Paramormyrops kingsleyae: 111843663
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Entry
111843663 CDS
T05788
Name
(RefSeq) collagen alpha-1(IV) chain-like isoform X1
KO
K06237
collagen type IV alpha
Organism
pki
Paramormyrops kingsleyae
Pathway
pki04382
Cornified envelope formation
pki04510
Focal adhesion
pki04512
ECM-receptor interaction
pki04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111843663
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111843663
09142 Cell motility
04820 Cytoskeleton in muscle cells
111843663
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
111843663
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pki04147
]
111843663
00536 Glycosaminoglycan binding proteins [BR:
pki00536
]
111843663
Exosome [BR:
pki04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
111843663
Glycosaminoglycan binding proteins [BR:
pki00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111843663
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
111843663
NCBI-ProteinID:
XP_023667174
LinkDB
All DBs
Position
Unknown
AA seq
1635 aa
AA seq
DB search
MFSNSALILVLVMFFTHEARAEGCSGSSCGKCDCNGIKGEKGAQGYAGMQGKMGFPGLQG
GEGAVGPRGPKGDSGHPGAPGLKGRHGSTGVPGFPGNPGLPGIPGQDGPPGVPGIPGCNG
TKGERGFDGVPAHPGPQGPPGIPGTPGMKGEAGGIIRGTIPEKGEKGFAGLPGQLGQQGF
PGIAGPIGPPGPQGSEGLPGTPGLPGEMGDKLSFLGEKGEKGLRGPRGEPGPPARIYHVQ
GSPTEYILGPKGDKGEVGDKGEKGKCPSENKGEPGSPGPRGKPGKDGENGAKGLRGLPGL
PGIDGWLGEKGDRGPPGYIDREPGPPGSPGSPGLKGEQGVPGLLGDPGPPGVIIEGPRGT
EGLPGESGEKGDKGPGGESLPGPSGKQGPSGPPGPRGPPGDEDCNIDIGAVGDQGPPGLS
GEVGQKGDKGDTCVQCEDSGSPGSPGPQGPTGEQGAPGLEGSKGPKGELGPVGPRGNPGI
DGSPGLIGAPGAHGEPGDIFVAPGLKGEKGASGADGTRGLPGPDGIPGPDGFPGIPGTKG
DSPIVGIKGDRGLDGDAGAIGLPGERGPPGIPGFGHTGEPGEKGSPGPAGRKGVAGAPGP
KGIPGYGVTSLGPQGPPGLLGEAGIPGLLGMQGHQGDHGLQGVPGQKGDHGLPGTGLPGI
PGPKGYSGIPGAPGLPGEPGPTGLGGSAGFPGEPGQKGEPGLGLTGPRGPQGSQGVPGFP
GEKGSVGHSGDPGHLGQIGPPGPQGIKGDSGPIGQHGIAGPPGPAGRGDPGPAGATGPPG
LPGPPGSTGEKGEKGYPGLPGLDIPGPAGEKGIPGFPGLLGAKGLPGKEGSVGRDGFPGF
RGHKGEMGSMGPPGQPGNLGLPGSPGALGLQGDPGPLGPKGEIGEMGPKGESGERGLQGP
PGNISATDIHQVKGVKGDPGDPGNQGDTGLQGISGQPGSPGMPGKDGEPGLPGHSGVKGD
IGLPGEQGELGLRGQKGAAGSMGMPGTTGSQGEKGITGTLGHPGMPGTPGERGQKGDTGL
PGIGVLGPQGEKGHVGETGPSGDPGHKGQKGSIGLPGMPGVPGPKGDVGLEGTQGIPGEP
GEKGVIGLPGLPGEPGLQGQPGRLGTQGTVGTQGEKGLPGEDGMPGSVGEKGNSGVPGRG
FSGSEGQPGSKGDKGSAGVPGFPGIPGIPGIKGDRGLPGNQGEPGQSGDRGPLGSPDFGP
KGETGAPGEPGEPGETGDPGLMGIPGIAGSEGERGDPGFPGPPGQVGQKGDRGLPGLLGQ
SGLPGFPGLKGELGQLGFPGFQGMKGEPGVVGFKGEAGDKGLPGEKGRVGHPGPPGQPTF
TKGETGFPGTQGPPGPRGPEGFPGIKGLQGVIGPLGMPGEDGDAGFDGTSGAKGEPGPSG
PAGPRGFPGPAGPDGFPGSMGPPGLPSMDHGFLLTRHSQTVDIPTCPGGTHFIYSGYSLL
YVQGNERSHGQDLGTAGSCMKKFSTMPFLFCNINNVCNLASRNDYSYWLTSPKPMPMSME
PITGDNIEPFISRCSVCEAPAMIMAFHSQSIMIPACPVGWESLWIGYSFVMHTSAGAEGS
GQALASPGSCLEDFRSAPFIECHGRGTCNYYANSYSFWLATIEDDDMFRKPAPTTLKAGN
LITHISRCQVCMKRT
NT seq
4908 nt
NT seq
+upstream
nt +downstream
nt
atgttctccaacagcgccttgattcttgtgctggtcatgtttttcacgcatgaagcgaga
gctgaggggtgctcaggttcatcctgtggcaagtgtgactgcaatggcatcaaaggggaa
aagggtgcacagggatatgctggtatgcagggcaagatgggctttcctggactacaagga
ggggagggtgcagtggggccaaggggcccaaagggagattctggccacccaggagcacca
ggattgaaaggaagacatggcagcactggtgtaccaggtttcccaggcaacccaggactt
ccaggtattcctggccaagacgggccacctggagttccaggaatcccagggtgcaatggg
acaaagggagaacgcggttttgatggtgtcccagcacatcctggcccacaaggtccacct
ggtatccctggcacaccaggaatgaagggtgaagctggtgggatcattagagggacaatc
ccagaaaaaggagagaaaggatttgctgggctaccaggtcagctgggacaacaaggtttt
cctggaatcgcaggaccaattggaccaccaggaccacagggatctgaaggacttccaggg
actcctggcctcccaggagagatgggtgacaagctgtcatttttaggtgaaaagggagaa
aaggggctgcgaggacccaggggggagccaggaccccccgcacgcatctatcatgtgcag
ggttctcctactgagtatatactaggacccaagggagacaaaggtgaagttggtgacaaa
ggagagaaaggaaaatgtccaagtgaaaacaaaggtgaacctggctctccaggaccaaga
ggtaaaccagggaaagatggagagaatggtgcaaaaggattgagaggcttgcctggacta
cctggaattgatggatggctgggtgaaaagggtgacaggggaccccctggatatattgat
agagaacctggccctccaggcagccctgggtccccaggtttaaaaggagaacaaggtgtc
cctggacttctgggagatcctggccctccaggggtaattattgagggtccacgaggcact
gaagggctcccaggagagtctggtgagaagggagacaagggtcctggtggggaatcgctg
ccaggaccaagcggaaaacaagggccgtcaggaccccctgggccacgtgggcctccaggt
gatgaagattgcaatattgacataggagccgtgggagatcaaggacctcctggcctgtct
ggtgaagtgggacagaaaggtgataaaggagacacctgtgtgcagtgtgaagattctggg
agtcctggatccccaggccctcagggaccaactggagagcagggtgctcctgggcttgag
ggaagtaaaggaccaaaaggtgagcttggacctgttggccctcgtgggaatccgggtatc
gatggctctccaggactgataggtgctccaggggctcatggtgagccaggagatatcttc
gtagcaccagggctaaagggcgagaagggagcctcaggtgctgatggcaccagaggactg
ccaggtccagatggaatccctggaccagacgggtttcctggcattcctggaaccaaagga
gactcaccaattgtgggtattaagggagatcgaggtttagatggagatgctggtgcaatt
ggacttccaggagaaaggggtcctcctggtattcctggctttggacatactggggagcct
ggtgagaagggcagtccagggccggcaggccgtaaaggagtagcaggtgctccaggacct
aaaggtatacctggatatggcgtcacttcacttggacctcagggcccacctgggctgctg
ggagaggcaggaatccctggactgcttggtatgcaaggacatcagggtgaccatggactg
caaggtgtcccagggcagaagggtgatcacggcttacctgggactgggttgcctggaatt
ccagggcctaaaggatactcaggaataccaggggctccaggtctgccaggagagccagga
cctacaggattgggcggttcagctgggtttcctggtgaaccagggcaaaagggtgaacca
gggctgggcctgacagggcccaggggtccgcaagggtctcagggagtcccaggatttccc
ggagaaaaaggcagtgttgggcattccggagatccaggacatttaggccaaatagggcca
cctggacctcaagggattaaaggtgactctggtcccattggtcagcacggaattgcaggt
ccacctggccctgctgggagaggtgaccctgggcctgctggagctactggccctcctggt
ttacctggacctcctggtagcactggcgagaagggggagaagggctatcctggtttgcct
ggtttagacatacctgggcctgcaggagagaagggcattccgggttttccaggactcctg
ggggctaaaggacttccgggcaaagaaggttctgtgggaagagacggctttcctggattc
cgagggcataaaggagaaatgggatcaatggggccccctggtcagccagggaatctgggt
ctcccgggaagtccaggagctctaggacttcaaggtgaccctggacctcttgggccaaaa
ggggaaattggcgagatgggacccaaaggagaaagtggagaacgaggtctccaggggcct
ccggggaacataagtgcgacggacattcatcaagtcaagggtgtgaagggtgacccaggg
gacccaggtaaccaaggagatacagggttgcagggaatctcaggtcagcctggaagtcct
ggcatgcctggaaaggatggagagccgggtttgcctgggcattcgggtgtgaaaggtgac
attggcttacctggagaacagggggaacttggcttacgtggacaaaaaggcgctgctgga
agtatgggcatgccaggtacaactggttcccaaggggaaaaaggaatcacaggaacactt
gggcatccaggaatgcctggaacacctggggagagaggacaaaagggtgacacaggtctg
ccaggaattggggtgctgggaccccaaggagaaaaggggcatgtgggcgaaactggtcca
tctggggacccaggacacaagggccaaaagggcagcatcggcttaccaggaatgcctgga
gtaccaggacccaagggagatgtagggttagagggcacgcaaggtattccgggagagcca
ggggagaagggagtgattggattaccgggcttacctggagagccaggattacaggggcag
ccaggtaggctgggtacacagggcacggtagggacacaaggggagaagggtctgcctggg
gaggacggcatgccagggtctgtgggcgaaaaggggaactcaggtgtacctggcagaggg
ttttctggttctgaagggcaacctggaagcaaaggtgacaaaggcagtgcaggtgtacct
ggtttccctggcatacctggtatcccagggatcaagggggatagaggcctgcctggaaac
cagggtgaaccgggacaatcaggtgatcgaggtcctctaggatcccctgatttcgggccc
aagggtgaaacgggagccccaggagagccaggagagccaggtgaaactggagatccaggc
ctaatgggaattccaggaattgccggatccgaaggagaaaggggggatccaggctttcca
gggcctcctggacaggttgggcaaaagggggacagaggtctacctggattactggggcaa
tctggcctgcctgggtttcccggactgaagggggaattgggacagctgggtttccctgga
tttcaaggaatgaaaggtgaacctggtgtggtgggattcaaaggagaagcaggagacaag
ggtttacctggcgagaaaggtagagttggccaccctggacctcctggtcaaccaactttt
accaaaggagagactggctttccagggactcaaggaccaccaggtccgagaggacctgaa
ggatttcctggtattaaaggcctgcaaggtgtgattggaccattgggcatgccaggagaa
gatggagatgctgggtttgatggcacatctggagcaaagggcgaacctggtccaagtgga
cctgcaggccccagagggttccctggtcccgcagggcctgatggctttcctggctcgatg
gggcccccaggacttccctccatggatcatggcttcttattgacacgacacagccaaaca
gtggacattcccacttgtccagggggcacccatttcatatacagtggctattctctctta
tatgtccagggcaacgagcgttcacatggacaagacctaggaactgcagggagttgcatg
aagaagttcagcactatgcctttcctattttgtaacatcaacaatgtctgcaacttagca
tcaaggaacgattactcctactggctgacttcaccaaagccgatgcccatgagcatggag
cccatcaccggggacaacatcgagcctttcattagccgttgctctgtgtgtgaagcccct
gccatgattatggcattccatagccagtccatcatgataccagcctgtccggtggggtgg
gaatccctctggattggctactcattcgtaatgcacaccagtgcaggggcagaaggttct
gggcaggccttggcctccccaggatcttgtctggaagacttccgcagtgcccccttcatc
gagtgccatggtcgtggcacctgcaactattacgccaactcctacagtttctggctggct
actattgaggacgacgacatgtttaggaaacctgccccgacgacccttaaagcaggaaat
ctcatcacccacattagcagatgccaggtttgcatgaagaggacataa
DBGET
integrated database retrieval system
