KEGG   Paramormyrops kingsleyae: 111842831
Entry
111842831         CDS       T05788                                 
Name
(RefSeq) spliceosome RNA helicase DDX39B
  KO
K12812  ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
Organism
pki  Paramormyrops kingsleyae
Pathway
pki03013  Nucleocytoplasmic transport
pki03015  mRNA surveillance pathway
pki03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pki00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111842831
  09122 Translation
   03013 Nucleocytoplasmic transport
    111842831
   03015 mRNA surveillance pathway
    111842831
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pki03019]
    111842831
   03041 Spliceosome [BR:pki03041]
    111842831
Enzymes [BR:pki01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     111842831
Messenger RNA biogenesis [BR:pki03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     111842831
Spliceosome [BR:pki03041]
 Complex C
  Other components
   EJC/TREX
    111842831
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    111842831
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 Cas3-like_C_2
Other DBs
NCBI-GeneID: 111842831
NCBI-ProteinID: XP_023665635
Ensembl: ENSPKIG00000011324
UniProt: A0A3B3SJG9
LinkDB
Position
Unknown
AA seq 437 aa
MTENDVENELLDYEEDEVDGGGGVGDGGIGGTGGDALSLRKEGLKGSYVSIHSSGFRDFL
LKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVT
GQVSVLVMCHTRELAFQISKEYERFSKYMPAVKVGVFFGGLSIKKDEEVLKRESPHVVVG
TPGRILALSRNKSLNLRHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATL
SKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVV
IFVKSVQRCVALAQLLVEQNFPAIGIHRGMPQEERLARYQQFKDFQRRILVATNLFGRGM
DIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDARTLNDVQDRFEVNI
SELPEEIDISSYIEQTR
NT seq 1314 nt   +upstreamnt  +downstreamnt
atgactgagaatgacgtggaaaatgagctcttggattatgaggaagatgaagtggacgga
ggaggcggggtcggagatgggggcatcgggggaactggtggggacgctctctcactccgc
aaagaagggcttaaaggctcctatgtttccatccactcctcgggattccgggacttcctg
ttaaagccagagctcttgagagccatcgtggactgtgggtttgagcatccctctgaagtt
cagcatgagtgcatccctcaagccatacttggaatggatgttctgtgccaggcaaaatct
ggcatgggaaagactgcagtgtttgttctggccaccctccagcagctggagcctgtcact
ggtcaggtgtccgtgttggtgatgtgtcacacccgggagctagcttttcagatcagcaag
gagtacgagcgcttctccaaatacatgcctgcagttaaggtgggggtctttttcgggggc
ctgtccatcaagaaagatgaggaagtgctgaagagagagagtccccacgtggtcgtgggc
accccaggccgaattctggctctgtcccgcaataaaagccttaacctgcgtcacatcaag
cacttcatcctggacgaatgcgacaagatgctggagcagctggacatgcgccgagacgtc
caggagattttccgcatgactccccacgagaaacaagtcatgatgttcagcgccaccctg
agcaaagagatccgacccgtctgcagaaagttcatgcaagatccaatggaaatctttgtg
gacgatgagaccaagctaaccctgcatgggctgcagcagtactatgtcaagctgaaggac
aacgagaagaacaggaagctctttgacctgctggatgtgttggagttcaaccaggtggtg
atcttcgtgaagtcggtgcagcgctgcgtggctctggcccagctgctggtggagcagaac
ttcccggccatcggcatccaccgcggcatgccccaggaggagaggctggcccgataccag
cagttcaaggacttccagcggcgaattctggtggccaccaatctgttcggccgtgggatg
gacatcgagagagtcaacatcgccttcaactacgacatgccagaggactcggacacctac
ttacacagggtggccagggcgggccggtttgggaccaagggcttggccatcacgttcgtg
tccgatgagaacgacgcgcgcacgctgaacgacgtgcaggaccgcttcgaggtcaacatc
agcgagctccccgaggagatcgacatctcctcctacattgagcaaacccgataa

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