Paramormyrops kingsleyae: 111847140
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Entry
111847140 CDS
T05788
Symbol
edc4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
pki
Paramormyrops kingsleyae
Pathway
pki03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111847140 (edc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pki03019
]
111847140 (edc4)
Messenger RNA biogenesis [BR:
pki03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111847140 (edc4)
mRNA degradation factors
5'-3' decay
Decapping complex
111847140 (edc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_HPS5
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_Prp19
Pdc1_Ge1
Motif
Other DBs
NCBI-GeneID:
111847140
NCBI-ProteinID:
XP_023673830
Ensembl:
ENSPKIG00000002209
UniProt:
A0A3B3RBB2
LinkDB
All DBs
Position
Unknown
AA seq
1406 aa
AA seq
DB search
MASNSNIDIEDATQHLRDILKLDRPENNAEPSSTENQTKTAFNGELNGLFGSGLIGVADR
EPAAEAGAGKAENMSCQDPQIICLSGDDSSTRVTISSSVVEIVASHNSSINSKACGSNKV
KIKPVAKYDWEHKYYYGSLIAVSNSYLAYAIRGANNCAMIRVLSQCTAERTLLKGFTGAV
ADLAFAHLDSSQLACLDEAGNMFIWQLSCSAGKIQDEILVHIRRPADTPLSSNRRLIWCP
FIPEENEEGPEESCQTLALLHEDRAEVWDLDILRSTQHSWPVDASDLKEGFIVVRGHSGR
ISEGVLSPDGTVLATASHDGFLKFWQIYIEGQDQPRCLHEWKPHDGRPLSCLLFCDNHKK
QDPEVPFWRFLITGADQNRELKMWCTVSWTCLQTIRFSPDPFNSIVLPSLKVALDLSAGY
LVLSDVQRKVLYVMEVQQNQEKGRARFTAVSEFLLTHPVLSFGLQDVSCCRLQPSEVLPP
DEDSESMTTEGSQGGLAESKTGVQIHLYCIHTKCLQDVQIWFQPHVTPSTSLLLPPSDSQ
EDFGCCELLADTNTEGPASDKESGRPSQGDLRRVPSLPIPADFLPPSEGTKPTLMTPDAF
MTPTASIPASPGSSVSSLTVVTAMSSSSTSGRTGEELTQSSKVSLESSALALGSASGSGS
SSASGSAHSSPRSSSILIPGLGDQMNSSNIQVAAPLNPPLSLDLQAIEPLLVPQASPTRE
RSPDVISSASTAMSLDIPEIASETLPRVGVPPLAPEVRSPALHSDSMASAASALHLLSPR
NRSGSEHGRPSLDLGGGGGAGGGGATADGERLSATPSLLEAALSQEGAAACPLEPSVSWP
AAPDITRETRDSLADCSRDEMKDKHKTSPFHRHSYGLPLNDSQDASAEQSDHDDEVASLA
SSSGNCASRTSHRLPVKDWKVSPRSSPKLKKKCRKDDGESLQSRQPDQLMGLDTQEEVLQ
MLRSQQRELSELRQSQLELMQRLTASMDAIQSSVLAIVEQAMINQQEQSQRRMERMMAEG
REQNRQLQEHLSQQVTQNLSTALCGRMDKLLREEMKKSIPQAISKSLDPVTGQMNSTIAA
KLTAVEGALKENVTKVVKSKNTTDAIGKAAAEAMQGPIQAAYKEAFQGIVLPVFEKGCQS
MFQQINDSFKQGTHEYIQQLESHLKNKKQRELEARDPLIGQLQQMVDTLQSSTDQLAATV
TASVRSEVQHQLHIMVGNLQDSILTQVQRIVKGEVSLAMKEQQAAVTSSIMQAMRSAAGT
PVPPALLDYQAQQQNVLQLLQQGQFNQAFQQALSAADLNLVLYVCETIDSQQVFSQHPCP
LIQPVLLSLIQQLSTNLTTRSELKISYLEDAVMNLDHSDPVTRDHMSSVLTQVRQKLFQF
LQLDPHSPLSKRARRLMMMLQGLVTQ
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaactcaaatatcgatatagaagacgcgacgcagcatcttcgggatattttg
aagttggaccgacccgagaataacgccgaaccgtcttccaccgagaatcaaactaagacc
gctttcaacggggagctcaatggcttgttcgggtcgggcctcataggcgttgcggaccgg
gaaccggcggccgaagccggcgccgggaaagcggagaacatgagctgtcaggacccgcag
atcatctgcctctctggggatgacagctccactcgtgtcaccatctcctccagcgttgtg
gagatcgtggccagtcacaactccagcatcaacagcaaagcttgcggcagtaacaaggtg
aaaatcaagccagtggcaaagtatgactgggaacacaagtactactacggcagcctgata
gcggtgtccaactcctacctggcctatgcaatcagaggtgccaacaactgcgcgatgatc
cgcgtgctgtcccagtgcacggcggagcgcacgctgctcaagggcttcaccggcgccgtc
gccgacctggccttcgctcacctggactcctcccagctggcctgtctggacgaggcagga
aacatgttcatctggcagttgtcctgcagtgccggcaagatccaagatgaaattttggtg
cacatcaggcgacccgcagacacgccactcagctcgaaccggaggctgatctggtgcccc
ttcatccctgaggagaacgaggaaggccctgaagagtcctgccaaacgctggccctgctc
catgaggacagggcagaggtctgggatctggatatcctcaggtccacacagcactcctgg
ccagtggatgccagtgacctgaaggagggcttcatcgttgtcaggggccacagcgggcgc
atcagtgaaggggtcctttctcccgacggcaccgtcctggccactgccagtcacgatggc
ttcctgaaattctggcagatctacatagaaggccaagaccagcccaggtgtctccacgag
tggaaaccccacgacggccgacctctgtcctgcctgctgttttgcgataaccacaagaag
caggatccggaagttcccttctggcgtttcctgattaccggtgcggatcagaaccgggag
ctgaagatgtggtgcacggtttcatggacctgtctacagacgatcaggttttctccggac
ccctttaactccatcgtcctgcccagcctgaaggtggcgctggacctgtctgctgggtac
ctggtcctcagcgacgtgcagcggaaggtgttgtatgtgatggaggtgcagcagaaccag
gagaaaggccgcgcccgcttcacggctgtctccgagttcctgctcacccaccccgtgctc
agcttcggtctgcaggacgtcagctgctgccggctgcagcccagcgaggtgctgcccccc
gacgaggacagtgagagcatgaccactgaaggaagccagggtggtctggctgagtctaaa
acaggcgtgcagattcatctctactgcatccataccaagtgcctccaggacgtgcagatc
tggttccagccccatgtcaccccgagcacctccctgctcctgcctccttccgactcccag
gaggatttcggctgctgtgagctcctggcagataccaacacggagggcccggcgtcggat
aaggagtcggggcgcccctcgcagggcgacctgcggcgggtcccctccttacccatcccg
gctgacttcctgccgccttccgagggcaccaagcccacgctgatgacgccggacgctttc
atgacccccactgcttcgatcccagcttctcccgggagcagcgtcagcagcctgacggtg
gtaacggccatgagcagctccagcaccagcggcagaacgggcgaggagcttacccagagc
tcaaaggtttctttggaaagcagtgcattggccctgggttctgcctccgggtctggctcc
agttctgcgtccggctcggcccacagcagcccccgctccagcagcattctcattcctggt
ctgggggaccagatgaacagcagtaacatccaggtggcggcaccacttaacccacccctg
tccctggacctgcaagccatcgagccactcctcgtcccccaggcatcccccacgcgggag
cgctcaccggacgtcatctcgtctgcgtccacggccatgtccctggacatccccgagatc
gcctcagagaccctgcctcgagttggcgtgccgcctctggcaccggaggtgcgcagccct
gccctccactctgacagcatggcgtcggccgcctcagcattgcacctgctctccccacgc
aaccgcagcggctcggagcatggccggccctccctggacctgggaggcggcggcggtgcg
ggcgggggcggggccacggccgatggggagaggctcagcgccaccccctcgctgctagag
gccgccctgtcccaggagggtgctgccgcatgcccattggagcccagcgtgagctggccc
gctgcccctgacatcacccgtgagacacgagacagcctggcagactgctcccgagatgag
atgaaagacaagcacaagacgtcacccttccacagacactcctacggcctgcccctgaac
gacagccaggatgccagcgccgaacagagtgaccatgacgacgaggtggcgagcctggca
tcgtcgtctgggaactgcgcctccaggacatctcacaggcttcccgtgaaggactggaaa
gtctccccccggtcatcccccaaactgaagaagaagtgcaggaaagatgatggagaatct
ctgcagtcgcggcagcctgatcagctgatgggcctggacacacaggaggaggtgctgcag
atgcttcgcagccagcagagggagctctctgagctacggcagagccagctggagctcatg
cagcgtctgacggccagcatggacgcaatacagagctccgtcttggcgattgtggagcag
gccatgatcaaccagcaggagcagagccagcgccggatggagcgcatgatggcagagggg
cgcgagcagaaccggcaactgcaggagcatctgtcccagcaagtaacgcagaacctgagt
accgctctctgtggccgcatggacaagctgctccgggaggaaatgaagaagagcatccct
caggcgatctccaaaagcctggaccctgtcacggggcagatgaacagcactatcgccgcc
aagctgaccgccgtggaaggagcattgaaggagaacgtcaccaaggtggtcaagtccaag
aacaccacggacgccatcggcaaggcggcggcagaagccatgcagggtcccatccaggct
gcatacaaggaggcctttcagggcatcgtgctgcccgtgttcgagaagggctgccagtcc
atgttccagcagattaacgacagcttcaagcagggcacccacgagtacatccagcagctc
gagagccacctgaagaacaagaagcagcgcgagttggaggcgcgggacccgctgatcggg
cagctccagcagatggtggacacccttcagagcagcacggaccagctggccgccaccgtg
accgccagcgtgcgctccgaggtccagcaccagctgcacatcatggtgggaaacctgcag
gactccatcctgacgcaggtgcagcgtatcgtcaagggcgaggtgagcctggccatgaag
gagcagcaagcggccgtcacctccagcatcatgcaagccatgcgctcggccgccggcacg
cccgtgccccccgccctcctcgactaccaggcccagcagcaaaacgtgctgcagctgctg
cagcagggccagttcaaccaggccttccagcaggccctgtcggcagctgacctgaacttg
gtgctgtacgtgtgcgagaccatcgactcccagcaggtgttcagccagcacccctgtccg
ctcatccagcccgtcctgctctcgctcatccagcagctgtccaccaacctgacgacccgc
tccgagctgaagattagttacctcgaggacgcggtgatgaacctggaccacagcgaccct
gtgacccgggaccacatgagctctgtgctgacgcaggtgcgacagaagctgttccagttc
ctgcagctggacccgcacagcccgctcagcaaacgggcacggcgcctgatgatgatgctg
cagggcctggtcacccagtag
DBGET
integrated database retrieval system
