Paramormyrops kingsleyae: 111846316
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Entry
111846316 CDS
T05788
Name
(RefSeq) collagen alpha-6(IV) chain-like isoform X1
KO
K06237
collagen type IV alpha
Organism
pki
Paramormyrops kingsleyae
Pathway
pki04382
Cornified envelope formation
pki04510
Focal adhesion
pki04512
ECM-receptor interaction
pki04518
Integrin signaling
pki04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111846316
04518 Integrin signaling
111846316
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111846316
09142 Cell motility
04820 Cytoskeleton in muscle cells
111846316
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
111846316
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pki04147
]
111846316
00536 Glycosaminoglycan binding proteins [BR:
pki00536
]
111846316
Exosome [BR:
pki04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
111846316
Glycosaminoglycan binding proteins [BR:
pki00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111846316
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
111846316
NCBI-ProteinID:
XP_023672147
LinkDB
All DBs
Position
Unknown
AA seq
1664 aa
AA seq
DB search
MKIWICLFAVFLTAASTHGGSKFQEACSGRDCSVRCPCYSEKGGRGQPGPLGPIGPNGSK
GSVGDQGPSGPKGEKGHPGIKGPSGPKGDKGPMGVPGFPGIDGVPGHPGLEGGGGPPGRD
GCNGSVGDVGLSGADGPEGPLGQLGPKGPKGQKGDPVYSERPNVGLKGEPGLPGLDGLIG
PRGEVGFPGMIGHRGPGGLPGRLGPPGLPGPAGSPGLGLKGEKGDKGDVGPPGDPGSPLS
NTVVEFMGFPKGDKGSKGDDGFKGIQGQPGFPGPSATFGSPGEVGEKGIIGLPGGRGVPG
LNGPHGPPGRPGFVGSLGVPGRPGFPGPKGYPGDPGPPGPTIYSDGPGQYVQGPPGEPGT
DGLPGPPGDQGPEGFPGQSGPPGVPSYIPDEPGARGFPGPPGLKGEKGNPGPPSDSLEGL
PGIPGPPGLPGPPGPKGVPNKFSERAGPPGPNGQRGPPGVPGIKGGKGDDGACQCLGDEG
VGLQGPEGTEGPHGMFGLDGPKGEVGDQGPQGFTGAPGPRGTKGEPGLPGPKGIKGDTFI
PAGLKGLKGNMGDQGPHGHPGDIGRPGIDGLPGFLGLPGPPGDTGAVGLPGNHGVPGPPG
LKGQPGRVGEPGFGYPGYAGIRGPPGDPGADGLLGQPGLPGPPGTTLPCQISGEDGEPGP
PGLPGPPGLEGQSGVPGKAGRLGFDGVKGERGEPGFGGLHGPQGFPGPRGDPGTPGLPGE
SRPGLSGRPGLPGLPGMKGQPGEVLDSLGAQGLPGLPGIDGAKGEPAEPGLSGTPGLDGH
TGNPGMKGERGVDGPVGIPGMPGPPGAAFGPPGPPGRKGLVGAPGCPGFPGPRGSLGDPG
TSGPPGVKGLTGPPGAPGSPGFQGFQGPPGVVGRDGIPGEPGLKGERGILGMLGFPGKSG
SPGGPGLPGAKGVPGSPGMEGLQGETGGKGQRGIQGNRGPPGPTPILPVLIKGDEGDRGP
SGLPGFPGPRGDKGVVGQPGPPGLSGFSGMVKGGPGLPGLPGPSGEPGFLGPKGSPGIMG
FPGMLGPQGEGGPLGSPGFTGSPGQDGQKGEQGDSPAIPGAPGLQGLTGDPGFPGDHGMP
GLPGDAGVPGRPDFSDQKGLPGEPGRPGSRGPPGSSGSQGQTGLPGMRGLQGFTGLPGSP
GPEGQKGRPGPPGLDGLNGLRGAIGPPGTPGSDEKGLPGLPGPAGPKGERGVGQLGACGV
PGEVGFRGDPGNPGTPGIPGLPGPRGISVTSDIVGPPGDPGLPGLDGEQGFQGPPGPPGP
AGPSTAQGDRGDPGPPGFSGLPGPRGDPGSLGAPGLPGGAGPIGAKGERGNPGVSGPPGQ
PGLVGDPGLFGIKGQKGARGPTGPKGCPWMVEVSVGDPGPVGVPGQIGENGSPGQPGLPG
PFGPKGAVGTQGNLGQIGQGGPPGPVGEPGLQGLSGLPGEQGTPGKQGPPGLPGRSARVS
SFGYTLVKHSQSSEVPACPEGLALLWEGYSLLYVEGQGKAHNQDLGLAGSCLPRFSTMPF
LYCNTNDICHFASRNDKSYWLSTSAPIPMMPVAEEQIPEYISRCSVCETSSQAVAVHSQD
LTIPPCPAGWRSLWIGYSFAMHTAAGAEGGGQSLVSPGSCLEDFRTTPFIECGGARGACH
YFSNKLSFWLTTVQPEMQLQEMETLKAGEALTRVGRCQVCIKVF
NT seq
4995 nt
NT seq
+upstream
nt +downstream
nt
atgaagatctggatttgtctctttgctgtgtttttgacagctgcgtccacgcacgggggt
tccaagttccaggaggcatgctcagggcgggactgcagtgtaagatgcccgtgctactcg
gagaaaggcggcaggggccagccagggcccctgggcccaatcgggccaaatgggtctaag
ggctctgtgggagaccagggcccctcggggccaaaaggtgagaaggggcatccaggaatt
aaaggtccatcaggcccaaagggagacaaaggaccaatgggtgtgccagggttcccaggg
atagatggcgttcctggtcatcctggcctggaggggggcgggggacccccaggccgtgac
ggctgcaacggctctgtgggtgatgtaggtctcagtggggcagatggcccagaaggacct
ctaggacagctgggaccaaaagggcctaaaggacagaaaggagaccctgtgtactctgaa
cgccccaacgtcgggctcaagggggagccaggcctgccgggattggatggactgattggc
ccccgtggtgaggttgggttccctggcatgattggacataggggtcctggcggccttcct
ggccggcttggtccacctggtttgccaggcccagcagggagcccagggcttggcctgaaa
ggggaaaagggagacaagggagatgtgggcccacctggggaccctggcagcccactcagc
aatacggttgtggagtttatgggctttcctaaaggagacaaaggatctaagggtgatgat
gggttcaagggcattcaaggccagccagggtttcctggaccttccgccacttttgggtcc
ccaggcgaggtgggggagaaggggattattggccttcctggaggacggggcgttccagga
ctgaatggacctcatgggcctcctggcagaccaggttttgtcggcagcctcggagtccca
ggcaggcctggattccctggccccaagggctatccaggagatccagggcccccaggacct
actatttacagtgatggcccaggccagtatgtgcaaggcccccctggtgagccaggaact
gatgggctacctgggccacctggagatcaagggccagagggcttcccagggcagtctggg
cccccaggggtcccatcctatattccagatgagccaggtgctcgtggttttccagggcca
ccaggactcaagggggagaaggggaaccctggcccgccaagtgacagcctagaagggctg
ccaggaattcctggtcccccaggtctcccaggaccccctggccctaaaggggtacccaac
aagttctctgagagagctgggccaccaggaccaaatggacagaggggacctcctggggtc
cctgggatcaaaggagggaaaggagacgatggggcctgccagtgcctgggggatgaaggg
gttgggttgcagggtcctgagggcacagagggccctcatggcatgttcggattagatggc
cccaagggcgaggttggtgatcaagggccacagggcttcactggtgctccaggtcccagg
gggaccaagggggagccaggcttgcctgggccaaagggaatcaagggtgatacattcatc
cctgcaggattaaaaggcttgaagggtaacatgggtgatcagggtccacacggccacccg
ggggatattggtcggccaggaatagatggactccccggctttctggggctgcctggacct
cctggtgacactggcgctgttggactccccggaaaccatggcgtccctggcccacctgga
ctgaaaggccagccaggccgagtgggagaacctgggtttgggtacccaggttatgctggc
atccgtggccctcctggagatccaggcgctgatggccttcttggacagcctggtttacct
ggccctccaggaaccacgctaccctgtcaaatctcaggtgaagatggagaaccagggccc
cctggtttgccaggccccccaggactggaaggacagtctggtgttcctggaaaagcgggt
cgactcggtttcgatggtgtaaagggtgagagaggcgagcctggctttggcggactgcat
gggccacaaggctttccggggccgcgaggggatccggggacccctggacttccaggggag
agcaggccgggactttctgggaggcccggacttccagggctgcctgggatgaaggggcag
ccaggcgaggtactggattcccttggggctcaaggcttacctggcctgcctggaatagat
ggagctaagggcgaacctgcggagccaggcctctcagggacccctggtctcgatgggcac
acagggaatcctgggatgaaaggggagcgtggagtggatggtccagtggggatcccgggt
atgcctgggcccccaggtgctgcctttggaccaccaggacctcctggaagaaagggactt
gttggagctccaggctgcccaggatttccaggaccccgaggctcattaggtgaccctggg
acctcgggacctcctggagtgaaggggctaactggaccgccaggagccccggggtcccca
ggatttcaagggttccagggccccccaggagttgtagggcgagacgggatccctggggaa
ccaggactgaagggtgagagagggattttgggaatgttgggtttccctggaaaatccgga
tctcctgggggtcctgggcttccaggggctaaaggagtgccaggttcccccggaatggag
ggattgcaaggagagactggcggaaagggtcagagagggatccaggggaaccgtggacct
cctgggccgacacccatcttgccagtgctgataaagggggatgaaggagacaggggacct
agtgggcttcctggctttccaggtccaagaggtgacaaaggtgttgtgggtcagcctggt
ccgcccggcctgtctggcttctccggcatggtgaagggtggcccaggactccctggtcta
ccaggaccctcaggagaacctggtttccttggtccaaagggctcaccgggtataatgggt
ttccctggcatgcttgggccacagggggaaggcggtccacttggatcacctggatttaca
ggaagtcctggacaggatgggcagaagggtgagcagggtgattcccctgccatacctgga
gcccctggtcttcaaggtcttaccggagaccctggattcccaggtgaccatgggatgcca
ggcttgccaggagatgcaggtgttcctggaagacctgatttcagtgaccagaaaggcctt
ccaggggaaccaggcagaccaggttcaaggggacctccgggctcctctggcagtcaaggc
cagactggcctcccaggcatgagaggcctgcagggcttcactggccttcctggatcccct
ggccctgaaggccagaaaggacgtcctggtcctcctggacttgatgggctcaatggactg
agaggggccattggtccaccaggaaccccaggttcagatgaaaaaggccttccagggctt
cctggtcctgctggccctaagggggaaaggggcgttggccagctcggtgcctgtggtgtc
cctggggaggtgggcttcagaggagatccaggtaaccccgggacgccgggcattcctggc
cttcctgggcccagaggcatctctgtgacctccgacattgtaggccctcctggagaccct
ggtttacctgggctagatggagagcaagggttccaaggacctcctggcccccctggtcct
gctgggcccagtactgcccagggtgacagaggagacccaggtccccccggcttctctggc
ttgccgggtccacgtggggatcctggaagcctgggagctccaggactgccaggcggtgct
ggacccattggggccaaaggagaaagagggaaccctggtgtcagtggccccccagggcag
ccaggtcttgtgggtgaccctgggttgtttggaatcaagggacagaagggtgcccgaggt
cccactggaccaaagggttgcccttggatggtggaggtgtcagttggggatcccggtcct
gttggtgttcctggtcagattggagagaatggcagcccagggcaacctggtctaccaggg
ccttttggtccaaaaggggcagtgggaacccaaggaaacctgggacaaattgggcaagga
ggcccaccaggacctgttggagagcctggacttcaggggctttctgggctgcctggagag
caaggcacccctggcaaacagggccccccagggctgccaggcagatccgcgcgagtcagc
agttttggctacactctggtgaagcacagccagagcagtgaggtgcccgcctgccctgag
ggcttggcactgctctgggaggggtacagcctcctttatgtggagggccaggggaaagcc
cacaaccaagacctcggtctggctgggtcctgcttgccccgtttcagcaccatgcccttc
ctctactgcaacaccaatgacatatgtcacttcgccagccgcaatgacaagtcttactgg
ctgtccacgtcggcgcccattcccatgatgcccgtggccgaggagcagattccagagtac
atcagtcgctgctccgtgtgtgagacgtcctcccaggcggtggctgtccacagccaggac
ctcaccattcccccctgccctgcgggatggcgtagcctgtggatcggctactcctttgcc
atgcacactgcggccggggcagagggaggagggcagtccctggtgtcaccgggctcctgt
ctggaggacttccgcaccacgcccttcatcgagtgcggtggcgcccgaggggcttgccac
tatttctccaacaagctgagcttctggctcaccacagtgcagccggagatgcagctccag
gaaatggagacgctgaaggccggagaggcactcacccgcgtcggacgctgccaagtttgc
attaaggttttctag
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integrated database retrieval system
