KEGG   Paramormyrops kingsleyae: 111847445
Entry
111847445         CDS       T05788                                 
Symbol
prpf4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
pki  Paramormyrops kingsleyae
Pathway
pki03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pki00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111847445 (prpf4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pki03041]
    111847445 (prpf4)
Spliceosome [BR:pki03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    111847445 (prpf4)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40_Prp19 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_CDC20-Fz WD40_Gbeta Beta-prop_WDR3_2nd Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_EML WD40_MABP1-WDR62_1st PRP4 NBCH_WD40 WDR90_beta-prop_4th Beta-prop_Aladin Beta-prop_DCAF4 Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_Vps41 Beta-prop_EIPR1 Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_WDR41 WD_LRWD1 Beta-prop_IFT140_1st WD40_like Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_WDR35_TULP_N Beta-prop_WDR11_1st Tricorn_2nd
Other DBs
NCBI-GeneID: 111847445
NCBI-ProteinID: XP_023674390
Ensembl: ENSPKIG00000017259
UniProt: A0A3B3TC18
LinkDB
Position
Unknown
AA seq 506 aa
MSDEEETPVAKKARIFYGSLEEKERERLGREGGAAASDAVKAGIEAGHINISSGESMELE
ERVSERQAEVLAEFERRKRARQITVSTDDAEVKACLRALGEPITIFGEGPAERRERLRNI
LSVVGPDALKKSKKEDEKAKRSQEEYQQTWYHEGPTTLKEARLWLARYSLPRATLRLDDA
RALKEVPESTRTVRQQELHKTLRNLNNFCSQIGDDRPISYCQFSPNSKLLVTASWSGLCK
LWAVPDCSLVRTLRGHNTNVGAISFHPQATISLDESDVNMASCAADGSVKLWSLDSDEPV
ADIEGHSMRVSRVAWHPSGRFLGTTCYDHSWRLWDLEAQEEILHQEGHSKGVHDLHFHPD
GSLAATGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGFHMATGSGDNTCKVWDL
RQRKCIYTIPAHQNLISSVKFQPTDGHYLLTGAYDNTAKVWTHPGWSPLKTLAGHEGKVM
GLDVSADGQLIATCSYDRTFKLWMSE
NT seq 1521 nt   +upstreamnt  +downstreamnt
atgtcggacgaagaggagactccagtggccaagaaggcccggatcttctatggcagcctg
gaggagaaggaacgggagcggctgggccgtgagggaggagctgctgccagtgacgcagtg
aaggcgggcatcgaggccggccacatcaacatctccagcggggaatccatggagctggag
gaacgggtgagcgagcgacaggcggaggtgctggcagagtttgagcgcaggaagagggcc
cgacagatcactgtctccactgatgatgcagaggtcaaggcctgcctgcgggctctgggg
gagccaatcacgatcttcggggagggcccagctgagagacgggagaggctgcgaaatatc
ctgtcagtggttggaccggatgctttgaaaaagtctaagaaggaagatgagaaggccaag
cgctcacaggaggagtaccagcagacctggtaccatgagggccccaccacactgaaggaa
gcccgtctctggttggcccgctattccctgccccgggccacgctgcggttagacgacgct
cgggctctgaaggaggttcccgaatcgacgcgcacggtgcgtcagcaggaactccacaag
acgctgaggaacctgaacaacttctgtagccagatcggtgatgaccggccgatctcgtac
tgtcagttcagccctaactccaagctgctggtcactgcgtcctggagtggcttgtgcaaa
ctgtgggctgtgcccgactgcagcctcgttcgcactctgagagggcacaacaccaatgtg
ggggccatcagcttccacccccaggccacaatatcactggacgaatcagacgtaaacatg
gcttcctgtgcagccgacggatcagtcaaactttggagtctagacagtgatgaacccgtg
gcagacattgaagggcactcgatgagggtgtcccgtgtggcctggcacccgtctggacgc
tttctggggactacatgctacgatcactcgtggagattgtgggaccttgaagcccaggag
gagatcctacatcaggagggccacagcaagggggtgcatgacctacacttccaccctgat
ggctctttggctgcaactggagggctggatgctttcggtcgagtgtgggacttgcggact
gggcgctgcatcatgttcttggagggccacctcaaggagatctacggcatcaacttctcg
cccaatggcttccacatggcaactggaagtggtgataacacctgcaaggtgtgggacctt
cggcagaggaagtgcatctacaccatccctgcccaccagaacctgatctcctccgtcaaa
ttccagcccacagacggtcactatttgctgacgggggcctacgataacacggccaaggtg
tggacacacccgggctggtcccccctgaagacgctggccggccacgagggcaaggtgatg
gggctggacgtgtcagcggacgggcagctcatcgccacttgctcctatgaccgcaccttc
aagctctggatgtctgagtga

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