Paramormyrops kingsleyae: 111848317
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Entry
111848317 CDS
T05788
Symbol
exosc1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
pki
Paramormyrops kingsleyae
Pathway
pki03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111848317 (exosc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pki03019
]
111848317 (exosc1)
Messenger RNA biogenesis [BR:
pki03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
111848317 (exosc1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
111848317 (exosc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
111848317
NCBI-ProteinID:
XP_023675976
Ensembl:
ENSPKIG00000016037
UniProt:
A0A3B3T6R3
LinkDB
All DBs
Position
Unknown
AA seq
194 aa
AA seq
DB search
MSPRKLCVPGEKLCSTEDCIPGTGTYLRHGYIFAALAGYVFRKNEGEELPVISVVKETEA
QLLPDVGAIVTCKVTSINPRFAKVHILYVGSTPLKDRFRGTIRKEDVRATEKDKVEIYKS
FRPGDIVLAKVISLGDVQSNYLLTTAENELGVVVAHSEAGVQMIPISWCEMQCPRTHGKE
FRKVARVQPEFLQA
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccgagaaagctatgtgttccaggtgaaaagctttgcagcacagaagactgtata
cccgggacaggcacttacttgcggcacggatacattttcgctgccctcgccggctatgtc
ttcaggaaaaacgagggcgaagagctgcctgtcatttcggttgttaaagaaacagaagct
cagctgctgccggatgtaggcgctattgttacgtgcaaggtcactagcatcaatccaagg
tttgcaaaagtccacatcctttacgttggttcaacgccactaaaagacagattcagagga
acaatcaggaaagaggatgtaagagcaacagaaaaagacaaggtagaaatatacaaaagc
ttccggcctggagatatcgtccttgcaaaagtgatctctttgggcgacgtccaatcaaac
tacctgctgaccacggcagagaacgagctgggtgtggtggtggcacacagtgaagcagga
gtacagatgatccccatcagctggtgtgagatgcagtgccccaggactcatggaaaggag
ttccggaaggtggccagggtgcagccagagttcctgcaggcgtga
DBGET
integrated database retrieval system