Paramormyrops kingsleyae: 111843288
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Entry
111843288 CDS
T05788
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pki
Paramormyrops kingsleyae
Pathway
pki03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pki00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111843288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pki03041
]
111843288
03009 Ribosome biogenesis [BR:
pki03009
]
111843288
Enzymes [BR:
pki01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111843288
Spliceosome [BR:
pki03041
]
Complex A
U1 snRNP components
U1 related factors
111843288
Complex B
111843288
Ribosome biogenesis [BR:
pki03009
]
Eukaryotic type
Pre-60S particles
Helicases
111843288
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
111843288
NCBI-ProteinID:
XP_023666518
Ensembl:
ENSPKIG00000007686
UniProt:
A0A3B3S146
LinkDB
All DBs
Position
Unknown
AA seq
622 aa
AA seq
DB search
MPGYSDRDRGRDRGYGGGPPRFGGSRSGGSSGKYGNPGERLRKKHWNLEELPKFEKNFYQ
EHPDVTRRSTQEVEEYRRSKEITVKGRDCPNPTMKFHEASFPTYVMDVITKQNFTEPTPI
QAQGWPLALSGKDMVGIAQTGSGKTLSYLLPAIVHINHQPFLEHGDGPICLVLAPTRELA
QQVQQVSAEYGRASRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLR
RCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVQI
NVGALQLSANHNILQIVDVCNDGEKDDKLLRLLEEIMSEKENKTIIFVETKRRCDDLTRR
MRRDGWPAMGIHGDKSQQERDWVLNEFKFGKAPILIATDVASRGLDVEDVKFVINYDYPN
SSEDYIHRIGRTARSQKTGTAYTFFTPGNMRQASDLVSVLREANQAINPKLLQMAEDRGG
RSRGGRGGGYRDDRRDRYSSNRRDFGGFRDRDGDRGFDSGPKKAFGTSTQNGGYGAGGYD
AGIGAASAAYAAAYSSNGQSAFTANQATAFGAQNFQNQQFAAAQGATPDVMAHPQFPFAP
QQPPQQPPQPMVPYPLPPAFPQ
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgcctggttattcggacagagatcgtgggagagacagagggtatggcggtggaccacca
cgtttcgggggtagtaggagtgggggatcctccggaaagtacggcaatccgggcgaaaga
ctgcgcaagaagcactggaaccttgaggagctccccaagttcgagaagaacttctaccag
gagcatcctgatgtgacccggcggtcaacccaagaggttgaagagtacaggagaagtaaa
gagatcacggtgaaaggtagagattgcccaaaccctacaatgaagttccatgaagctagc
ttcccaacatacgtgatggatgtgatcaccaagcagaatttcacagaacccacgcctatc
caggctcagggctggcctttggctttgagtggcaaggacatggtgggaatcgcgcagact
gggtctggcaaaaccctttcgtacttgttgccagccattgtccatattaaccaccagcct
tttctggagcatggggatggcccaatttgcctggttctggccccaactcgggagttggcg
cagcaagttcagcaggtttcagctgagtacgggagggcttcccggctgaagtccacctgc
atctatggcggtgccccgaaaggaccacagatccgtgacttggagcgaggggtggagatc
tgtattgcgactcctggacgtctcattgacttcctggaggcagggaagactaaccttcga
cgttgcacttacctggttctggatgaggccgaccggatgctggacatggggtttgagccg
cagatccggaagatcgtggaccaaatcaggcctgacaggcagacgctcatgtggagcgcc
acctggcccaaggaggtgcggcagctggctgaggacttcctgaaggagtacgtgcagatc
aacgtgggcgctctgcagctgagcgccaatcacaacatcctgcaaatcgtcgacgtctgc
aatgatggggagaaggatgacaaacttcttcgtttactggaggagatcatgagcgagaag
gagaacaagaccatcatttttgtggagacgaagcggcgatgtgacgacctcacaaggcgc
atgaggagggatggatggccagcgatgggcatccatggtgataagagtcaacaggagagg
gactgggttctgaatgagtttaaatttggaaaggctcccatccttattgccaccgacgtt
gcttcaagaggtctcgatgtggaagatgtgaagttcgttatcaattacgactaccccaac
tcctctgaggattacatccaccgcatcggccgcacggcccgaagccagaagacgggcacg
gcctacaccttcttcacccccggcaacatgaggcaggccagcgacctggtgtccgtgttg
cgtgaggccaaccaggccatcaatccaaagctcctccagatggcagaagacagaggaggt
cgttcaagggggggaagaggtggcggctatagggatgatcgacgggacaggtactcttcg
aacaggagggatttcggcggctttagggaccgagacggtgacaggggattcgacagcgga
ccaaaaaaggcattcggcaccagcacacagaacggaggctacggggccggcgggtatgat
gctggcatcggcgctgccagtgctgcctacgcggcagcttacagcagcaacggacagtca
gcctttaccgccaatcaggccactgcattcggggcccagaacttccagaaccagcagttt
gctgcagcccagggtgccacccccgatgtcatggcccacccccagttcccgttcgccccc
cagcagcctccacaacagcccccacagccaatggtcccttaccccctgcccccagcattc
ccgcagtga
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