcagccgga
attgggcccgggctggagcagtgcaaggcgagagatgaagagatgaaggagggggcagag
gaagagggtggccctgaatcttcatcaagcgccagggaccttttgatcaagcgcaaggtg
tccgccgtgtccttgggacaggcgatctccgtgctgggggcttatgggggcaagaaccag
cccagcgatgtggaggaagctccccaagttaagagactacctgagccaatcctgccctcc
acacagaccaaagctcctggcacaactggacggaagaaggtgttcagattggccgacgtg
attcagcctctcaatgatgtccaggtggataagctgaccaacatggcagtcaagcgcatc
cttcaagctgaaaaagccatcgcttgcagtgggatggcccatgtacgggtgaagctgctg
tccaggctggtgacccagtttgatggcgcgatgaaggaggacgtgctgcagttcatcttg
gaggacatgcgtagccgcagcgacctggccttctcgctcctttaccaggagtataacggc
tacctcagccagctgcccgccggctccctggacacctatgaccactgtctcatcactctg
ctgtcaggcctgcaagagaagcctgagcagagggacgggctgtttacgaagctggtgctg
gaggctcccttaatcaccgaatccgcccttgaagtcatccggcgctactgtgaggacgag
tcacgggtgtatctgggcatgaccacactgaaggagctcatcatgaagcgaccctccagg
cagttccagtacctgcatgtcctgctggacctcagctcccatgagaaggaaaaggtgcga
tccaacgctctgaccttcatcaagcgcatgtacgagagggaccagctgagggactacatc
gaaaagtttgcgctgaactacatgcagctcctcgtccaccctaaccccccatccctactc
tttggggcagataaggacacagaggtcgcctctccctggactgaggagactgtcaggcag
tgtctgtacctgtacctctctctcctgccgctgaaccaccggctggtccacgagctggcg
tccgtgtacaccgaggccattgctgatatcaaacgcaccgtgctccgcgtcatcgagcag
cccatacggggaatggggatgagctctccagatttgctgctgctggtggagaattgcccc
aagggggcggagacactggtcacacggtgtttgcacatcttgactgataaagtacctcct
tctccagagctggtggagagggtgagggacctgtaccacaaacgggttccagatgtccgc
tttctcatccctgttatcaatggcctggagaagaaagaggtgatccaggccctgccaaag
cttattaaactcaaccccattgttgtgaaggaggtgttcaatcgtctgcttggcacacag
cacagtgaaggcagttcctccatgtctcccctcactccgggcgagcttctcatctctctg
cacaatattgactccaccaagtgcgacatgaagtccatcatcaaagccaccaatctctgc
tttggggagaagaacgtgtacacgtccgaggtgctagctgtggtgatgcagcagctgatg
gagcagaatccccttcccatgctgttgatgcgcaccgtcatccagtcgctcaccatgtac
ccgcggctgggcggcttcgtcatgaacatcctgtcccgcctcattcagaagcaggtgtgg
aagtaccccaaagtgtgggaaggatttgtgaagtgctgccagcgcacgaagccgcagtcc
ttcaacgtgctgctgcagctcccccccgcgcagctctccagcgtcttcgagcgctgcccc
gagatgagggagcccttgcttcagcacgttcactccttcaccccccaccagcaagcccat
atcccgtcctccatcatggtggtcctggaggccagtgtcaagcaggagatccagccattg
gcagctgtggatcaagagatggagcctccagttccagttcctgtgccagtagtgttacca
gaagctctaactgtgtcacagcaagacatggattcacagaaccagcagtatccagtgaat
gaggaagaggagttggagccaatggaggaaggcgagcctgttttggccactgaggataat
ctggcaaatgttgttccacagggggaaagcctcatgccggagagctctgtacctacgact
gtggaggaggcggatgagcagatggaaggagccgtcatggagccagctgatggagtcgat
caggccaaagaagtcctggaggacaccagtgcagaggcagagactgatcctggggacacc
gaatga
DBGET
integrated database retrieval system