Paramormyrops kingsleyae: 111848707
Help
Entry
111848707 CDS
T05788
Symbol
abca1
Name
(RefSeq) ATP-binding cassette sub-family A member 1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
pki
Paramormyrops kingsleyae
Pathway
pki02010
ABC transporters
pki04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pki00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
111848707 (abca1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
111848707 (abca1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pki02000
]
111848707 (abca1)
Transporters [BR:
pki02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
111848707 (abca1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
Motif
Other DBs
NCBI-GeneID:
111848707
NCBI-ProteinID:
XP_023676680
Ensembl:
ENSPKIG00000023741
LinkDB
All DBs
Position
Unknown
AA seq
2297 aa
AA seq
DB search
MSISTQLGLLLWKNFTYRRRQTIQLLIEVIWPLFIFFILISVRIYYPPYQQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRHPTPGESPGVVGNFNQSIISRLFSDAKKILLYSQHDK
SLEGFKDLIQALKIMQSNTTGFKLKDFLRDNETLSSFLVHNASFSEYSVNEIVEADVNLE
KVLIKGFGVHLKDMCNKTALQNFVTIKDKNVSQLAQDIICKSSRSWLSQAERLFLSNLDF
LKPIRTDVKTDPHDVQQVSEATDYLLESLGALAVELASMKSWTDMRSEILYLTENANDSP
TQMYQAVSRIVCGHPEGGGLKIKSLNWYEDSNYKALFGNHNDSEEEPVSVYDNSSSPYCN
NLMKSMESSPISRMIWRALKPLLVGKILYTPDTPATQKIIKEVNRTFQDLGILRDLGGMW
EEIRPKVWSFMENSKEMNLVRTLLQNNASARFFNAQLQGTQWKVGDVFSFLAKHSEDTRP
PGTTYTWRDVFNETDQAVRAITRFMECVNLDKLEPVTNEERLVNKSMGLLDNRQFWAGIV
FPDIESNSSDLPANVNYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYVWGGFSYLQ
DVIEHSIIRVVTGIKEKTGVYIQQMPYPCYVDDVFLRVMSRSMPLFMTLAWMYSVAIIIK
GVVYEKEARLKETMRIMGLNNGILWFSWFISSLIPLLASSGLLVLALKMGNLLPYSDPGV
IFLFLGSFGVVTIMQCFLISTIFSRANLAAACGGIIYFTLYLPYVLCVAWEDYVGFGSKV
IASLLSPVAFGFGCEYFALFEEQGMGIQWDNLLSSPMEEDSYSLTTSITLMYIDSFLYGL
LTWYIEAVFPGQYGIPRPWYFPFTKSYWFGENTDKLAAELQGKHGNGEAVCMEEEPAHLK
PGVYIKKLVKVYSHGNKLAVDGLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGT
AYIMGKDIRSELSAIRRDLGVCPQHNVLFSMLTVEEHIWFYARLKGLSEEEVKAEMEQIV
SDLGLPHKRKSRTNQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLLLK
YRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKRDHDL
SLSSSYRNSSSTVSYIKKDDSVSESSSDAGLGSDQESETTTIGKLGLLTEHFSSRLHVGG
KSTDVNFLIISSDVSIISNVIFKHVPAARMVEDLGHELIYVLPYESAKDGAFVELFHELD
DRLFDLGISSYGVSDTTLEEIFLKVAEDSGVDTEIVSDGTVPVRRNRRHAFGDHQSCLRP
FTEDDGFDCNDSEGDPESRETDWLSGTHGKGSHQVKGWSLKRQQFVALLWKRLLYARRSR
KGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLAMQPWMYEEQFTFFSNDAPEDASTQSL
LNALTEHPGFGTRCMEGDPIPGVPCENVDDVWITPDVPSSVQEIFLYGNWSMENPSPSCE
CSCGSRKKMLPDCPPGAGGLPPPQIKLSQTDTLQNLTGRNVSDYLVKTYAQIIGKSLKNK
IGVNEFRYGGFSLGARSSQVLPPANDLKDAISRIRNTFSLRPGMAADRFLKSLSGFIQGL
DTKDNVKVWFNNKGWHSIGAFLNVINNGILRANLPPGTDPSKFGITAFNHPLNLTKEQLS
QVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQERVSKAKHMQFISGVQPFLYWLANFV
WDMCNYVVPATLVIIIFVCFQQKAYVSSTNLPALALLLLLYGWSITPLMYPASFFFKIPS
TAYVVLTSINILIGINGSVSTFVLELFGGSKFGGVNEILKNVFLIFPHFCLGRGLIDMVK
NQAMADALERFGESRFQSPLAWDMVGKNLFAMALEGVIFFFITVLIQYRFFIKARAWSPK
LNSLGEEDEDVARERQRILSGGGQSDILELRQLTKVYKRKQKPAVDRLCVGIPRRECFGL
LGVNGAGKTSTFKMLTGDSVVTSGEAFLAGKSVLTEIDEVHQNMGYCPQFDAINELLTGR
EHLEFYALLRGVPEKEVCEVAEWGIRKLGLVKYVDKKAGSYSGGNMRKLSTAIALIGGPP
VVFLDEPTTGMDPKARRALWNCILSVIKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRC
LGSVQHLKNRFGDGYTIILRVAGPKPNLDLVMKFIEGEFPGSTLKEKHRNMLQYQLPSSL
ISLSRIFSILSKHKERLQIEDYSVSQTTLDQVFVNFAKDQSDEDHSKDISVSSKDAVVDI
SQCNSFLQSEKVKESFV
NT seq
6894 nt
NT seq
+upstream
nt +downstream
nt
atgtccatctccactcagctgggcctgctgctctggaagaacttcacctacagacgacgg
caaacgatccagctgctgatcgaagtcatatggccgctctttatcttcttcatcctgatt
tccgtgaggatttactacccaccgtatcagcagcacgaatgccatttccccaacaaggcc
atgccctctgcgggcaccctgccctgggtccagggcataatttgcaatgccaataacccc
tgcttccgtcaccccacccctggagagtccccaggagtggttggaaacttcaaccagtct
attatttcgcgcctgttctccgatgccaagaagatcctgctatacagtcagcatgataag
agcctggagggatttaaagacctaatccaagccctgaagatcatgcagagcaacacgaca
ggcttcaagttgaaggacttcctccgtgacaatgagacgctctcctcgttcctggtccac
aatgcttcattttctgaatattctgtcaatgagattgtggaggctgatgtaaacttggaa
aaggtgctgattaagggcttcggtgtacacttaaaggacatgtgcaacaagactgctctc
cagaacttcgtgacaatcaaggacaagaacgtgtcacaactcgcccaggacatcatctgc
aaatcctcgcggtcctggctcagccaggctgagagactcttcctatccaacctagacttc
ctaaaacctatacggacggatgtgaagacggacccccatgacgttcagcaggtctcagag
gccacggattatcttctggagagcctaggtgcactggcagtagagctggccagcatgaag
agctggacggacatgcgcagcgagatcctgtacctgacggaaaacgccaacgactcgccc
acccagatgtaccaggcggtgtcgcgcatcgtctgcgggcacccagagggcgggggtcta
aagatcaagtccctcaactggtatgaggacagtaactacaaagcactgtttggcaaccac
aacgacagcgaggaggagccagtctccgtctatgacaactcctcatctccgtactgtaat
aacttgatgaagagtatggagtccagtcccatttctcgcatgatctggagagccttgaaa
cccctgctggtgggcaagatcctctacactcctgacactccggccactcagaagataatc
aaagaagtcaacaggacttttcaggatttagggatcctacgagacctgggtggtatgtgg
gaggagatcaggcccaaggtgtggagcttcatggaaaacagcaaagagatgaacctcgtc
cggaccctactccagaacaacgccagcgcccgcttcttcaacgcccagcttcagggcacg
cagtggaaagtgggagatgtgttcagctttctggccaagcattctgaagacacacgccct
cccgggacaacctatacctggagggacgtctttaatgagacagatcaggcggtgcgggcc
attacacgcttcatggagtgtgtcaacttagataagctggagccggtcaccaatgaggag
aggctggtgaacaagtcaatgggacttttggataacagacagttctgggcaggcatcgtt
ttcccagatatcgagtccaacagctcagaccttcctgccaatgtcaactataaaattcgc
atggatatagacaatgtggagcgaaccaacaagatcaaagacggatactgggatcctggt
cccagggctgacccatttgaggacctgcgctatgtgtggggtggattctcctacctccag
gacgtcatcgagcatagcatcattcgcgtggtcaccggtatcaaagagaaaacaggcgtc
tacatccagcaaatgccgtacccctgctatgtggatgacgtgttcctccgtgtgatgagc
cgttccatgccgctcttcatgacgctggcttggatgtactccgtggccatcataatcaag
ggtgtggtctacgaaaaggaggcccgcctcaaggaaaccatgaggatcatgggactgaat
aatggcatcctgtggttcagctggttcatcagtagcctgattcccctcctagccagttct
ggtcttctagttctcgctctcaagatgggaaacctcctgccctacagcgacccaggggtg
attttcctgttcctaggctcctttggcgtggttaccatcatgcagtgcttcctcatcagc
actatcttctctcgtgccaacttggcagctgcctgtggaggcatcatatactttaccctt
tatctcccttacgtgctttgtgtggcctgggaagattacgtgggctttggctccaaagtt
atagctagtcttctgtctcctgtggcattcggcttcggctgtgagtacttcgctctgttt
gaagagcagggcatgggtatccagtgggacaacttgctctccagccccatggaggaggac
agctacagcctcacaacttccatcactctcatgtacattgactccttcctttatggactc
ttgacctggtacattgaagccgtctttccaggccagtatgggataccccggccgtggtac
ttccccttcactaaatcctactggtttggagaaaatacagacaaactggcagctgaactg
cagggcaaacatggaaatggagaagctgtctgtatggaggaggaaccagcacaccttaaa
ccgggtgtatacatcaagaaactagtgaaggtgtatagccacgggaacaagctggctgtg
gatgggctgacccttggcttttacgagggtcagatcacttccttcctgggccacaacgga
gccggcaagaccaccacaatgtcaatcctaacaggcctcttcccaccaacatcggggacg
gcgtatatcatgggcaaggacatccgttctgagctgagtgcgatacggcgggacctaggc
gtgtgccctcaacacaacgttttattcagcatgctgaccgtggaggagcacatttggttc
tatgctcgcttgaagggcctctctgaggaagaggtgaaggctgagatggagcagattgtg
tcggaccttggcctgccacacaaacgcaagtccagaactaaccagctgtctggaggtatg
cagcggaagctttcagtggcactggcatttgttggcggatccaaagtcgtcattctggat
gagcctactgctggtgtagacccttacgcccgaaggggcatctgggacctgctgctgaag
tacaggcaaggccgcaccatcatcctctccacgcaccacatggatgaggccgacatcctc
ggggatcgcattgccatcatctcccatggcaagctgtgttgcgtgggctcctcgctcttc
ttgaagaaccagttaggcacgggctactacctgaccttggtcaagagagaccacgatctt
tcccttagtagctcttaccggaactcaagcagcactgtgtcctacatcaagaaggatgac
agtgtttccgagagcagttctgatgcaggcctcggcagtgaccaggagagtgaaaccacc
accattggtaaacttggtctgctaacagaacatttttcatctagacttcatgtgggtggt
aagagcactgacgtgaatttcttgattatctcttcagatgtctccatcatctccaacgtg
atcttcaaacacgtccctgctgcacgcatggtggaggacctgggtcatgagctcatctac
gtgctaccttatgagtcagccaaagacggagcctttgtagagcttttccatgagcttgat
gaccgcctctttgaccttggaatctccagttatggtgtctctgacaccaccctggaagag
atcttcctgaaagtggcagaagatagtggagtggacactgaaattgtatcagacggcact
gtcccagtgcgcagaaaccgcagacatgcctttggtgaccaccagagctgcctccgaccc
ttcactgaggatgacggctttgactgcaatgattctgagggagacccagaatcccgggag
acagattggctgagtggaacacatggcaaggggtcgcatcaagtcaagggctggagtttg
aagagacagcagtttgtggccttgttgtggaagcgattgctatatgctcggcgctcccga
aaaggcttttttgcccagatcgttctacccgctgtatttgtctgcatcgccctggtcttc
agcctcatcgtccctccctttggaaagtaccctagtctggccatgcagccatggatgtat
gaggaacagtttactttcttcagcaacgatgcccccgaagatgccagcacgcagtcgtta
ttaaatgccttgacagaacatcctgggtttggaactcgttgtatggaaggagaccccata
ccgggcgtcccatgtgagaatgtcgatgacgtctggatcactccagatgtcccaagcagt
gtgcaggagatcttcctttatgggaactggtccatggagaacccttccccttcgtgcgag
tgcagctgcggcagccggaagaagatgttgcctgactgtcctccaggagctggaggactt
ccacccccccagattaaactgagccaaactgataccttgcaaaatctgaccgggagaaat
gtgtcagactacctggtgaaaacttacgctcagatcattggaaaaagtttgaagaacaag
attggagttaatgaattcaggtacggtggattctccctgggtgccagaagttcccaagtt
ctccctccagctaatgacctgaaagatgcaatctcccgcatcaggaacaccttcagcctt
cgaccggggatggcagccgaccgcttcctgaaaagcttatcaggtttcatccagggcctg
gatacaaaggataacgtcaaggtttggttcaacaacaaaggctggcatagtattggagcc
tttctcaacgtgataaacaacggcatcctgcgggcaaacctccctccgggtacagatccc
agcaaatttggcatcacggccttcaaccaccccctgaacctcaccaaggagcagctctca
caagtggccctgatgaccacctcagtggatgtgctggtgtccatctgcgtgatcttcgcc
atgtcctttgtgccggccagctttgtggtcttcctcatccaggagcgtgtcagcaaagcc
aagcacatgcagttcatcagtggtgtgcagcccttcctgtactggctggctaacttcgtc
tgggatatgtgcaactatgtggtcccagccacgctggtcatcatcattttcgtctgcttc
caacaaaaagcctatgtctcctccaccaacctgcctgccctggccctcttgctgcttctc
tacgggtggtccatcacccccctgatgtaccctgcctcattcttcttcaagatccccagc
acagcctatgtggtgcttaccagcatcaacatcctaattggcatcaacggcagtgtgtct
acatttgtcttggagctctttggtggcagtaagttcggtggggtcaatgaaatcctgaag
aacgtgttcctgattttcccgcacttctgcctgggccgaggcctgattgacatggttaaa
aatcaagcgatggccgacgccctagagagattcggcgagagccgtttccagtctccattg
gcgtgggacatggtaggcaagaacctttttgctatggccctggagggtgtgatcttcttc
ttcatcaccgtgctcatccagtaccggttcttcattaaagccagggcatggagccccaaa
ctgaattctttaggtgaggaggatgaagatgtggccagggagaggcagagaatcctgagt
ggagggggccagtctgacatcctggagttgcgtcagctcacaaaggtatataagaggaag
cagaagcctgctgttgaccgtctgtgtgtgggcatcccacgcagagagtgtttcgggctg
cttggcgtaaacggtgcagggaagacaagtacgttcaagatgttgaccggagattcggtg
gtgactagcggagaggccttcctggccggaaagagcgtgctgaccgagatcgatgaggtg
caccagaacatgggctactgcccacagttcgacgccatcaatgagctgctgacaggccgg
gagcacctggagttctatgccctcctacgaggggtccctgaaaaagaagtgtgtgaggtg
gctgagtggggcatccgtaagctgggactggtgaagtatgtagacaagaaagcaggaagc
tatagtggagggaacatgcgtaagctgtccaccgccatagctctgatcgggggccctcct
gtggtgttcctggatgagcctaccaccggcatggaccccaaagcccgtcgggctctctgg
aactgcatcctcagtgttatcaaagagggccgttctgtcgtgctaacctcgcacagcatg
gaggagtgtgaggccctttgcacgaggatggccatcatggtgaacggcaggttccgctgt
ctgggcagcgtccagcacctgaagaaccggtttggagacggatacaccatcatcctgcgg
gtggcaggacccaagccaaatctggacttggtcatgaagttcatcgagggggagtttccg
ggcagcacgctgaaggagaagcacaggaacatgctgcagtaccagctgccgtcttccctc
atctccctgtcccgcatcttcagcatcttgtccaagcacaaggagcggctccaaatagag
gactactccgtgtcccaaaccacactagaccaggtgtttgtcaattttgccaaggaccaa
agtgacgaggaccactctaaggacatttccgtgagcagcaaagatgctgtggtggacatt
tcacagtgcaactccttcctgcaaagtgagaaggtgaaggagagctttgtttaa
DBGET
integrated database retrieval system
