Paramormyrops kingsleyae: 111845568
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Entry
111845568 CDS
T05788
Symbol
palb2
Name
(RefSeq) partner and localizer of BRCA2 isoform X1
KO
K10897
partner and localizer of BRCA2
Organism
pki
Paramormyrops kingsleyae
Pathway
pki03440
Homologous recombination
pki03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pki00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111845568 (palb2)
03460 Fanconi anemia pathway
111845568 (palb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pki03400
]
111845568 (palb2)
DNA repair and recombination proteins [BR:
pki03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
111845568 (palb2)
FA (Fanconi anemia) pathway
Downstream FA components
111845568 (palb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
111845568
NCBI-ProteinID:
XP_023670841
Ensembl:
ENSPKIG00000013032
LinkDB
All DBs
Position
Unknown
AA seq
1441 aa
AA seq
DB search
MTVLFVNNFIPPCDRPRDTPHPEFRSTRTLPQLWDRMHNIQASMEDSVNTLLHGDDTEML
REKLALLRREYNRTVQRLRRAERSELVRKHVRSRIAEQNRSEVEQSTVTSSDLSVSKVET
LASVTPSDSDVYCRGMAVRFSLPPETYSLCTRPGDLPGSAPLSDNHAVDQAGSPTSGRGH
RRHSAHRLRSRRSWLRWEQKERSDSQRSESGESSTGQGDGEKMDSLLVPVLAEDCQPEVL
SCSKEAGFQGPSAQEKCRGREEGLDKPFDRSVSTQGSLKDNNSVEKCESLADSLLGETML
SETPEIDFSTTKPLSVPSPSRPSDGNPTSDEAGEQRGSSPPPPASDSGEVGCLDSCTMIE
GLLFPVEYYVRTTRRMASAQSHVDLGAVIQSQLSHGRKGRGRRRRPAGGVTRDSQTSEVT
LQPQALGAEGEDESQVPPEPKSCQNHDTDCAVSRRYAGRRQKGGGAGRGRGRAARKHFSP
PTKVGTTGPDIAADLISHTGNDVQTAEKELYAIFRTNGRAKMSGFNIGEDSLQRGQTGTD
LCDSLLLQPPGPVQQPLRPTVPPSGGGNFNLRALLSRFDVKDFHLPDDEFGRLKLDKLRS
SATASLDASLPRQSPYNTRRGASRTPLGADRHKSAGSSGGPVGSLAGTNCQQHIQVLPND
APPQLPKELRSRNSTAQQTATATMRSFRVRLPGGKQGRNNFSEDGEDGRVPSPESRSSQL
NPVVRNSPGSSLGVRMGEGDRGGVANCMEVEGGVEASPAGMALSPCVLNFSSSTPAHNEK
SERPVLPLLGSPTFPSLGVTPAFSAHSSLPSQNCSASTPLKVQSPVARQATPSTSRDSQR
HRAASSGGTPPSLLCQSPEELIQSRNPLPAEVVQQKVHAIEVSANQSYSPKTLLPCFSDS
LSSSILASITSQCRQSAPSPSLDRSDIDSSPPFGAGEDPYTPTPQTTLKDGSAPMKGHVG
KSPLAETPSGVDLAPSLSPGSSQKGDNVESLNPSGAVLLSPSQDCPEAGEGEAPCLVNAD
GSMGGASRDSHSDVEPLLQAASVDKCSLGEQSLSPGTEAADQDLDSYFTDSVWPPWGQAS
SSQGPLGRQAETQGMAPPTERRSPAADILQLMHTLKAPAGRCLVDVWGVRMEMGWSVVTA
EEWAVSLWQQTSPEQWCLLHTWPFTEHPVIALLPVPDAPGLVCAALGQLEIREARILSFV
NAGGPFSQSVLCTGEIQAVLGVSEGRLVCCASSGSTQTVTVAQLTKDGRPQKSLSLVSPG
QGVHALAPVEGEPDALIGSTDAGHLLLWNMRTGNLLQSFALGECLLGATCLRGYSEGGVL
FMLLQHKFLSQEDGVLFSLIATNPITARYVLAHSLIQPALCLGRFTDVDVCGSSLAVAFQ
CGTLATWDLRQWDLLARLARAPEEGCNVVRWAGPSSLLIGNLSGDVSLYQYTGGHCAAKP
E
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
atgacagtgctatttgttaataattttataccgccctgcgacagacccagggacactcca
caccctgagttccgctccacacgaacacttccgcagctgtgggatcgtatgcataatatt
caagcgagcatggaggacagcgtgaacacgttgttacacggcgatgacacagaaatgtta
agggaaaaattggctttactacggagagagtacaaccgaactgttcagagattacggcgt
gctgagcgctctgagcttgtgcggaaacacgtgaggagcaggattgcagaacagaatcgt
tcagaagtggaacagagtactgttacttcatctgacctaagtgtttccaaggtggaaacc
cttgcttctgttactccgagtgactctgatgtctactgcaggggtatggctgtccggttc
agtctgccacctgaaacctacagcctgtgcacccgccctggggaccttcctggttctgct
cccctctctgacaaccacgcggtcgaccaggcaggaagcccaacatctggccgcggccac
cgccgccattcggcccaccggctgcggtcacggcggagttggctgcgctgggagcagaag
gagcgctcagactctcagaggagtgagagtggggagagttccaccggccagggggatggt
gagaagatggattctctcttggtccctgtccttgctgaggactgtcagcctgaggtcctg
tcctgcagcaaggaggcaggctttcagggtcctagtgcccaggagaaatgcagaggaagg
gaagaaggactcgataaaccattcgataggtctgtctccacccaggggagtctgaaagac
aacaacagtgtggagaagtgtgagtccttagcagactccctgctgggggaaaccatgctt
tctgaaacaccagagattgattttagcaccactaaacccctgtccgtgccatccccctcg
aggccatcagatggcaatccaacgtcggacgaggccggtgagcagcgaggctcaagcccc
ccacccccggcatccgattctggggaagtgggttgcctggactcctgcaccatgatcgaa
gggctgcttttcccggtggagtactacgtgaggaccacgcggaggatggcgtctgcccag
agccacgtagacctgggcgccgtgattcagagccagctgagccacggcaggaagggcaga
ggacgccgacgccggccggccgggggtgtgacccgtgacagccaaacatctgaggtcact
ttgcagccccaagcactgggtgctgaaggcgaggacgagagccaggttcctccggaacca
aagagctgccagaaccatgatactgactgtgccgtctccagacggtatgcaggtcggcgc
cagaaagggggcggggcagggaggggccggggcagggccgccagaaagcactttagcccg
ccgactaaagtgggaacaacagggcctgacatagcagcagatttaatatctcacacagga
aacgatgttcagaccgctgagaaggagctgtacgctatctttcggacaaatggcagagca
aaaatgtcagggtttaatattggtgaggacagtttgcagaggggacagacaggtacagat
ctatgcgactcgctgctgctccagcctcctggtcctgtgcagcaacccctgcgtcccaca
gtgcccccgtctggtggaggtaacttcaacctgcgtgccctcctctcccgcttcgacgtc
aaagactttcaccttcccgatgatgagtttgggaggctcaagctggacaagcttcgatcg
tcagccacagcgagcttagacgccagcctgcctcgtcagtccccctataacactcgtcga
ggggcatcccggacccctttaggggctgaccgtcacaagtcagctggaagctctggaggg
ccggttggcagccttgctgggacgaattgccagcagcacattcaggtcctgcccaatgat
gcccccccccagctccctaaggaactgaggtcaaggaatagtacagcccaacagactgcg
actgcaaccatgaggagcttcagggtcaggcttccaggtggaaaacagggcaggaacaac
ttctctgaagacggagaagatggcagagtaccttcaccggagtctaggtcaagtcagctt
aatcctgtggttaggaacagcccaggttcctccctgggtgtcaggatgggggagggagac
agagggggtgtcgcaaattgcatggaagtggaagggggtgtggaagcgagtcctgctggg
atggctctgtctccctgtgtgctaaacttcagctcttctactcctgcacacaatgagaaa
agtgagaggcccgttctgcccttgttgggaagccctacattcccctccctgggggtcacg
cccgccttctccgcacactccagcctgccttcacagaactgctcggcctcgactcccctg
aaagtgcagagtcccgtcgcccggcaggccacaccctccacgtcacgtgactcgcagagg
cacagggcagcctctagtggaggcacaccgccgtctctgctttgccaatccccagaggag
ctaatccagtcccggaacccccttcctgctgaggtggtacagcagaaggttcatgcgatt
gaggtgtcggcgaatcagagttattcacccaaaacacttctgccttgcttctctgactct
ctttcctcctccatccttgccagtattacttctcagtgccgccagtctgctcccagtccc
tccttggaccgcagtgacatagattcctcaccccccttcggcgccggagaggacccatat
acccccacaccccaaaccaccctcaaagatggatctgcccccatgaaagggcatgtgggc
aaaagtcctctagctgagacaccttcaggggtggatctggcaccttctctgtctccaggt
tcctcccagaagggggacaacgtcgaatctttaaatcccagtggggcggtcctgctgtct
ccatcccaggactgtccggaggctggagagggcgaggctccctgccttgtgaatgcggat
ggcagtatgggcggagcaagtagggattcacacagcgatgtggagcctctgcttcaggct
gccagcgtggataaatgctcactgggagagcagtcactgtctccaggaacggaagctgca
gaccaagacctggacagctacttcaccgactctgtctggccgccctgggggcaggcgtct
tcgtcccaggggcctttgggaaggcaggccgaaacacaaggcatggcgccccctacagag
cggaggtcacctgctgctgatatcctgcaacttatgcacactctgaaggctcccgcaggc
cgctgcctggtggacgtatggggtgtccgcatggagatgggctggagtgtggtgacagca
gaggagtgggccgtgtccttgtggcagcaaacctctcctgaacagtggtgtctgctccac
acctggcctttcactgagcacccagtcattgccctgcttcctgtgccagatgccccgggc
cttgtttgtgctgctctcggtcaactggagatcagagaggccaggatcctttccttcgtc
aatgctggaggcccgttctcccagtcggtgctgtgcactggggagatccaggcagtgctg
ggggtgtctgagggcagactggtctgctgcgcctcctctgggtcgactcagacggtgact
gtggcccagctgacgaaggacggcaggccgcagaagtcgctctcactggtgtctcctggg
cagggtgtccacgctctggcccctgtggaaggagagccggacgctctaattggctccaca
gacgccggccatctgctcctctggaatatgaggactggtaacctgctgcagagttttgcc
ctgggggagtgtcttctaggagccacgtgtctaagaggatactcagagggtggtgtcctg
ttcatgttgctccagcataagtttctcagtcaggaagatggcgtgctcttctctctgatc
gccacaaaccccatcacggctcgatacgtcttggcccacagcctgatccagcctgcgctg
tgcttagggaggttcacggatgtggacgtgtgtggatcgtcactggcggtggcattccag
tgtgggacgttggctacatgggatctccgccagtgggacttgctggccaggctggcccgt
gccccagaggaaggctgtaatgttgttcgctgggcaggtcccagctccctgctgatagga
aacctcagtggagatgtgtccctataccagtatacaggagggcactgtgctgctaaacca
gagtaa
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