Paramormyrops kingsleyae: 111846315
Help
Entry
111846315 CDS
T05788
Name
(RefSeq) collagen alpha-5(IV) chain-like isoform X1
KO
K06237
collagen type IV alpha
Organism
pki
Paramormyrops kingsleyae
Pathway
pki04510
Focal adhesion
pki04512
ECM-receptor interaction
pki04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111846315
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111846315
09142 Cell motility
04820 Cytoskeleton in muscle cells
111846315
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pki04147
]
111846315
00536 Glycosaminoglycan binding proteins [BR:
pki00536
]
111846315
Exosome [BR:
pki04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
111846315
Glycosaminoglycan binding proteins [BR:
pki00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111846315
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
111846315
NCBI-ProteinID:
XP_023672145
LinkDB
All DBs
Position
Unknown
AA seq
1690 aa
AA seq
DB search
MKNKNLKSLDNLAASLVFIILCFEIRNLESAACHGCVANTKCDCSGVKGTKGDRGFPGLP
GLQGLPGLPGPEGPFGPRGEKGDDGSTGLSGPKGIRGPLGLPGFPGTPGIPGLPGQDGAP
GPRGVPGCNGTKGERGFSGPPGFPGDPGPKGYHGPPGDKGDTGDIITVNHLGPKGDRGLP
GAPGLTGNPGHPGLPGPLGAPGPRGSDGFPGPPGPPGPKGNMGLNFQGPKGEKGDTGLRG
PPGPPGQIGEVTKPADSEVQKGEKGDHGPPGPPGDPGFPGLPGPARGQKGEKGEPGDSGK
RGKPGKDGEPGPTGFPGLKGEPGDPGPSGQHGPRGEKGEHGTPGPPGIVINGKGVSGLGP
KGNPGVPGFPGHKGDQGRQGPIGPPGQPGEPGIGYPGLPGQPGFPGPRGEKGDEGDPGFS
LPGLPGRPGQPGPQGQQGPPGRPGEAFNGGQCIEGPAGLPGNQGPQGFPGDVGQKGEKGE
TCHNCISEGIPVIGPPGPPGPPGFPGPPGFTGPQGEPGFPGLSGQTGPPGSQGPMGNSGI
PGQKGEPGEVNFLNGMKGNKGDPGFPGLPGLPGSDGKPGHAGVPGPPGPKGQPGSAHIKG
DQGPPGLPGISGSPGDPGPAGPPGIGLQGPPGLKGAQGVSGQSGSPGAPGPKGEPGKTVA
IKGGTGPRGETGDTGPPGPPGPLGQPGNPGFSGLPGPKGDPGPPGIGLPGLPGDKGFPGQ
PGLPGSPAVPGRPGLDGPPGPRGNPGPKGESGVGIPGPQGPPGFPGSKGTPGPKGDLGFP
GIPGSPGLPGLDGLPGPKGDPGHTGQPGFPGPPGTPGYGEPGPPGSPGPPGLMGPPGGPG
LQGDKGDRGLRGISLPGPAGDRGSPGSPGFPGTPGPSGPPGPVGRDGQPGSPGQKGEMGP
MGTPGYQGQPGIPGSSGPLGPKGDDGLPGLPGVEGFQGAKGNKGEPGLPGPPGPDIPPAS
LKGIKGDRGQPGANGLPGQKGVSGLPGDPGPPGRDGLSGLPGGPGPKGDQGFPGQPGPPG
LTGAKGNMGDMGLPGSPGQKGDLGQPGRHGQPGQPGNSGLPGTKGEPGLPVFGSPGNPGP
KGEPGRPGLSGNHGPKGQPGIPGLQGLPGTQGPKGDPGPSGFQGPPGIPGPKGLPGRNGQ
QGIPGPPGQPGPIGFPGPQGSLGEKGQAGRDGIPGPAGEKGEPGEPGFGTPGQPGLPGLP
GPKGDPGLPGPAGPPGIRGQKGDPGNPGPPGLLGSPGPPGPPGHPLHGTPGNPGVPGPPG
QRGPTGPPGYPGPEGPPGPPGGGGIKGEKGPPGFNGPPGRDGEKGKPGPSGNPGSTGIPG
PSGLKGDLGSSGERGLPGPKGAPGRPGFPGLNGELGDPGPPGPPGSPAYGTPPPIIKGAQ
GPPGTPGYPGISGPPGQPGRPGPQGPPGNIGDPGLDGPSGFTGPPGRKGDSGPVGKYGSR
GAPGPPGSDGPQGPPGAPGSSSAALGFLITRHSQTTDVPLCPDGTSLIYNGYSLLYVQGN
ERAHGQDLGTSGSCLARFSTMPYMFCDINNVCNFASRNDYSYWLSTPQPMPMSMAPITGK
DIKPFISRCSVCEAPAMVIAVHSQTIRVPRCPDTWDLLWIGYSFMMHTSAGAEGSGQALA
SPGSCLEEFRTAPFLECHGRGTCNYYANSYSFWLATVDASEMFRKPQPETLKAGNLLTRV
SRCVVCMKRT
NT seq
5073 nt
NT seq
+upstream
nt +downstream
nt
atgaagaataaaaacttgaagagtctggataatctcgccgcgagtctggtattcataatc
ctatgcttcgaaattcggaatttagagtcagcggcttgccatggctgtgtagcgaatacc
aaatgtgactgcagcggggtgaagggaaccaagggggacagaggctttccaggacttcca
ggcctgcaagggctaccaggcttaccgggacctgagggtccatttggaccaaggggggaa
aagggtgacgatgggtccacaggattatccggccccaaaggaattagaggcccgctgggg
ctgcccggatttcctggaacccctggaatcccaggtcttccaggacaagatggggcccca
ggtccaagaggggtcccagggtgtaacgggacaaagggtgaacgtggattttcaggaccc
cctggatttcctggggacccaggacccaagggttatcacggtcctccaggggacaaggga
gacactggtgacatcatcacagtcaatcatttaggaccgaagggagatcgaggactacct
ggcgccccgggtctaactggaaacccaggacatccaggattacctggtccacttggagca
cctggccccagaggctcagatgggttccctggacctcctggacccccaggacccaagggt
aatatgggcttgaacttccaagggcctaagggggagaagggggacacgggtctacgcgga
ccaccaggtcctccgggtcagatcggtgaggtgacgaaaccagcagactcagaggtgcag
aaaggagagaagggagaccatggaccaccagggccacctggagatcctggattcccagga
ctaccaggtccagcaagaggacagaagggtgagaagggagaacccggagattccggcaag
aggggcaaaccaggcaaagatggggaaccaggaccgactggcttcccgggtctgaaagga
gaaccaggtgatccaggtccttcagggcaacatggtccaaggggtgaaaagggtgaacat
ggaaccccaggacctcccggaatagtgattaatggaaaaggcgtttcgggactcgggcca
aaaggtaatccaggtgtcccaggatttccaggacataaaggagaccagggccgtcaaggt
ccaattggacctcctggacaaccaggggagccaggtatcgggtatccagggctgcctggc
cagcctggttttcctggaccgcggggagagaaaggtgacgaaggtgatccaggcttctcg
ctgccaggtctccctggcaggcctggacaaccaggtccccaaggtcaacagggaccccca
gggcgcccaggagaggcattcaatggtggacaatgcattgaagggcctgcagggctgcct
gggaatcagggtccacaaggcttcccgggagacgtcggccagaaaggtgaaaaaggggag
acatgtcacaactgcatttctgaaggaatcccagtaataggccccccagggccacctggt
cctccaggatttccaggtccgccaggcttcactggtccccaaggtgaaccagggtttcca
ggattatctggacagacaggaccaccaggttcacaaggcccgatgggtaattcggggatc
ccagggcagaaaggggagccaggagaagtcaactttcttaatgggatgaaggggaacaaa
ggtgaccctggcttccctggtctacctgggttacccggcagtgatggtaaacctggccat
gctggggtccctggcccacctggaccaaagggacagcctgggtctgcacacattaaaggt
gaccagggcccacctggactgcctggaatttcaggttccccaggagatcctgggcctgca
ggaccaccaggaattggactacaaggtccgcctggtctaaaaggtgctcaaggtgtatct
ggccaatcagggagccctggtgctccaggcccgaaaggtgaacccggaaaaactgtggca
ataaagggaggtacaggtcccaggggtgaaactggagatactggtcctcccgggccccca
ggcccactgggtcagcctgggaatcctggattctcaggattgcccgggccgaaaggagac
cctggacctccaggaattgggctgcctggccttccaggagataaaggattccccggtcaa
cctggacttcccggttcacctgcggttccaggacgccctggtctggatggccctcctggt
ccacggggcaatcctgggcccaagggagagtcaggagtcggtataccaggtccccaaggg
ccgccgggattcccaggcagtaaggggacccctgggcccaagggtgaccttggattccca
gggatccctgggtcacctggacttccaggtttagatggccttccaggacccaaaggtgac
ccaggtcatactggacaaccaggatttccaggacccccagggacccctggatatggagaa
ccggggcccccaggttcccctgggcctccaggacttatgggccctcctggtggccctggt
ctacaaggtgataagggcgaccgtggtctccgtggaataagcctcccaggaccagcagga
gatagaggcagccctggatcacctggctttcctggaacacctggtccctctggtcctcct
gggccagtaggccgtgacggtcaacctgggtcacctggccaaaagggtgagatgggtccc
atgggcacccctgggtaccagggccaaccaggtatccccggttcctcaggaccccttggg
ccaaaaggtgatgacggtttacctggactgcctggggttgaaggatttcaaggggcaaag
gggaacaagggtgaacctggtctgcctggtccccctggcccagacataccccctgcctca
cttaagggaataaagggagaccggggtcagccaggtgctaacgggctgccaggccagaag
ggtgtctctggtctcccaggagatccaggtccaccagggagagatgggctgtcaggatta
cctggaggaccaggtccaaaaggagatcaggggtttccaggtcaaccaggccctccagga
cttactggggctaagggtaacatgggtgacatgggattgccaggttcacctgggcagaag
ggagatctaggacagccaggtcgccatggccagccgggtcagccaggaaattctggactc
ccaggcaccaagggtgagccaggtctccctgtgtttggcagtccaggcaacccaggaccc
aagggtgaacctggacgacctggtttatctgggaaccatggacccaaaggccaacctggt
ataccaggtctccaaggtttacctggtacccaaggaccaaagggtgatcctggaccctct
ggattccaaggaccaccaggtatacctgggcctaaaggactgccaggccgcaatggacag
caaggaattcctgggcctccaggtcaacctggaccaataggcttccctgggcctcaggga
tcacttggagagaagggtcaggcaggacgtgatggcattcctgggccagcaggagagaag
ggagaaccaggtgaacctggttttggcacccctggacaaccaggccttccagggttacca
ggtccaaagggagatcctggtctgcctggacctgcaggaccccctggaattcggggacaa
aagggtgacccaggaaaccctggtccacctggcctccttggtagccctgggcccccaggg
cctcctggacatcctttgcatgggaccccaggtaacccgggtgtcccaggccctccagga
caacgcggccctacaggccctccaggttatcctggcccagaaggacctcctggccctcct
ggcggcggtggaattaaaggggaaaagggcccccctggtttcaatggtccacctggtagg
gatggggagaaaggcaagcctggcccctcaggcaatccgggttctactgggattcctggg
ccctctgggttaaagggagatctgggttcctctggagaacgaggccttccaggcccaaaa
ggtgcgccaggcaggcctggttttccaggtctcaatggagagctcggtgatcctggtccc
ccaggacctccaggttcccctgcctatggtaccccacccccaattataaaaggtgcacag
ggccctcctggcacccctggctatccagggatcagtggaccccctggacagccaggtcga
cctggtccccaaggtccacctggaaacattggagatcctggccttgatggtccttcaggg
ttcactggacccccaggacgcaaaggagattctggaccagtgggtaaatatggttcacgt
ggtgctccaggcccaccaggatcagacggaccccagggtccccctggtgcccccggatcg
agctctgctgccctcgggttcctcatcactcgccacagtcagaccaccgatgtgcccctt
tgcccagatggcaccagcttgatctacaatggctattcgctgctgtatgtacagggcaat
gaaagagcgcatggtcaggacctcggcacctcgggtagctgcttggccagatttagcacc
atgccctacatgttctgcgacatcaacaatgtctgcaactttgcctcccgtaatgactac
tcctactggctgtccacaccgcaacccatgcccatgagcatggcaccgatcaccggcaag
gacatcaagcctttcatcagcaggtgctcggtatgcgaagccccagccatggtgatcgca
gtccacagtcagaccatccgggtgccaagatgcccagacacatgggacctgctgtggatt
ggatactccttcatgatgcacaccagcgcaggggcagaaggctctggtcaggctctggca
tcccctggttcctgcctggaggagttccgcactgccccctttcttgaatgccacggccgg
ggcacctgcaactactatgccaactcctacagtttctggctcgcaactgtagatgcttca
gaaatgttcaggaagccacagccggagacactgaaagcagggaacctgctgacgcgtgtg
agtcgctgcgtggtctgcatgaaaaggacgtaa
DBGET
integrated database retrieval system
