Paramormyrops kingsleyae: 111848830
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Entry
111848830 CDS
T05788
Symbol
prkn
Name
(RefSeq) E3 ubiquitin-protein ligase parkin isoform X1
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
pki
Paramormyrops kingsleyae
Pathway
pki04120
Ubiquitin mediated proteolysis
pki04137
Mitophagy - animal
pki04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111848830 (prkn)
04120 Ubiquitin mediated proteolysis
111848830 (prkn)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
111848830 (prkn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pki04131
]
111848830 (prkn)
04121 Ubiquitin system [BR:
pki04121
]
111848830 (prkn)
03029 Mitochondrial biogenesis [BR:
pki03029
]
111848830 (prkn)
Enzymes [BR:
pki01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
111848830 (prkn)
Membrane trafficking [BR:
pki04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
111848830 (prkn)
Aggrephagy
Other aggrephagy associated proteins
111848830 (prkn)
Xenophagy
Other xenophagy associated proteins
111848830 (prkn)
Ubiquitin system [BR:
pki04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
111848830 (prkn)
Mitochondrial biogenesis [BR:
pki03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
111848830 (prkn)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_14
zf-RING_12
ubiquitin
IBR
Rad60-SLD
ADAMTS_CR_3
Rad60-SLD_2
Motif
Other DBs
NCBI-GeneID:
111848830
NCBI-ProteinID:
XP_023676927
Ensembl:
ENSPKIG00000002825
LinkDB
All DBs
Position
Unknown
AA seq
457 aa
AA seq
DB search
MIVFVKFNSSDGFPVELAESARVVQLKEAVGQECGVLPQQLRVIFAGRELHNDCTLQSYD
LPEQSTVHVVLPTSGPARRREVFLQSQLRGTADSLTRLDLSEARLPTACTGLASILRTEN
GGEAGSAPFPESRPHCSFYVFCKSPCGAIRPGKLRVRCRTCLQGTLTLSRGPSCWDDVLL
PNRIHGVCQSQDCDGRMAEFYLKCATHPTAADDTSVALDLITPNVRGIPCIACTDILSPV
LVSPCPDRHVICLDCFRIYCVTRLNERQFVHHPEVGYSLPCPAGCPDCLIKEVHHFRVLG
EEQYERYQLYATEECLLQMGGVLCPTPGCGAGLLPEEGQRRVQCDPGRELGCGFVFCREC
KDSFHEGECQTRHPAEAGVALQGYIVDEDAAQRARWEQASQKTIGETTRPCPRCRVPVEK
SGGCMHMVCPQAQCKFEWCWLCQVEWNRDCMGSHWFG
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgatagtgtttgtgaagtttaactccagtgacgggttcccggtggagctggctgagagt
gcgagggtggtccagctgaaggaggcggtgggtcaggagtgtggcgtcctaccccaacaa
ctgcgggtcatcttcgcgggccgggagctacataacgactgcaccctccagagctatgac
ctcccggagcagagcacggtccacgtggtgctgcccacgtccggcccagcccgtcggcgc
gaggtcttcttgcagagtcagctgaggggcactgcagacagcctgacccgtctggacctg
agtgaggcccggctgcccacagcctgcaccgggctggccagcatcctgaggacagagaat
ggcggagaggcgggttcagcccccttcccagagtccaggccacactgcagcttttatgtg
ttctgcaagagcccatgtggagccatcaggcccgggaagctgcgggtacggtgtcggacc
tgcctgcaggggacgctgacgctgagccggggtccttcctgttgggacgatgttctcctc
ccgaacagaatacacggtgtatgtcagtcccaggactgtgacggccgaatggcggagttc
tacctgaagtgtgccacccaccccactgctgctgatgacacatctgtggccctggacctc
attacgcccaacgtccggggtatcccctgcatcgcctgcactgacatcttgagcccagtg
ctggtgtcaccatgtcctgaccgccatgtcatctgtctggactgcttccgcatctactgc
gtcactcggctcaacgagaggcagtttgtgcaccaccctgaggtcggatattccctgccc
tgcccggcaggttgtccagactgtctaattaaggaggtccatcacttccgggtccttggt
gaagagcagtatgagcggtaccagctctatgccacggaggaatgtctgctgcaaatgggt
ggagtcctgtgccccactccaggctgtggggcaggacttcttcctgaggagggccagagg
cgggttcagtgtgacccgggccgcgagcttggatgcgggtttgtcttctgccgtgaatgc
aaggacagcttccatgaaggcgagtgccagaccaggcatccggcagaggcgggtgtagca
ctccagggctacatcgtggatgaggacgcagcacagcgtgcccgctgggagcaggcgtcc
cagaagaccataggggagacaacccgtccatgtccacgctgccgcgtccccgtggagaag
agcggaggctgcatgcacatggtgtgcccccaagcccagtgcaagtttgaatggtgctgg
ctgtgccaagtggagtggaaccgggactgcatgggcagccactggttcggctga
DBGET
integrated database retrieval system
