Paramormyrops kingsleyae: 111843663
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Entry
111843663 CDS
T05788
Name
(RefSeq) collagen alpha-1(IV) chain-like isoform X1
KO
K06237
collagen type IV alpha
Organism
pki
Paramormyrops kingsleyae
Pathway
pki04510
Focal adhesion
pki04512
ECM-receptor interaction
pki04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111843663
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111843663
09142 Cell motility
04820 Cytoskeleton in muscle cells
111843663
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pki04147
]
111843663
00536 Glycosaminoglycan binding proteins [BR:
pki00536
]
111843663
Exosome [BR:
pki04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
111843663
Glycosaminoglycan binding proteins [BR:
pki00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111843663
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
111843663
NCBI-ProteinID:
XP_023667174
LinkDB
All DBs
Position
Unknown
AA seq
1635 aa
AA seq
DB search
MFSNSALILVLVMFFTHEARAEGCSGSSCGKCDCNGIKGEKGAQGYAGMQGKMGFPGLQG
GEGAVGPRGPKGDSGHPGAPGLKGRHGSTGVPGFPGNPGLPGIPGQDGPPGVPGIPGCNG
TKGERGFDGVPAHPGPQGPPGIPGTPGMKGEAGGIIRGTIPEKGEKGFAGLPGQLGQQGF
PGIAGPIGPPGPQGSEGLPGTPGLPGEMGDKLSFLGEKGEKGLRGPRGEPGPPARIYHVQ
GSPTEYILGPKGDKGEVGDKGEKGKCPSENKGEPGSPGPRGKPGKDGENGAKGLRGLPGL
PGIDGWLGEKGDRGPPGYIDREPGPPGSPGSPGLKGEQGVPGLLGDPGPPGVIIEGPRGT
EGLPGESGEKGDKGPGGESLPGPSGKQGPSGPPGPRGPPGDEDCNIDIGAVGDQGPPGLS
GEVGQKGDKGDTCVQCEDSGSPGSPGPQGPTGEQGAPGLEGSKGPKGELGPVGPRGNPGI
DGSPGLIGAPGAHGEPGDIFVAPGLKGEKGASGADGTRGLPGPDGIPGPDGFPGIPGTKG
DSPIVGIKGDRGLDGDAGAIGLPGERGPPGIPGFGHTGEPGEKGSPGPAGRKGVAGAPGP
KGIPGYGVTSLGPQGPPGLLGEAGIPGLLGMQGHQGDHGLQGVPGQKGDHGLPGTGLPGI
PGPKGYSGIPGAPGLPGEPGPTGLGGSAGFPGEPGQKGEPGLGLTGPRGPQGSQGVPGFP
GEKGSVGHSGDPGHLGQIGPPGPQGIKGDSGPIGQHGIAGPPGPAGRGDPGPAGATGPPG
LPGPPGSTGEKGEKGYPGLPGLDIPGPAGEKGIPGFPGLLGAKGLPGKEGSVGRDGFPGF
RGHKGEMGSMGPPGQPGNLGLPGSPGALGLQGDPGPLGPKGEIGEMGPKGESGERGLQGP
PGNISATDIHQVKGVKGDPGDPGNQGDTGLQGISGQPGSPGMPGKDGEPGLPGHSGVKGD
IGLPGEQGELGLRGQKGAAGSMGMPGTTGSQGEKGITGTLGHPGMPGTPGERGQKGDTGL
PGIGVLGPQGEKGHVGETGPSGDPGHKGQKGSIGLPGMPGVPGPKGDVGLEGTQGIPGEP
GEKGVIGLPGLPGEPGLQGQPGRLGTQGTVGTQGEKGLPGEDGMPGSVGEKGNSGVPGRG
FSGSEGQPGSKGDKGSAGVPGFPGIPGIPGIKGDRGLPGNQGEPGQSGDRGPLGSPDFGP
KGETGAPGEPGEPGETGDPGLMGIPGIAGSEGERGDPGFPGPPGQVGQKGDRGLPGLLGQ
SGLPGFPGLKGELGQLGFPGFQGMKGEPGVVGFKGEAGDKGLPGEKGRVGHPGPPGQPTF
TKGETGFPGTQGPPGPRGPEGFPGIKGLQGVIGPLGMPGEDGDAGFDGTSGAKGEPGPSG
PAGPRGFPGPAGPDGFPGSMGPPGLPSMDHGFLLTRHSQTVDIPTCPGGTHFIYSGYSLL
YVQGNERSHGQDLGTAGSCMKKFSTMPFLFCNINNVCNLASRNDYSYWLTSPKPMPMSME
PITGDNIEPFISRCSVCEAPAMIMAFHSQSIMIPACPVGWESLWIGYSFVMHTSAGAEGS
GQALASPGSCLEDFRSAPFIECHGRGTCNYYANSYSFWLATIEDDDMFRKPAPTTLKAGN
LITHISRCQVCMKRT
NT seq
4908 nt
NT seq
+upstream
nt +downstream
nt
atgttctccaacagcgccttgattcttgtgctggtcatgtttttcacgcatgaagcgaga
gctgaggggtgctcaggttcatcctgtggcaagtgtgactgcaatggcatcaaaggggaa
aagggtgcacagggatatgctggtatgcagggcaagatgggctttcctggactacaagga
ggggagggtgcagtggggccaaggggcccaaagggagattctggccacccaggagcacca
ggattgaaaggaagacatggcagcactggtgtaccaggtttcccaggcaacccaggactt
ccaggtattcctggccaagacgggccacctggagttccaggaatcccagggtgcaatggg
acaaagggagaacgcggttttgatggtgtcccagcacatcctggcccacaaggtccacct
ggtatccctggcacaccaggaatgaagggtgaagctggtgggatcattagagggacaatc
ccagaaaaaggagagaaaggatttgctgggctaccaggtcagctgggacaacaaggtttt
cctggaatcgcaggaccaattggaccaccaggaccacagggatctgaaggacttccaggg
actcctggcctcccaggagagatgggtgacaagctgtcatttttaggtgaaaagggagaa
aaggggctgcgaggacccaggggggagccaggaccccccgcacgcatctatcatgtgcag
ggttctcctactgagtatatactaggacccaagggagacaaaggtgaagttggtgacaaa
ggagagaaaggaaaatgtccaagtgaaaacaaaggtgaacctggctctccaggaccaaga
ggtaaaccagggaaagatggagagaatggtgcaaaaggattgagaggcttgcctggacta
cctggaattgatggatggctgggtgaaaagggtgacaggggaccccctggatatattgat
agagaacctggccctccaggcagccctgggtccccaggtttaaaaggagaacaaggtgtc
cctggacttctgggagatcctggccctccaggggtaattattgagggtccacgaggcact
gaagggctcccaggagagtctggtgagaagggagacaagggtcctggtggggaatcgctg
ccaggaccaagcggaaaacaagggccgtcaggaccccctgggccacgtgggcctccaggt
gatgaagattgcaatattgacataggagccgtgggagatcaaggacctcctggcctgtct
ggtgaagtgggacagaaaggtgataaaggagacacctgtgtgcagtgtgaagattctggg
agtcctggatccccaggccctcagggaccaactggagagcagggtgctcctgggcttgag
ggaagtaaaggaccaaaaggtgagcttggacctgttggccctcgtgggaatccgggtatc
gatggctctccaggactgataggtgctccaggggctcatggtgagccaggagatatcttc
gtagcaccagggctaaagggcgagaagggagcctcaggtgctgatggcaccagaggactg
ccaggtccagatggaatccctggaccagacgggtttcctggcattcctggaaccaaagga
gactcaccaattgtgggtattaagggagatcgaggtttagatggagatgctggtgcaatt
ggacttccaggagaaaggggtcctcctggtattcctggctttggacatactggggagcct
ggtgagaagggcagtccagggccggcaggccgtaaaggagtagcaggtgctccaggacct
aaaggtatacctggatatggcgtcacttcacttggacctcagggcccacctgggctgctg
ggagaggcaggaatccctggactgcttggtatgcaaggacatcagggtgaccatggactg
caaggtgtcccagggcagaagggtgatcacggcttacctgggactgggttgcctggaatt
ccagggcctaaaggatactcaggaataccaggggctccaggtctgccaggagagccagga
cctacaggattgggcggttcagctgggtttcctggtgaaccagggcaaaagggtgaacca
gggctgggcctgacagggcccaggggtccgcaagggtctcagggagtcccaggatttccc
ggagaaaaaggcagtgttgggcattccggagatccaggacatttaggccaaatagggcca
cctggacctcaagggattaaaggtgactctggtcccattggtcagcacggaattgcaggt
ccacctggccctgctgggagaggtgaccctgggcctgctggagctactggccctcctggt
ttacctggacctcctggtagcactggcgagaagggggagaagggctatcctggtttgcct
ggtttagacatacctgggcctgcaggagagaagggcattccgggttttccaggactcctg
ggggctaaaggacttccgggcaaagaaggttctgtgggaagagacggctttcctggattc
cgagggcataaaggagaaatgggatcaatggggccccctggtcagccagggaatctgggt
ctcccgggaagtccaggagctctaggacttcaaggtgaccctggacctcttgggccaaaa
ggggaaattggcgagatgggacccaaaggagaaagtggagaacgaggtctccaggggcct
ccggggaacataagtgcgacggacattcatcaagtcaagggtgtgaagggtgacccaggg
gacccaggtaaccaaggagatacagggttgcagggaatctcaggtcagcctggaagtcct
ggcatgcctggaaaggatggagagccgggtttgcctgggcattcgggtgtgaaaggtgac
attggcttacctggagaacagggggaacttggcttacgtggacaaaaaggcgctgctgga
agtatgggcatgccaggtacaactggttcccaaggggaaaaaggaatcacaggaacactt
gggcatccaggaatgcctggaacacctggggagagaggacaaaagggtgacacaggtctg
ccaggaattggggtgctgggaccccaaggagaaaaggggcatgtgggcgaaactggtcca
tctggggacccaggacacaagggccaaaagggcagcatcggcttaccaggaatgcctgga
gtaccaggacccaagggagatgtagggttagagggcacgcaaggtattccgggagagcca
ggggagaagggagtgattggattaccgggcttacctggagagccaggattacaggggcag
ccaggtaggctgggtacacagggcacggtagggacacaaggggagaagggtctgcctggg
gaggacggcatgccagggtctgtgggcgaaaaggggaactcaggtgtacctggcagaggg
ttttctggttctgaagggcaacctggaagcaaaggtgacaaaggcagtgcaggtgtacct
ggtttccctggcatacctggtatcccagggatcaagggggatagaggcctgcctggaaac
cagggtgaaccgggacaatcaggtgatcgaggtcctctaggatcccctgatttcgggccc
aagggtgaaacgggagccccaggagagccaggagagccaggtgaaactggagatccaggc
ctaatgggaattccaggaattgccggatccgaaggagaaaggggggatccaggctttcca
gggcctcctggacaggttgggcaaaagggggacagaggtctacctggattactggggcaa
tctggcctgcctgggtttcccggactgaagggggaattgggacagctgggtttccctgga
tttcaaggaatgaaaggtgaacctggtgtggtgggattcaaaggagaagcaggagacaag
ggtttacctggcgagaaaggtagagttggccaccctggacctcctggtcaaccaactttt
accaaaggagagactggctttccagggactcaaggaccaccaggtccgagaggacctgaa
ggatttcctggtattaaaggcctgcaaggtgtgattggaccattgggcatgccaggagaa
gatggagatgctgggtttgatggcacatctggagcaaagggcgaacctggtccaagtgga
cctgcaggccccagagggttccctggtcccgcagggcctgatggctttcctggctcgatg
gggcccccaggacttccctccatggatcatggcttcttattgacacgacacagccaaaca
gtggacattcccacttgtccagggggcacccatttcatatacagtggctattctctctta
tatgtccagggcaacgagcgttcacatggacaagacctaggaactgcagggagttgcatg
aagaagttcagcactatgcctttcctattttgtaacatcaacaatgtctgcaacttagca
tcaaggaacgattactcctactggctgacttcaccaaagccgatgcccatgagcatggag
cccatcaccggggacaacatcgagcctttcattagccgttgctctgtgtgtgaagcccct
gccatgattatggcattccatagccagtccatcatgataccagcctgtccggtggggtgg
gaatccctctggattggctactcattcgtaatgcacaccagtgcaggggcagaaggttct
gggcaggccttggcctccccaggatcttgtctggaagacttccgcagtgcccccttcatc
gagtgccatggtcgtggcacctgcaactattacgccaactcctacagtttctggctggct
actattgaggacgacgacatgtttaggaaacctgccccgacgacccttaaagcaggaaat
ctcatcacccacattagcagatgccaggtttgcatgaagaggacataa
DBGET
integrated database retrieval system
