Paramormyrops kingsleyae: 111840701
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Entry
111840701 CDS
T05788
Symbol
sf3b1
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
KO
K12828
splicing factor 3B subunit 1
Organism
pki
Paramormyrops kingsleyae
Pathway
pki03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pki00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111840701 (sf3b1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pki03041
]
111840701 (sf3b1)
03036 Chromosome and associated proteins [BR:
pki03036
]
111840701 (sf3b1)
Spliceosome [BR:
pki03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
111840701 (sf3b1)
Complex B
111840701 (sf3b1)
Complex C
U2 SnRNP specific factors
111840701 (sf3b1)
Chromosome and associated proteins [BR:
pki03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
111840701 (sf3b1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
HEAT_ECM29
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
Adaptin_N
UNC45-central
DUF2298
Motif
Other DBs
NCBI-GeneID:
111840701
NCBI-ProteinID:
XP_023661564
Ensembl:
ENSPKIG00000000784
LinkDB
All DBs
Position
Unknown
AA seq
1313 aa
AA seq
DB search
MAKIAKTHEDIEAQILEIQGMKAALLEEGDQGVGLDSTGYYDQEIYGGSDSRFAGYVTSI
AANEQEDDDEEDSSTSLLGQKKPGYHAPVAILNAIPQSDEQYDPFAEHRPQKIADREDEY
KARRRQMIISPERLDPFADGGKTPDPKVQARTYMDVMREQHLTKEEKEIRQQLAEKAKSG
ELKVVNGSTASQAASAVKRKRRWDQTADQTPSNATPKKVSSWDQADAASETPGHTPSNSR
WDETPGRPRGSETPGATPSSRMWEPTPSHTPAGAATPGRGDTPGHATPGHGGATSSVRKN
RWDETPKTERETPGHGSGWAETPRTDRGDESVGETPTPGASKRKSRWDETPASQMGSSTP
LLTPGKTPIGTPAMNMATPTPGHLMSMTPEQLQAWRWEREIDERNRPLTDEELDAMFPEG
YKVLPPPAGYVPIRTPARKLTATPTPIGGMTGFHMQTEDRSLKSVNDQPSGNLPFLKPDD
IQYFDKLLVEVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPL
FNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARV
EGREIISNLAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAV
CKSKKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAA
LAEAATPYGIESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVML
ILIREFQSPDEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNYR
QLVDTTVELANKVGAAEIICRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQ
LIDGILYAFQEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQA
ADLISRTAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTP
PIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKK
AIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPA
LMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAV
VQHMSLGVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCL
QGLFHPARKVRDVYWKIYNSIYIGSQDALIAHYPHIYNDEKNPFIRYELEYFV
NT seq
3942 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcgccaaaacacacgaagacattgaggcccagatcctggagatccagggg
atgaaggctgccctgttggaggagggagatcagggtgtgggtctggattccactggttac
tatgatcaggagatctatggggggagcgacagccgctttgctggatatgtcacctctatc
gcagccaatgagcaggaggatgatgatgaggaagactcttccactagtcttctgggacag
aagaaaccagggtatcatgctccggttgctatactcaatgctattccacagtcagatgaa
cagtatgatccatttgctgagcaccgtcctcagaagattgctgaccgggaagatgagtac
aaagctcgtcggcgacagatgatcatctctcctgagcggctcgacccatttgcagatgga
ggcaaaacgccagaccccaaggtacaggcccggacgtacatggacgtcatgagggagcag
cacctcaccaaagaggagaaagagatccgccagcagctggcagaaaaggccaaatccgga
gaactgaaagttgtcaacggctccacagcctctcaggccgccagcgcagtgaagcggaag
cgacgctgggaccagactgccgaccagacgcccagcaacgccacgcctaagaaggtgtcc
agctgggaccaggctgatgccgcttcagagactccaggccacaccccctcaaacagccgc
tgggacgagacgcccggccggcccaggggcagcgagactcccggggccacacccagctca
cgcatgtgggagcccacgcccagccacacgccagccggagccgccacgccgggccgtggg
gacacacccgggcatgccacgccaggccacgggggggccacctccagtgtgaggaagaac
cgctgggacgagactccaaagacggagagggagacccctggccatggcagcggctgggct
gagaccccccgcaccgaccgcggcgatgagtctgtcggggaaacccccacccctggggcc
agcaaaagaaagtcccgctgggatgagacccctgccagccagatgggctcctccaccccc
ctcctgactccagggaagacccccattgggaccccagcgatgaacatggccacccccaca
cctggacaccttatgagcatgaccccagagcagctgcaggcctggcgctgggagagagag
attgacgaaaggaaccggccacttactgatgaggagctggatgccatgttcccagaaggt
tacaaggtgctgccacccccggcaggttatgtacccatccgcactccggcccgcaagctg
actgccactccaacccccatcggaggcatgactggtttccacatgcagactgaagatcgc
agcctgaaatcagtcaatgaccagccttctgggaacctccccttcctcaagcccgatgac
atccagtattttgacaagttgctggtggaagtggatgagtctactttaagcccagaggaa
caaaaggagcgtaaaatcatgaagcttctgctgaagatcaagaatggtactcctcccatg
agaaaggctgctcttcgtcagatcaccgacaaggctcgcgaatttggggcaggacccctc
ttcaaccagatcctgcccttgctcatgtcgcccacccttgaggatcaggagcgtcacctg
ctggtcaaggtcattgaccgtatcctgtacaagctggatgacttggtccggccgtatgtt
cacaagatcctggtggtgattgagcccctcttgatcgatgaggattactatgccagagtg
gaaggcagagaaatcatctctaacttggccaaggcggcaggtttggccaccatgatctcc
accatgaggcctgatatcgacaacatggatgagtacgtgaggaacacaacagcccgcgcc
ttcgcagtggtggcttccgccttgggcatcccgtccctcctgcccttccttaaggctgtg
tgcaagagcaagaagtcatggcaggcgcgccacaccgggatcaagatcgtgcagcagatc
gccatcctcatgggctgtgccatcttgcctcacctgcgtagcttggtggagatcattgag
catgggctggtggacgagcagcagaaggtgcgcacaatcagtgccctggccattgccgct
ttggctgaggcggccaccccttacggtattgagtcgttcgactctgtgctcaagcctctc
tggaagggtattcgacaacacagaggcaagggtctggctgccttcttgaaagccattggt
tatctgatccccctgatggatgctgaatatgccaactactacaccagggaagtgatgttg
atcctcatcagagagttccagtcccctgatgaggaaatgaagaagattgtactcaaggtg
gtgaagcagtgctgtggcactgatggtgtcgaggccaactacattaagactgaaatcctg
ccacctttcttcaagcacttctggcagcataggatggctctggatcgacgcaactacaga
cagctggtggataccactgtggaactggccaacaaggtgggtgcagcagagatcatctgc
cgaattgtggacgatctgaaagatgaagcagagcagtacagaaagatggtcatggagacc
attgagaagatcatgggtaacctaggtgctgcagacattgaccataagctggaggaacag
ctcattgatggcatcctctacgccttccaggaacagaccacagaggactctgtgatgctg
aatggctttggtacagtggtcaatgcccttgggaagcgggtgaagccctacttgcctcag
atctgcggtacggtcttgtggcgtctcaacaacaaatccgcaaaggtgcgacagcaggcg
gccgaccttatttcccgcactgccgtggtgatgaagacctgtcaagaggagaagctaatg
ggtcacttgggtgtggtcttgtatgaatacctgggagaggaataccctgaagtgctgggc
agtattttgggagccctgaaggccattgtcaatgtcattggcatgcataaaatgacccca
cccatcaaagaccttctgccccgcctgacacccatcttgaagaacaggcacgagaaggtg
caagaaaactgcattgacctggtgggccgaattgctgacaggggtgcggaatatgtgtct
gcccgagaatggatgaggatctgctttgagctgctggagttattgaaggcccacaagaaa
gccattcggagagccactgtcaacaccttcggctacatcgccaaggccattggtcctcat
gatgtgctggccaccctgctgaacaacctgaaggtacaggaacgtcagaaccgtgtctgc
accacggtggccattgctattgtagccgagacctgctcacctttcaccgtgctccccgcg
ctcatgaacgagtaccgagtgcccgaactcaacgtccagaatggcgtgctcaagtccctc
tccttcctcttcgagtacatcggagaaatgggcaaggattatatatatgccgtcaccccc
cttctggaagatgccctcatggacagggacctggtgcatcggcagacagccagcgccgtc
gtccagcacatgtccctgggcgtctacggctttgggtgcgaggactctctcaaccacctg
ctgaactacgtgtggcccaacgtatttgagacgtcgccacacgtcatccaggcggtgatg
ggcgctctggagggcctgcgggtcgccatcgggccctgccgcatgctgcagtactgtctg
cagggtctgttccacccagccaggaaggtacgtgatgtgtactggaagatctacaactcc
atctacattggatctcaggatgctctgattgctcactatccgcacatctacaacgacgag
aagaaccctttcatccgctatgagctggagtacttcgtatag
DBGET
integrated database retrieval system
