Paramormyrops kingsleyae: 111841411
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Entry
111841411 CDS
T05788
Symbol
ddx6
Name
(RefSeq) probable ATP-dependent RNA helicase DDX6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
pki
Paramormyrops kingsleyae
Pathway
pki03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111841411 (ddx6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pki03019
]
111841411 (ddx6)
03036 Chromosome and associated proteins [BR:
pki03036
]
111841411 (ddx6)
Enzymes [BR:
pki01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111841411 (ddx6)
Messenger RNA biogenesis [BR:
pki03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
111841411 (ddx6)
mRNA degradation factors
5'-3' decay
Decapping complex
111841411 (ddx6)
Chromosome and associated proteins [BR:
pki03036
]
Eukaryotic type
Gene silencing
piRNA pathway
111841411 (ddx6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CMS1
AAA_22
AAA
NA-iREase2
Motif
Other DBs
NCBI-GeneID:
111841411
NCBI-ProteinID:
XP_023662884
Ensembl:
ENSPKIG00000013728
LinkDB
All DBs
Position
Unknown
AA seq
484 aa
AA seq
DB search
MSTARTENPVILGLSSQNGQLRGSVKPAGGPSGGGGGAQLQPTSQVKSSSTINNGSSQPM
PTANTVIKPGDDWKKNLKLPPKDMRMKTSDVTATKGNEFEDYCLKRELLMGIFEMGWEKP
SPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERIDLKKDCIQALVIVPTRELALQ
VSQICIQVSKHMGGVKVMATTGGTNLRDDIMRLDETVHVVIATPGRILDLIKKGVAKVDQ
VQMIVLDEADKLLSQDFVQMMEEILSFLSKQRQILLYSATFPLSVQKFMGSHLQKPYEIN
LMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGY
SCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLGETYL
HRIGRSGRFGHLGLAINLITYDDRFNLKGIEEQLGTEIKPIPGSIDKSLYVAEYHSESGE
ELKL
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgctagaacagagaacccagtgatcctgggattgtccagtcagaatggtcag
ctacgaggatcagtgaagccagcagggggccccagtggtggcgggggtggggcccagctg
cagccgaccagtcaggtaaagtcatccagcacaatcaacaacggcagctcccagcccatg
cccacagccaacacagtcatcaagcctggagatgactggaagaagaatctaaaacttcct
cctaaagatatgagaatgaaaacttcggatgtgacggccacaaaaggcaatgagtttgaa
gattattgcctgaagagggagctcctgatggggatctttgagatgggttgggagaaaccc
tcacccatccaggaggaaagcattcccattgcgttgtctgggagggacatcctggccaga
gccaagaacggcactggcaaaagtggcgcctacctcattcccttacttgaacgcattgac
ctgaagaaggactgcatacaggccctggtcattgtgcccaccagagaactggctctgcag
gtgagccagatctgcatccaggtcagcaaacacatgggtggggtaaaagtcatggccacc
acagggggcaccaaccttcgcgatgacatcatgaggctcgacgagacggtgcatgttgtc
attgctacccccggaaggattctggatctcatcaaaaagggagtggccaaagtggatcag
gtgcagatgattgtgctggatgaggcggacaagctcctgtcccaggactttgtgcagatg
atggaggagattctgagtttcttgtcgaaacagaggcagatcttgctgtattcagccacg
tttccacttagcgtgcagaaattcatgggctcccatctgcagaagccgtatgagattaac
ctgatggaggagctgactctgaagggagtgacccagtattacgcctatgtgactgagaga
cagaaagtccactgccttaacacgctcttctcccggctccagattaatcagtctataatc
ttctgcaactcatcccaacgtgttgagttgctggccaagaagatctcccagctgggctac
tcctgcttctatattcacgccaagatgagacaggagcaccgtaaccgcgtgttccatgac
ttcagaaacggcctctgtcggaatctcgtctgcactgacctcttcaccagaggaattgac
attcaagctgtgaatgtggtgatcaacttcgattttcccaagctgggagaaacgtacctg
catcgcattggccggtctggacgttttggacatctgggcctggccatcaacctgatcacg
tacgacgaccgcttcaacctgaagggcatcgaggagcagttggggacggagatcaagccc
attccaggcagcattgacaagagcctgtatgtggcagaatatcacagcgagagcggggag
gagctgaaactctga
DBGET
integrated database retrieval system
