KEGG   Paramormyrops kingsleyae: 111848012
Entry
111848012         CDS       T05788                                 
Symbol
ddb1
Name
(RefSeq) DNA damage-binding protein 1
  KO
K10610  DNA damage-binding protein 1
Organism
pki  Paramormyrops kingsleyae
Pathway
pki03420  Nucleotide excision repair
pki04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pki00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    111848012 (ddb1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    111848012 (ddb1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pki04121]
    111848012 (ddb1)
   03400 DNA repair and recombination proteins [BR:pki03400]
    111848012 (ddb1)
Ubiquitin system [BR:pki04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     111848012 (ddb1)
DNA repair and recombination proteins [BR:pki03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      111848012 (ddb1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      111848012 (ddb1)
SSDB
Motif
Pfam: CPSF_A Beta-prop_RSE1_1st Beta-prop_RSE1_2nd Beta-prop_IFT122_1st Beta-prop_RIG_2nd
Other DBs
NCBI-GeneID: 111848012
NCBI-ProteinID: XP_023675462
Ensembl: ENSPKIG00000019213
LinkDB
Position
Unknown
AA seq 1139 aa
MSYNYVVTAQKPTAVNACITGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK
IAVMELFRPKGESKDLLFILTAKYNACILEYKQTGESIDIITRAHGNVQDRIGRPSETGI
IGIVDPECRMIGLRLYDGLFKVIPLDRENRELKAFNIRLEELQVIDVHFLYGCQVPTVCF
IYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIPVPEPFGGAIIIGQESITYH
NGDKYLAIAPPTIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEELMDGAVVLKDL
RVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNDQGSYVAVMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSVAGRE
TDDMLVLSFVGQTRVLMLSGEEVEETELPGFVDNQQTFYCGNVAHQQLIQITSGSVRLVL
QNTKALVSEWKEPQGRNISVAACNSTQVVLAVGRVLYYLEIHSGELKQISSTEMEHEVAC
LDITPLGEGADSPLCAVGLWTDISARILKLPNFTTMHKEMLGGEIIPRSILMTTFEGCHY
LLCALGDGALFYFGLDLQTGVLSERKKVTLGTQPTVLRTFRSLSTSNVFACSDRPTVIYS
SNHKLVFSNVNLKEVNYMCPLNSEGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESP
RRICYQEVSQCFGVLSSRVEMQDASGATSPVRPSASTQALSSSVSSSKLFPSSTSPHETS
FGEEVEVHSLLVVDQHTFEVLHAHQFLQSEYALSMVSCRLGKDPAVYFVVGTAMVYPEEA
EPKQGRIIVFHYTDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELRT
ECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAIEILD
DDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGVFHLGEFVNVFCHGSLVLQNLGESS
TPTQGSVLFGTVNGMIGLVTSLSEGWYSLLMDLQNRLNKVIKSVGKIEHSFWRSFHTERK
TEQATGFIDGDLIESFLDLGRAKMQEVVSTLQIDDGSGMKREATVDEVIKIVEELTRIH
NT seq 3420 nt   +upstreamnt  +downstreamnt
atgtcttataactacgtggttaccgcacagaaacccacggccgtgaatgcctgcattact
gggcatttcacgtccgctgaggatttgaatttgcttattgctaagaacacacgactggag
atctatgtggtgacagcagagggactgcggcccgtaaaggaagtgggcatgtatggcaag
attgctgtcatggagctcttcaggccaaagggcgagagtaaagacctgctgttcatcctg
acggccaagtacaacgcctgcatcctggagtacaagcagaccggggagagcattgacatc
atcaccagggcccacggcaacgtccaggatcgcattggacggccttcagagacgggcatc
atcggtatcgtggacccagagtgtcgcatgatcgggttgcggctctatgatggcctgttc
aaggtcatccccctagaccgggagaaccgtgagctgaaagccttcaacatacggctagag
gagctgcaggtcatcgacgtgcacttcctgtatggctgtcaggtccccactgtctgcttc
atctaccaggacccacagggacgtcacgtgaagacgtatgaggtgtcactgcgggaaaag
gagttcaacaaaggaccctggaagcaggagaacgtggaggctgaagcctcgatggtcatt
ccagtcccagagccgtttggaggagcaataatcatcggccaggagtccatcacataccac
aatggagacaaatacctggccatagcccctcccaccatcaagcaaagcaccatcgtgtgt
cacaaccgcgtggatcccaacggctcccgctacctcctgggagacatggagggccgactc
ttcatgctgctgctggagaaggaggagctgatggatggggccgtggtgctgaaggacctg
cgggtggagctactgggagagacttccattgccgaatgcctcacatacttggacaatgga
gtggtttttgttggctctcgtcttggggactcccagcttgtgaagctgaacgtggacagt
aacgatcagggctcctacgtggcggtgatggagaccttcacgaacctggggcccatcgtg
gacatgtgtgtggtggatcttgagagacagggacagggacagttggtcacctgttctggg
gcgttcaaggagggatccctaaggatcatccgcaacggcatcgggatccacgaacacgcc
agcatcgacttgccagggatcaagggcttgtggccgctgcggtccgtcgctggccgggag
acggacgacatgctggtgctctcctttgttggccagaccagggtcctgatgttgagcggg
gaggaagtggaggagactgagctcccgggctttgtggacaatcagcagaccttctactgt
gggaacgtggctcaccagcagctcatccagatcacatcgggctcagtgaggctggtgctc
cagaacaccaaggctctggtaagcgagtggaaggaaccacagggcaggaacatcagcgtg
gctgcatgcaactccacccaggtggtcctggccgtgggccgcgtgctctactacctggag
atccactctggagagctcaagcagatcagctccacggagatggagcacgaggtggcctgc
ctggatatcacgcccctgggagagggagcagactcgcccctctgtgccgtggggctctgg
accgacatctcggcccgtatcctcaagctacccaacttcacgaccatgcacaaggagatg
ctgggtggagagatcatccctcgctccatcctgatgaccacgtttgagggctgccactac
ctgctgtgcgcactgggggatggagcgctcttctacttcggtctggatctccagacaggt
gtcctcagcgagcgcaagaaggtgacccttggcacgcagcctaccgtcctgcgtaccttc
cgatccctctccacctccaacgtgttcgcctgctccgaccggcccactgtcatttactcc
agcaaccacaaactggtcttctccaatgtcaacctcaaggaggtcaattacatgtgtccc
ctcaactctgagggctaccctgacagcctggcgcttgccaataacagcactttgaccatc
ggcaccatcgacgagatccagaagctgcacatccgcaccgtgcccctttacgaatccccc
aggaggatctgctaccaggaggtgtcccagtgtttcggggtgctctccagcagggttgag
atgcaggatgcgagtggggccacctctcctgtccggcccagtgccagcacccaggccctg
tccagcagcgtcagctccagcaagctcttccccagcagcacctccccccatgagacttcc
ttcggggaggaggtggaggtgcacagcctgctggtggtggaccagcacacgtttgaggtc
ctccatgcccaccagttcctacagagtgaatatgccctgagcatggtgtcctgccgcttg
ggcaaagaccctgccgtctactttgtcgtcggcacggcgatggtgtaccccgaggaggcg
gagcctaagcagggacgcataattgtgttccactacactgatgggaagctgcaaacggtg
gccgagaaggaagtgaagggagcagtctactctatggtggagttcaacggcaaacttctg
gccagtatcaacagcactgtgcgtctgtacgagtggacagctgagaaggagctgaggacg
gagtgcaatcactacaacaacatcatggcgctctacctgaagaccaagggtgacttcatc
ctagtgggtgacctcatgaggtccgtgctgctgctggcgtacaagcccatggaggggaac
tttgaggaaattgccagggacttcaacccgaactggatgagcgccattgagattttggac
gatgataacttcctaggggcggaaaatgccttcaacctctttgtgtgccagaaagacagt
gctgcaaccacagatgaggagcgtcagcatctgcaggaggttggggttttccacctcggg
gagtttgtcaacgtattctgccacggctccctggtcttgcagaacttgggcgagagctcc
acccccacccagggatccgtgttgtttggaaccgttaacggcatgattggcttggtcact
tctctgtcagagggctggtatagtctgctgatggacctgcaaaaccggctgaacaaggtt
attaagagcgttggcaagattgagcacagcttttggaggtccttccacacagagcggaag
accgagcaagccactggctttattgatggagacctgattgagagcttcctggacctgggc
cgggccaagatgcaggaagtggttagcaccctacagatcgatgacggcagtgggatgaaa
cgggaagctacggtagacgaggtcatcaagatcgtggaggaactgaccaggattcattag

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