Paramormyrops kingsleyae: 111846315
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Entry
111846315 CDS
T05788
Name
(RefSeq) collagen alpha-5(IV) chain-like isoform X1
KO
K06237
collagen type IV alpha
Organism
pki
Paramormyrops kingsleyae
Pathway
pki04382
Cornified envelope formation
pki04510
Focal adhesion
pki04512
ECM-receptor interaction
pki04518
Integrin signaling
pki04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111846315
04518 Integrin signaling
111846315
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111846315
09142 Cell motility
04820 Cytoskeleton in muscle cells
111846315
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
111846315
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pki04147
]
111846315
00536 Glycosaminoglycan binding proteins [BR:
pki00536
]
111846315
Exosome [BR:
pki04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
111846315
Glycosaminoglycan binding proteins [BR:
pki00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111846315
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
111846315
NCBI-ProteinID:
XP_023672145
LinkDB
All DBs
Position
Unknown
AA seq
1690 aa
AA seq
DB search
MKNKNLKSLDNLAASLVFIILCFEIRNLESAACHGCVANTKCDCSGVKGTKGDRGFPGLP
GLQGLPGLPGPEGPFGPRGEKGDDGSTGLSGPKGIRGPLGLPGFPGTPGIPGLPGQDGAP
GPRGVPGCNGTKGERGFSGPPGFPGDPGPKGYHGPPGDKGDTGDIITVNHLGPKGDRGLP
GAPGLTGNPGHPGLPGPLGAPGPRGSDGFPGPPGPPGPKGNMGLNFQGPKGEKGDTGLRG
PPGPPGQIGEVTKPADSEVQKGEKGDHGPPGPPGDPGFPGLPGPARGQKGEKGEPGDSGK
RGKPGKDGEPGPTGFPGLKGEPGDPGPSGQHGPRGEKGEHGTPGPPGIVINGKGVSGLGP
KGNPGVPGFPGHKGDQGRQGPIGPPGQPGEPGIGYPGLPGQPGFPGPRGEKGDEGDPGFS
LPGLPGRPGQPGPQGQQGPPGRPGEAFNGGQCIEGPAGLPGNQGPQGFPGDVGQKGEKGE
TCHNCISEGIPVIGPPGPPGPPGFPGPPGFTGPQGEPGFPGLSGQTGPPGSQGPMGNSGI
PGQKGEPGEVNFLNGMKGNKGDPGFPGLPGLPGSDGKPGHAGVPGPPGPKGQPGSAHIKG
DQGPPGLPGISGSPGDPGPAGPPGIGLQGPPGLKGAQGVSGQSGSPGAPGPKGEPGKTVA
IKGGTGPRGETGDTGPPGPPGPLGQPGNPGFSGLPGPKGDPGPPGIGLPGLPGDKGFPGQ
PGLPGSPAVPGRPGLDGPPGPRGNPGPKGESGVGIPGPQGPPGFPGSKGTPGPKGDLGFP
GIPGSPGLPGLDGLPGPKGDPGHTGQPGFPGPPGTPGYGEPGPPGSPGPPGLMGPPGGPG
LQGDKGDRGLRGISLPGPAGDRGSPGSPGFPGTPGPSGPPGPVGRDGQPGSPGQKGEMGP
MGTPGYQGQPGIPGSSGPLGPKGDDGLPGLPGVEGFQGAKGNKGEPGLPGPPGPDIPPAS
LKGIKGDRGQPGANGLPGQKGVSGLPGDPGPPGRDGLSGLPGGPGPKGDQGFPGQPGPPG
LTGAKGNMGDMGLPGSPGQKGDLGQPGRHGQPGQPGNSGLPGTKGEPGLPVFGSPGNPGP
KGEPGRPGLSGNHGPKGQPGIPGLQGLPGTQGPKGDPGPSGFQGPPGIPGPKGLPGRNGQ
QGIPGPPGQPGPIGFPGPQGSLGEKGQAGRDGIPGPAGEKGEPGEPGFGTPGQPGLPGLP
GPKGDPGLPGPAGPPGIRGQKGDPGNPGPPGLLGSPGPPGPPGHPLHGTPGNPGVPGPPG
QRGPTGPPGYPGPEGPPGPPGGGGIKGEKGPPGFNGPPGRDGEKGKPGPSGNPGSTGIPG
PSGLKGDLGSSGERGLPGPKGAPGRPGFPGLNGELGDPGPPGPPGSPAYGTPPPIIKGAQ
GPPGTPGYPGISGPPGQPGRPGPQGPPGNIGDPGLDGPSGFTGPPGRKGDSGPVGKYGSR
GAPGPPGSDGPQGPPGAPGSSSAALGFLITRHSQTTDVPLCPDGTSLIYNGYSLLYVQGN
ERAHGQDLGTSGSCLARFSTMPYMFCDINNVCNFASRNDYSYWLSTPQPMPMSMAPITGK
DIKPFISRCSVCEAPAMVIAVHSQTIRVPRCPDTWDLLWIGYSFMMHTSAGAEGSGQALA
SPGSCLEEFRTAPFLECHGRGTCNYYANSYSFWLATVDASEMFRKPQPETLKAGNLLTRV
SRCVVCMKRT
NT seq
5073 nt
NT seq
+upstream
nt +downstream
nt
atgaagaataaaaacttgaagagtctggataatctcgccgcgagtctggtattcataatc
ctatgcttcgaaattcggaatttagagtcagcggcttgccatggctgtgtagcgaatacc
aaatgtgactgcagcggggtgaagggaaccaagggggacagaggctttccaggacttcca
ggcctgcaagggctaccaggcttaccgggacctgagggtccatttggaccaaggggggaa
aagggtgacgatgggtccacaggattatccggccccaaaggaattagaggcccgctgggg
ctgcccggatttcctggaacccctggaatcccaggtcttccaggacaagatggggcccca
ggtccaagaggggtcccagggtgtaacgggacaaagggtgaacgtggattttcaggaccc
cctggatttcctggggacccaggacccaagggttatcacggtcctccaggggacaaggga
gacactggtgacatcatcacagtcaatcatttaggaccgaagggagatcgaggactacct
ggcgccccgggtctaactggaaacccaggacatccaggattacctggtccacttggagca
cctggccccagaggctcagatgggttccctggacctcctggacccccaggacccaagggt
aatatgggcttgaacttccaagggcctaagggggagaagggggacacgggtctacgcgga
ccaccaggtcctccgggtcagatcggtgaggtgacgaaaccagcagactcagaggtgcag
aaaggagagaagggagaccatggaccaccagggccacctggagatcctggattcccagga
ctaccaggtccagcaagaggacagaagggtgagaagggagaacccggagattccggcaag
aggggcaaaccaggcaaagatggggaaccaggaccgactggcttcccgggtctgaaagga
gaaccaggtgatccaggtccttcagggcaacatggtccaaggggtgaaaagggtgaacat
ggaaccccaggacctcccggaatagtgattaatggaaaaggcgtttcgggactcgggcca
aaaggtaatccaggtgtcccaggatttccaggacataaaggagaccagggccgtcaaggt
ccaattggacctcctggacaaccaggggagccaggtatcgggtatccagggctgcctggc
cagcctggttttcctggaccgcggggagagaaaggtgacgaaggtgatccaggcttctcg
ctgccaggtctccctggcaggcctggacaaccaggtccccaaggtcaacagggaccccca
gggcgcccaggagaggcattcaatggtggacaatgcattgaagggcctgcagggctgcct
gggaatcagggtccacaaggcttcccgggagacgtcggccagaaaggtgaaaaaggggag
acatgtcacaactgcatttctgaaggaatcccagtaataggccccccagggccacctggt
cctccaggatttccaggtccgccaggcttcactggtccccaaggtgaaccagggtttcca
ggattatctggacagacaggaccaccaggttcacaaggcccgatgggtaattcggggatc
ccagggcagaaaggggagccaggagaagtcaactttcttaatgggatgaaggggaacaaa
ggtgaccctggcttccctggtctacctgggttacccggcagtgatggtaaacctggccat
gctggggtccctggcccacctggaccaaagggacagcctgggtctgcacacattaaaggt
gaccagggcccacctggactgcctggaatttcaggttccccaggagatcctgggcctgca
ggaccaccaggaattggactacaaggtccgcctggtctaaaaggtgctcaaggtgtatct
ggccaatcagggagccctggtgctccaggcccgaaaggtgaacccggaaaaactgtggca
ataaagggaggtacaggtcccaggggtgaaactggagatactggtcctcccgggccccca
ggcccactgggtcagcctgggaatcctggattctcaggattgcccgggccgaaaggagac
cctggacctccaggaattgggctgcctggccttccaggagataaaggattccccggtcaa
cctggacttcccggttcacctgcggttccaggacgccctggtctggatggccctcctggt
ccacggggcaatcctgggcccaagggagagtcaggagtcggtataccaggtccccaaggg
ccgccgggattcccaggcagtaaggggacccctgggcccaagggtgaccttggattccca
gggatccctgggtcacctggacttccaggtttagatggccttccaggacccaaaggtgac
ccaggtcatactggacaaccaggatttccaggacccccagggacccctggatatggagaa
ccggggcccccaggttcccctgggcctccaggacttatgggccctcctggtggccctggt
ctacaaggtgataagggcgaccgtggtctccgtggaataagcctcccaggaccagcagga
gatagaggcagccctggatcacctggctttcctggaacacctggtccctctggtcctcct
gggccagtaggccgtgacggtcaacctgggtcacctggccaaaagggtgagatgggtccc
atgggcacccctgggtaccagggccaaccaggtatccccggttcctcaggaccccttggg
ccaaaaggtgatgacggtttacctggactgcctggggttgaaggatttcaaggggcaaag
gggaacaagggtgaacctggtctgcctggtccccctggcccagacataccccctgcctca
cttaagggaataaagggagaccggggtcagccaggtgctaacgggctgccaggccagaag
ggtgtctctggtctcccaggagatccaggtccaccagggagagatgggctgtcaggatta
cctggaggaccaggtccaaaaggagatcaggggtttccaggtcaaccaggccctccagga
cttactggggctaagggtaacatgggtgacatgggattgccaggttcacctgggcagaag
ggagatctaggacagccaggtcgccatggccagccgggtcagccaggaaattctggactc
ccaggcaccaagggtgagccaggtctccctgtgtttggcagtccaggcaacccaggaccc
aagggtgaacctggacgacctggtttatctgggaaccatggacccaaaggccaacctggt
ataccaggtctccaaggtttacctggtacccaaggaccaaagggtgatcctggaccctct
ggattccaaggaccaccaggtatacctgggcctaaaggactgccaggccgcaatggacag
caaggaattcctgggcctccaggtcaacctggaccaataggcttccctgggcctcaggga
tcacttggagagaagggtcaggcaggacgtgatggcattcctgggccagcaggagagaag
ggagaaccaggtgaacctggttttggcacccctggacaaccaggccttccagggttacca
ggtccaaagggagatcctggtctgcctggacctgcaggaccccctggaattcggggacaa
aagggtgacccaggaaaccctggtccacctggcctccttggtagccctgggcccccaggg
cctcctggacatcctttgcatgggaccccaggtaacccgggtgtcccaggccctccagga
caacgcggccctacaggccctccaggttatcctggcccagaaggacctcctggccctcct
ggcggcggtggaattaaaggggaaaagggcccccctggtttcaatggtccacctggtagg
gatggggagaaaggcaagcctggcccctcaggcaatccgggttctactgggattcctggg
ccctctgggttaaagggagatctgggttcctctggagaacgaggccttccaggcccaaaa
ggtgcgccaggcaggcctggttttccaggtctcaatggagagctcggtgatcctggtccc
ccaggacctccaggttcccctgcctatggtaccccacccccaattataaaaggtgcacag
ggccctcctggcacccctggctatccagggatcagtggaccccctggacagccaggtcga
cctggtccccaaggtccacctggaaacattggagatcctggccttgatggtccttcaggg
ttcactggacccccaggacgcaaaggagattctggaccagtgggtaaatatggttcacgt
ggtgctccaggcccaccaggatcagacggaccccagggtccccctggtgcccccggatcg
agctctgctgccctcgggttcctcatcactcgccacagtcagaccaccgatgtgcccctt
tgcccagatggcaccagcttgatctacaatggctattcgctgctgtatgtacagggcaat
gaaagagcgcatggtcaggacctcggcacctcgggtagctgcttggccagatttagcacc
atgccctacatgttctgcgacatcaacaatgtctgcaactttgcctcccgtaatgactac
tcctactggctgtccacaccgcaacccatgcccatgagcatggcaccgatcaccggcaag
gacatcaagcctttcatcagcaggtgctcggtatgcgaagccccagccatggtgatcgca
gtccacagtcagaccatccgggtgccaagatgcccagacacatgggacctgctgtggatt
ggatactccttcatgatgcacaccagcgcaggggcagaaggctctggtcaggctctggca
tcccctggttcctgcctggaggagttccgcactgccccctttcttgaatgccacggccgg
ggcacctgcaactactatgccaactcctacagtttctggctcgcaactgtagatgcttca
gaaatgttcaggaagccacagccggagacactgaaagcagggaacctgctgacgcgtgtg
agtcgctgcgtggtctgcatgaaaaggacgtaa
DBGET
integrated database retrieval system
