Paramormyrops kingsleyae: 111847552
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Entry
111847552 CDS
T05788
Symbol
prpf40a
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
pki
Paramormyrops kingsleyae
Pathway
pki03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pki00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111847552 (prpf40a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pki03041
]
111847552 (prpf40a)
Spliceosome [BR:
pki03041
]
Complex A
U1 snRNP components
U1 related factors
111847552 (prpf40a)
Complex B
111847552 (prpf40a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
Motif
Other DBs
NCBI-GeneID:
111847552
NCBI-ProteinID:
XP_023674641
Ensembl:
ENSPKIG00000000102
LinkDB
All DBs
Position
Unknown
AA seq
910 aa
AA seq
DB search
MSSADGGNGPGQPAPFPGVPPSGMPPPFMGPPGMPPHYPPMGMPPSMAPMPPGMMPPMMP
PMGGPPMGQMPGMMPPMMPGMMIPPRMAAAAMQPTGPPGVSPAEAAASSASGTLTSNPAV
SSMQQGVTASPKDEQPKKKSVWTEHKSVDGKTYYYNTETKQSTWEKPDDLKSPAEQLLSK
CPWKEYKSDTGKPYYYNSQTKESRWTKPKELEDLEAMINSEENGSTEPPVSTAPTSATQV
ESAVAVTTTTAPPEAETIAPVVVVEEQVPQAAVVTTTVPAVEVSTETPVSSVEPTPVVET
PVSTETPKEEERPELVKKVYKWNTKEEAKQAFKELLKEKGVSSTASWEQAMKMIINDPRY
SALPKLSEKKQAFNAYKVQTEKEEKEEARIKYKESKETFQRFLENHDKMTSTTRYKKAEQ
MFGELEVWTTVPERDRLEIYEDVLFYLAKKEKEQSKHLRKRNWEALKNILDNMANVTYRT
TWSEAQQYLLDNPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEEKQKSLLRERRRQR
KNRECFQKFLDELHDHGQLHSMSSWMEMYPTISSDIRFSNMLGQIGKMVIPTGSTPLDLF
KFYVEDLKARYHDEKRIIKDILKDKGFNVEVNTAFEDFGSVISSDKRATTLDAGNIKLAF
NSLLEKAEAREREREKEEARKMKRKEAAFKSMLKQATPPLEPNSTWEGVRDRFLKESAFE
DITLESERKRIFKDFIHVLEHECQHHHSKNKKHSKKSKKHHRKRSRSRSGSESEEDDYHT
KKKKRSLSKSPSERSSSGESERSSKKSKKHKKKGKKRRHKSGSPESEGERERKGRDRARE
REREREREKERERDKENDKSRGKPRVEPKPKSPKRKSAKEEGGWDTSGSELSEGELEKRR
RTLLEQLDAP
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggcagatggtggtaatggccccggccagcctgctccttttccgggtgttccc
ccgtctggcatgcctccgccatttatgggcccacctgggatgccgccacattacccgcct
atggggatgccaccaagcatggcgcccatgccccccggcatgatgcccccgatgatgccc
ccgatgggaggcccgcccatggggcagatgccgggcatgatgccgcccatgatgccagga
atgatgataccccctcggatggcagccgctgccatgcagccgacgggaccgccaggtgtc
agcccagcagaggcagctgcttcatctgcttctggaacattgacgagcaatccggccgtg
agcagcatgcagcaaggcgtgacagccagcccaaaggacgagcagccaaagaagaagtcg
gtgtggacggagcacaagtctgtggacgggaagacgtactactacaacacagaaactaag
cagtccacctgggagaagcccgacgatctcaagtccccggccgagcaactgttgtccaag
tgcccctggaaggagtacaagtctgacacggggaagccatattactacaactctcagact
aaggagtcccgctggaccaagcccaaggagctggaggatttagaagctatgataaacagt
gaagaaaatgggtccacggagccccctgtcagcacggcccccacgtcggccacccaggtg
gagagcgccgttgccgtgacaaccacgacggccccgcctgaggcggagaccatcgccccg
gttgttgttgtcgaggagcaggtgccccaggcagcggtggtgacgacgactgtgccggca
gtcgaagtcagcacagagacaccggtcagctccgtggagcccacacctgtggttgagacc
cccgtcagtacggaaacccctaaagaggaggagagacctgagcttgtgaagaaggtctac
aaatggaatacgaaggaggaggcgaagcaggccttcaaggaacttctgaaggagaaggga
gtctcctccacggcgtcttgggagcaggcgatgaagatgatcatcaacgaccctcgttac
agcgcgctgcccaagctgagcgagaagaagcaggccttcaacgcctacaaggtgcagacg
gagaaggaggagaaggaagaggccaggatcaagtacaaggagtccaaagagacgttccag
cgcttcctggagaaccatgacaagatgacgtccactaccagatacaagaaagcagagcaa
atgtttggagagttggaggtgtggactacagttccagagcgtgaccgactggagatctat
gaggatgtcctcttttacttggccaaaaaggagaaggaacaatcgaagcatttgagaaaa
cgcaactgggaggctctgaagaacatcctggacaacatggccaacgtgacgtaccgaacc
acatggtcagaggcccagcaatacctgctggacaatcccacattcgctgaggatgaggaa
ctgcagaacatggacaaggaagacgctcttatctgttttgaggagcacatccgtgccctg
gaaaaagaagaggaggaggaaaagcaaaaatcgcttcttcgggagaggcgcagacagcgc
aaaaacagggaatgcttccagaaatttctggatgagctccatgaccatggccagctccac
tcaatgtcctcctggatggagatgtatcctactatcagctctgacatccgcttttccaat
atgcttggccagattggtaagatggtcatccccacagggtctacgcctctggatctattc
aagttctacgtggaggacctgaaggcacgttatcatgatgagaagagaatcatcaaggac
atcctgaaggacaaaggcttcaacgtggaggtcaacaccgccttcgaggacttcggctca
gtgatcagctctgataaaagggcgacaacacttgacgctggaaatatcaagctcgccttt
aacagtttactggaaaaagcagaggcacgggaaagagagcgggagaaagaggaggccagg
aagatgaagaggaaggaggctgctttcaagagcatgctgaaacaagccaccccacccctg
gagcccaactccacttgggagggggtcagggatagattcctgaaggaatcagcatttgaa
gatatcactctagagtccgaaagaaagaggatattcaaggacttcattcacgttttggag
cacgagtgccagcaccatcactcgaagaacaagaagcattccaagaagtcgaagaagcac
cataggaagcgttcccgatcccgctcggggtccgagtcggaggaggatgactatcacacg
aaaaagaaaaagcgctcgctgtccaagtccccctcggagcgctcctctagtggcgagtcc
gagagaagttccaaaaaatcaaagaagcacaagaagaagggaaagaagagacgacacaag
tctggctccccagagtccgagggggaacgggagaggaagggacgagaccgggcccgagag
agggagcgagagcgcgagagggaaaaggaacgggagcgagacaaggagaacgacaagtcc
agggggaagccacgggtggagcccaagcccaagtcccccaaaaggaaatccgctaaggag
gagggtggctgggatacctcaggcagcgagctgagcgaaggagagctggagaaaaggagg
aggactctattggagcagctggacgccccctga
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integrated database retrieval system
