KEGG   Paramormyrops kingsleyae: 111838044
Entry
111838044         CDS       T05788                                 
Symbol
sympk
Name
(RefSeq) symplekin
  KO
K06100  symplekin
Organism
pki  Paramormyrops kingsleyae
Pathway
pki03015  mRNA surveillance pathway
pki04530  Tight junction
Brite
KEGG Orthology (KO) [BR:pki00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    111838044 (sympk)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    111838044 (sympk)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pki03021]
    111838044 (sympk)
   03019 Messenger RNA biogenesis [BR:pki03019]
    111838044 (sympk)
Transcription machinery [BR:pki03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     111838044 (sympk)
Messenger RNA biogenesis [BR:pki03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     111838044 (sympk)
    U7-dependent histone pre-mRNA processing factors
     111838044 (sympk)
SSDB
Motif
Pfam: Symplekin_C SYMPK_PTA1_N PDS5 Adaptin_N Cnd1 INTS1_R4 IBN_N
Other DBs
NCBI-GeneID: 111838044
NCBI-ProteinID: XP_023656370
Ensembl: ENSPKIG00000017132
LinkDB
Position
Unknown
AA seq 1241 aa
MASGSGENASVRTRVASQFFAGEEDAAIDMTTSEKVVDLLNQAALISTENKLTVLKQVQE
LIINKDPSLLDNFLDEIIAFQTDKSMEVRKFVIGFIEEACKRDNELLLKLIANLNMLLKD
ESVNVVKKAILTLTQLYKVALQWLVRSKVVSDMQEACWDMVTQMKGDVLALLDSDNDGVR
THAIKFTESLIITLSSRTADSDTPRRQEGDISLDKIPKDHSYIRSETLCEEGKSALEQLL
KFMVHPAISSINLTTALGSLATVARQRPMFMSDVVQAYETLHANLPPTLAKSQVSSVRKN
LKLHLVSVLRHPCSLEFQGQISTLLLDLGMTQGDITRCTPAPRDVRKRARHDAYTEGKKI
KMEPNLIEDDEDKEDPPPVSSPKPSLVPGSQSAIDLTADFLLPLLTPENVANLVLISMVY
LPDAMPASFQATYTPVESAGTDAQIKHLGRLMATQMTSAGIGPGLEQCKARDEEMKEGAE
EEGGPESSSSARDLLIKRKVSAVSLGQAISVLGAYGGKNQPSDVEEAPQVKRLPEPILPS
TQTKAPGTTGRKKVFRLADVIQPLNDVQVDKLTNMAVKRILQAEKAIACSGMAHVRVKLL
SRLVTQFDGAMKEDVLQFILEDMRSRSDLAFSLLYQEYNGYLSQLPAGSLDTYDHCLITL
LSGLQEKPEQRDGLFTKLVLEAPLITESALEVIRRYCEDESRVYLGMTTLKELIMKRPSR
QFQYLHVLLDLSSHEKEKVRSNALTFIKRMYERDQLRDYIEKFALNYMQLLVHPNPPSLL
FGADKDTEVASPWTEETVRQCLYLYLSLLPLNHRLVHELASVYTEAIADIKRTVLRVIEQ
PIRGMGMSSPDLLLLVENCPKGAETLVTRCLHILTDKVPPSPELVERVRDLYHKRVPDVR
FLIPVINGLEKKEVIQALPKLIKLNPIVVKEVFNRLLGTQHSEGSSSMSPLTPGELLISL
HNIDSTKCDMKSIIKATNLCFGEKNVYTSEVLAVVMQQLMEQNPLPMLLMRTVIQSLTMY
PRLGGFVMNILSRLIQKQVWKYPKVWEGFVKCCQRTKPQSFNVLLQLPPAQLSSVFERCP
EMREPLLQHVHSFTPHQQAHIPSSIMVVLEASVKQEIQPLAAVDQEMEPPVPVPVPVVLP
EALTVSQQDMDSQNQQYPVNEEEELEPMEEGEPVLATEDNLANVVPQGESLMPESSVPTT
VEEADEQMEGAVMEPADGVDQAKEVLEDTSAEAETDPGDTE
NT seq 3726 nt   +upstreamnt  +downstreamnt
atggcttcgggtagtggggaaaatgcaagcgtgaggacgagggtggcttcacagttcttc
gccggggaagaagatgctgctattgacatgaccactagtgaaaaggttgtggatctgttg
aaccaagctgcactgatatcaactgagaacaagcttacagttttgaagcaggtgcaggaa
ctgataattaataaagacccttcacttctcgacaattttttagatgaaatcatagctttc
cagactgataaatcgatggaagttcggaaatttgtaatcggattcattgaggaggcctgt
aagagggataatgagctgctgctgaagctgattgccaacttgaacatgctactgaaagat
gagagtgtcaacgtggtgaagaaggccatccttaccctcacgcagctctataaagtggcc
ttgcagtggctggtgcgctccaaggtggtgtctgacatgcaggaggcctgctgggacatg
gtgacgcagatgaaaggggatgtgctggccctcttggactccgataacgacggcgtgcgc
acccatgccatcaaatttacggagtcgctcatcatcacactgtcctctcggacggcagac
tccgatacgcctcgtcgtcaggagggcgacatcagtctggacaagataccaaaagatcat
tcgtatatccgctctgaaacactgtgtgaggagggaaagtcggccttagaacagcttctg
aagttcatggtgcaccctgcgatttccagcattaatctgaccaccgccctgggctccctg
gccactgtggcccggcagcggcccatgttcatgtcggatgtggtgcaggcctacgagact
ctccacgccaacctgcctccgacgctggccaagtcgcaagtgagcagcgtgcgcaagaac
ctgaagctgcacttggtgtccgtcctgcgacacccctgcagcctggagttccagggtcag
atcagcacgctgctgctggacctgggcatgacacagggcgacatcacccgctgcacaccg
gccccgcgcgacgtacgcaagcgtgcccggcatgacgcctatacagagggcaagaagatc
aagatggagcccaatctcatagaagatgacgaagataaagaggaccccccaccagtgtca
tccccaaagccgtcgctggtcccaggatcccagtctgccatcgaccttactgccgacttc
ctgctcccgctgctaactccggagaacgtcgccaacctggtgctgatcagcatggtgtac
cttcctgatgccatgccagcctcgttccaggccacctacacgcctgtagaatccgccggc
accgatgctcagattaagcacctgggcaggctcatggcgacccagatgacctcagccgga
attgggcccgggctggagcagtgcaaggcgagagatgaagagatgaaggagggggcagag
gaagagggtggccctgaatcttcatcaagcgccagggaccttttgatcaagcgcaaggtg
tccgccgtgtccttgggacaggcgatctccgtgctgggggcttatgggggcaagaaccag
cccagcgatgtggaggaagctccccaagttaagagactacctgagccaatcctgccctcc
acacagaccaaagctcctggcacaactggacggaagaaggtgttcagattggccgacgtg
attcagcctctcaatgatgtccaggtggataagctgaccaacatggcagtcaagcgcatc
cttcaagctgaaaaagccatcgcttgcagtgggatggcccatgtacgggtgaagctgctg
tccaggctggtgacccagtttgatggcgcgatgaaggaggacgtgctgcagttcatcttg
gaggacatgcgtagccgcagcgacctggccttctcgctcctttaccaggagtataacggc
tacctcagccagctgcccgccggctccctggacacctatgaccactgtctcatcactctg
ctgtcaggcctgcaagagaagcctgagcagagggacgggctgtttacgaagctggtgctg
gaggctcccttaatcaccgaatccgcccttgaagtcatccggcgctactgtgaggacgag
tcacgggtgtatctgggcatgaccacactgaaggagctcatcatgaagcgaccctccagg
cagttccagtacctgcatgtcctgctggacctcagctcccatgagaaggaaaaggtgcga
tccaacgctctgaccttcatcaagcgcatgtacgagagggaccagctgagggactacatc
gaaaagtttgcgctgaactacatgcagctcctcgtccaccctaaccccccatccctactc
tttggggcagataaggacacagaggtcgcctctccctggactgaggagactgtcaggcag
tgtctgtacctgtacctctctctcctgccgctgaaccaccggctggtccacgagctggcg
tccgtgtacaccgaggccattgctgatatcaaacgcaccgtgctccgcgtcatcgagcag
cccatacggggaatggggatgagctctccagatttgctgctgctggtggagaattgcccc
aagggggcggagacactggtcacacggtgtttgcacatcttgactgataaagtacctcct
tctccagagctggtggagagggtgagggacctgtaccacaaacgggttccagatgtccgc
tttctcatccctgttatcaatggcctggagaagaaagaggtgatccaggccctgccaaag
cttattaaactcaaccccattgttgtgaaggaggtgttcaatcgtctgcttggcacacag
cacagtgaaggcagttcctccatgtctcccctcactccgggcgagcttctcatctctctg
cacaatattgactccaccaagtgcgacatgaagtccatcatcaaagccaccaatctctgc
tttggggagaagaacgtgtacacgtccgaggtgctagctgtggtgatgcagcagctgatg
gagcagaatccccttcccatgctgttgatgcgcaccgtcatccagtcgctcaccatgtac
ccgcggctgggcggcttcgtcatgaacatcctgtcccgcctcattcagaagcaggtgtgg
aagtaccccaaagtgtgggaaggatttgtgaagtgctgccagcgcacgaagccgcagtcc
ttcaacgtgctgctgcagctcccccccgcgcagctctccagcgtcttcgagcgctgcccc
gagatgagggagcccttgcttcagcacgttcactccttcaccccccaccagcaagcccat
atcccgtcctccatcatggtggtcctggaggccagtgtcaagcaggagatccagccattg
gcagctgtggatcaagagatggagcctccagttccagttcctgtgccagtagtgttacca
gaagctctaactgtgtcacagcaagacatggattcacagaaccagcagtatccagtgaat
gaggaagaggagttggagccaatggaggaaggcgagcctgttttggccactgaggataat
ctggcaaatgttgttccacagggggaaagcctcatgccggagagctctgtacctacgact
gtggaggaggcggatgagcagatggaaggagccgtcatggagccagctgatggagtcgat
caggccaaagaagtcctggaggacaccagtgcagaggcagagactgatcctggggacacc
gaatga

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