Paramormyrops kingsleyae: 111843558
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Entry
111843558 CDS
T05788
Symbol
tdrd12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12 isoform X1
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
pki
Paramormyrops kingsleyae
Brite
KEGG Orthology (KO) [BR:
pki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pki03036
]
111843558 (tdrd12)
Enzymes [BR:
pki01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
111843558 (tdrd12)
Chromosome and associated proteins [BR:
pki03036
]
Eukaryotic type
Gene silencing
piRNA pathway
111843558 (tdrd12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
DEAD
Helicase_C
CS
Motif
Other DBs
NCBI-GeneID:
111843558
NCBI-ProteinID:
XP_023666988
Ensembl:
ENSPKIG00000006407
LinkDB
All DBs
Position
Unknown
AA seq
1441 aa
AA seq
DB search
MDCLVTLDYFLLPNATRDTSIVSLRRRIEQPGDFIVVLENPGNMEAGGPLLEIDILKIED
PSCFWGRIVKGAGVCVEDQEYQKLQVKMNLFYHEVNLDVQKLKPQLLEEGKVCVVYSPAM
RSWCRAVMESLFLSTAGSQVLCFLLDHAEHVIVDSDSIRAPLEKFLLLPFWVRRFQLAGI
YPLTLEVSACLQKATLKRAACWDRSATRYLHELIQASTLKEAVVCGQNAESTAVQLYLTI
RDIKICVNDELVTKRFACFSSARPEQSLQDYGADALLLASNTLASGKSPLRVQNDDMDVQ
SGTSRNAEITCEEKDGVDFWSGGNGQKVPENHLLHLSPEGVQVTAERVVHDGQTGAEAES
SGKQEKQANGSCPELAPETGTSHAEELSQKLNLLRVLWFLNPISKTGFDPKEDPEEVVSM
EGAGSVMLPDGSSSIVAACVGRADRHLAGDQAQEVTAHGRIGDELICARLLQFLNPDPLN
PDRDSSEMPFWQDPYRSRILMHSPMTFEPCGSLAAAPVSDGVRKALLQTGYGGPTLADCH
CWPPVSRGCDTLLVAQTGSDPMCYIPPFLTHLQLCAVRSALNSCSGPIAAVLCPGWQKAQ
RVSGVLEELPAGASLHPTLVLLGRGKAEAEAAHIPSNCRLLVTTPSSLLQLLQSCCFLFL
RLCHLVLDDVDLLYARVPQETCAVLQYFRKEERALSLRQLIAVGTRWSHHMEALVKESMR
DPCVIITVPEEAALYGNVRQMVLLCLETTKMSVLLNALDFVPDVAQKTLIFTSTAEETEE
VFKAVRTTAFFCLKVHEKLTHQFSFVVEQWKSDIGPGTHVILVTTDDCVRALHIDDATCV
VHYGFPRSPKVFGSRLYCMSRHFRNLSDKVCSSLPSREARSMLLLSEGHARHVVGLLRYL
ERTGTDLPHELLRFTRGLLQAKELQKSARPLCSYLKNFGFCRDDRVCPDRHQIDPQQDAP
RQPVSHNIQFVPLYIKNASCYYGRIVSGEGGLYEGLATDMAAHYSQEKIHAAGLMQGGLY
TVQEDDVYHRVQLLTTPDTEKRLFYSVNVCFLDEGREQEVKGHQLLELPSRFQTLPPQAV
EVIVCRVQPIDGEMDWNPKVTRYINQKIKGLQHQAKVVLSLGKTIWVDPMVRLTRPPGLK
TFISEYNVLSVILATGMAVTNPQHVELLKALSQEAFVEVPPGEISPTAIEEPGTGLTLPA
NATGSAANPAGEGPPTWVEVPAAAVKEAMALEPAADTLSCPALLEEPQSPSSTPTLEDSL
FSRDLESQAGTHRPMEAVPTGSPVNEVQFPVRSVENGLSRDLKVPVTEHTDPGQKGTATA
DAPQWFHPQIQWFQRMKSIVINIKLPNPTEQTCEFFSDRVMYSATVNGQQYRADLVLQGT
IEPDECTCEVKSGGPVLQLIKARSGLWERLLREKNVFVSLDFDHIEDEPEKPENGKIWDR
R
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
atggattgtctggtcaccctagactattttctgctaccgaacgccacacgtgacacatca
atcgtatcactgcgcagaagaatcgagcagcccggcgatttcattgtagtgctggaaaat
ccgggcaacatggaagcaggcggcccactgctggaaatcgacattttaaagatcgaggac
cccagctgcttctggggcaggattgtcaaaggtgctggtgtgtgtgtagaagaccaggaa
tatcagaagctgcaggtcaaaatgaacctcttctaccatgaggtcaacctggatgttcaa
aaactaaaacctcaattgctggaggaaggcaaggtgtgcgttgtctattcacctgccatg
aggagctggtgtagggctgttatggaatccctcttcctgagcactgctggctcccaggtc
ttgtgttttctgctggaccacgccgagcacgttattgtcgactcagacagcattcgagct
cctctggaaaagtttctcctgctgccgttctgggtgagacgcttccagctggctggtatc
taccccctgactctggaggtgtctgcctgcctgcagaaagccacactaaaacgtgcagcg
tgctgggaccgctctgccacacgctacctgcatgagctcattcaagcttctaccctgaag
gaggctgttgtctgtggtcagaatgcggagtccactgctgtccagctttatctcactatc
agggacataaagatctgcgtaaatgacgaacttgtgacaaagaggtttgcatgtttctca
agtgcgaggcctgagcagagcttgcaggactatggtgccgatgctctcctgctagcctcc
aacaccctcgcttctgggaagtctcctttgcgtgtgcaaaatgacgacatggatgtccag
tccgggacaagccggaatgcggagatcacatgtgaggaaaaagatggggttgatttttgg
tcagggggtaatggacagaaggttccagaaaaccaccttctccacctctcccctgagggg
gtacaggttactgcggaacgtgtagtgcatgacgggcagaccggggctgaagcagagagc
agcggcaagcaggagaagcaggccaatgggagctgtcctgaattagctccagagacagga
acctcccatgctgaggaactgtctcaaaaattaaacttgttaagggttttgtggttttta
aatcccatctcaaaaactggatttgatcccaaggaggaccctgaggaggtggtgtcgatg
gagggggctggttcagtaatgctgcctgatggatcgtccagcatagtggctgcctgtgtg
ggcagagctgaccgccatctcgctggagatcaagcccaggaggtgacagctcacggcagg
atcggagacgagctgatctgcgcacggctgttgcagtttctgaacccagaccctctgaat
ccagacagggattcttctgaaatgcctttctggcaggacccctacagaagcaggatcctg
atgcactcccccatgacctttgagccctgtggcagcctggccgccgcccccgtctctgac
ggcgtgcgaaaggctctcctgcagacgggctatggtggccccaccctggccgattgtcac
tgctggcccccagtgtctcgaggctgtgacactctgctcgtcgcccaaacgggcagcgac
cccatgtgctacatccctccgttcctgacccacctgcagctctgcgctgtccgcagtgcc
ctcaactcctgctccgggcccattgccgccgtgctgtgccccggatggcagaaggcccag
cgtgtctccggggtgctggaggagctgccagccggtgcctctctgcacccgacgctcgtg
ctgcttggccgggggaaggccgaggccgaggctgcacacatccccagcaactgccgcttg
ctggtcaccaccccctccagcctgctgcagctgcttcagtcgtgctgtttcctcttcctg
cggctctgtcacctggtgctggatgatgtggatctgctgtacgcccgggtccctcaggag
acgtgcgccgtcctgcagtacttccggaaagaggagcgagccctctccctgaggcagctc
atcgctgtgggaactcgctggagccaccacatggaggcgctggtgaaggagagcatgagg
gacccctgtgtcatcataacggtccccgaagaagcagctttatatggtaacgtgcgtcag
atggtcctgctctgtttagaaaccaccaaaatgtcagtgttgctcaatgctctggacttt
gtccctgatgtggcacagaagactcttatcttcaccagcactgcagaagaaaccgaagag
gtcttcaaggctgtcagaaccacggcatttttctgcctgaaggtccacgagaagctaacc
caccagtttagcttcgtggtggagcagtggaagagtgatatcgggccaggaactcacgtc
atcttggttaccaccgatgactgtgtgagggcactacacatcgacgatgctacctgtgtt
gtgcactacggcttcccacgctcacccaaagtgttcggaagccgcctgtactgcatgtca
aggcacttccggaacctctctgacaaggtgtgctcaagtctgccgtcccgtgaggcccgg
tccatgctgctgctgtcggagggtcacgcccggcacgtcgtcggactcctgcgctacctg
gagcggactggcacggatctgccccatgagctgctgcgtttcacccgtgggctcctgcag
gccaaggagttgcagaagtctgccaggcctctctgtagctacctgaagaattttggcttc
tgcagagacgacagggtttgccctgaccgacaccagatcgacccccagcaagacgcccca
cggcaaccagtctcccacaacatccaatttgtgcccctgtatattaagaacgcgtcctgt
tattacggacgcatagtcagcggggagggaggcctctacgagggcctggccacggacatg
gccgctcactattcccaggagaagattcatgctgcggggctgatgcagggaggcctttat
acggtgcaagaagatgatgtgtatcaccgggtccagctcctgacgaccccggacacagag
aagcgtctcttctacagcgttaacgtctgcttcctggacgagggccgggagcaggaagtg
aagggccaccagctgctggagctgcccagccgcttccaaacgctgcccccgcaggccgtg
gaggtcatcgtgtgccgggtccagcccatcgatggcgagatggactggaacccgaaggta
accagatacatcaatcagaaaattaaaggtctgcagcatcaggccaaagtcgtcctcagt
ctgggaaaaaccatctgggtggatccgatggtgcggctgacccggccaccgggcctgaag
accttcatcagcgagtacaacgtcctctcagtgatcctggccacggggatggctgttacc
aaccctcagcacgtcgagctgctgaaggcgctgtcccaggaggcattcgtggaggtcccg
cctggcgagattagccccactgccattgaggaaccggggaccggactgacgctccccgcc
aacgccacaggaagtgctgcaaacccagcaggagaaggtcccccaacctgggtggaggtc
cctgctgcagctgtgaaggaagcgatggccctggaaccagcagcagatacactgagctgt
cctgcccttttagaagaaccacaaagtccatcatccacccccaccctggaggactctctt
tttagcagggacctggaaagccaggcaggaacacacagacccatggaggcggttcctact
ggctctcctgtgaatgaagttcagttccctgtcagatcagtggagaacggactgtcacgt
gaccttaaggtgcccgtgacagaacacacagacccggggcagaagggcactgccactgct
gatgctccacagtggttccacccgcagatacagtggtttcagagaatgaagtccatcgtc
ataaacatcaaactccccaaccctactgaacagacatgtgaattcttctctgacagagtc
atgtacagtgccaccgttaatggtcaacagtaccgggccgacctggtgctgcagggcacc
attgaaccagacgagtgtacatgcgaggtgaagagcggtggacccgtcctgcaactgatt
aaagcacgcagtggcttgtgggaaaggctgctccgggaaaagaatgtgtttgtcagtctg
gactttgaccatattgaggacgaacctgaaaaacctgagaatggtaagatctgggatcgt
cgctga
DBGET
integrated database retrieval system
