Paramormyrops kingsleyae: 111849207
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Entry
111849207 CDS
T05788
Symbol
xab2
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
pki
Paramormyrops kingsleyae
Pathway
pki03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pki00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111849207 (xab2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pki03019
]
111849207 (xab2)
03041 Spliceosome [BR:
pki03041
]
111849207 (xab2)
Messenger RNA biogenesis [BR:
pki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
111849207 (xab2)
Spliceosome [BR:
pki03041
]
Complex B
Other components
Prp19-related factors
111849207 (xab2)
Complex C
111849207 (xab2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
Suf
TPR_12
TPR_2
TPR_8
TPR_15
ARM_TT21_C
ARM_TT21
TPR_1
RPN7
NRDE-2
LTN1_E3_ligase_6th
Motif
Other DBs
NCBI-GeneID:
111849207
NCBI-ProteinID:
XP_023677666
Ensembl:
ENSPKIG00000014874
UniProt:
A0A3B3T087
LinkDB
All DBs
Position
Unknown
AA seq
850 aa
AA seq
DB search
MLSSSGKSDVIFEEDDLPYEEEIIRNPYSVKCWMRYIEHKQNGAKSVLNLIYERALKELP
GSYKLWYNYLRERRKQVKGKCITEPVYEEVNNCHERALVFMHKMPRIWLDYCQFLVLQCK
ITRSRRTFDRALRALPITQHARVWPLYLQFARNLPLPETAIRIYRRYLKLSPENAEEYID
YLRSIGRLDESAIRLGAIVNDESFVSKEGKSNYQLWHELCDLMSQNPDKVKSLNVGAIIR
GGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIQTVVTVRDFTQVFDSYAQFEES
MIAANMETTSEMGSSDDDDIDLELRLARFETLITRRPLLLNSVLLRQNPHNVHEWHKRVK
LYEGKPHQIINTYTEAVQTVDPMKATGKPHSLWVAFARFYEENEQLDDTRTIFEKATKVN
FKQVDDLASVWCEYGEMELRHENYDQALRILRKATAIPSRKAEYFDSTEPVQNRVYKSLK
VWSMLADLEESLGTFQSTKAVYDRIIDLRISTPQIIINYAMFLEEHSYFEDSFKAYERGI
ALFRWPNVYDIWNTYLTKFIDRYGGKKLERARDLFEQALDGCPPKYAKTIYLLYAKLEEE
YGLARHAMAVYERATRAVETFEQHHMFNIYIKRAAEIYGVTHTRTIYQKAIEVLPDEHAR
EMCLRFADMESKLGEIDRARAIYSYCSQICDPRMTPTFWQTWKDFEIRHGNEDTIREMLR
IKRSVQATYNTQVNFMSSQMLKATANATGTVSDLAPGQSGVDDMKMLEQKALQLAAEAEQ
DKPKPKDKILFVRSDTSRSELAELAKQANPDEIDIDDEDEDGGEEGDEPDEVQLEQKTVP
TAVFGGLKED
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcttcaagtggcaaatcggacgttatttttgaggaagatgaccttccgtacgag
gaggagatcattcgcaatccctactcggtgaagtgctggatgcgctacattgaacacaag
cagaacggcgccaaatcggtcctgaatttgatctacgagcgggcgttgaaggagctgccc
ggcagctataaactgtggtataattatctgagggagaggaggaagcaggtgaagggaaag
tgcatcaccgagcctgtatacgaggaggtcaacaactgtcatgagagagcgctggtcttc
atgcacaagatgccccgtatctggctggactactgccagttcttggtgctgcagtgtaaa
atcacgcgcagtcgccgtacattcgaccgtgccctgcgggctcttcccatcacgcagcac
gcccgcgtgtggcccctctacctccagtttgcccgcaacctccccctgcccgaaacagcc
atccgcatctaccgccgctacctcaagctctccccggagaatgcggaggagtatatcgac
tacctgcggtccataggtcggctcgatgagtcggccatcaggctgggggccatcgtcaac
gacgagagcttcgtctccaaggagggcaagtccaactaccagctgtggcatgagctttgc
gacctcatgtcccagaaccccgacaaggtgaagtccctgaacgtgggggccatcattcgg
ggcggcctcacccgcttcaccgaccagctgggcaaactctggtgctccctggcagactat
tacatccgcagcgggcacttcgagaaggcccgcgacgtgtacgaggaggccatccagact
gtggtcaccgtgagggacttcacccaggttttcgacagctacgcgcagtttgaggagagc
atgatcgcagccaacatggagaccacctcggagatgggctccagtgacgatgatgacata
gacctggagctgcggctggcgcgctttgagacgctcatcacacggcgccccctgttgctg
aacagcgtgctgttgcggcagaatccccacaacgtgcacgagtggcacaagagggtgaag
ctgtacgaggggaagccacaccagatcatcaacacgtacacggaggccgtgcagaccgtg
gaccccatgaaggccacggggaagccccattccctctgggtcgcctttgccaggttctac
gaggagaatgagcagctggatgatacacggacgatcttcgagaaggccaccaaggtgaac
ttcaagcaggtggacgacctggcgagcgtgtggtgcgagtacggggagatggagttgcgg
cacgagaactacgaccaggcgctgaggatcctgaggaaagccactgccatcccgtcgaga
aaggcggagtacttcgactccacagagccggtccagaaccgcgtctacaagtccctgaag
gtgtggtccatgctggctgacctggaggagagtctgggcacctttcagtccacaaaggcg
gtgtacgaccgcatcatcgatctacgcatcagcacgccccagatcatcatcaactacgcc
atgttcctcgaggaacacagctattttgaggacagcttcaaggcctacgagcggggcatc
gccctcttccgctggcccaacgtgtacgacatctggaacacctacctcaccaagttcatt
gaccgctacggcggtaagaagctggagagggcgagagacctgttcgagcaggccctggac
ggctgcccgcccaaatatgccaagacgatctacctgctgtacgccaagctggaggaggag
tacgggctggcgcggcacgccatggccgtgtacgagagagccacgcgggccgtggagacg
ttcgagcagcaccacatgttcaacatctacatcaagcgcgcggccgagatctatggggtg
acgcacaccaggaccatctaccagaaagccatcgaggtcctgcccgacgagcacgccaga
gaaatgtgcctccgattcgccgacatggagagcaagctgggcgagattgaccgtgccagg
gccatctactcctactgctcgcagatctgcgacccgcggatgacgcccacgttctggcag
acgtggaaggacttcgagatcaggcacgggaatgaggacacaatccgggagatgctgagg
atcaagcgcagtgtccaggccacgtacaacacccaggtcaacttcatgtcctcccagatg
ctcaaggctaccgccaatgccacagggacagtgtcggacctcgcccccgggcagagtggt
gtggacgacatgaagatgctggagcagaaggccctgcagctggcggccgaggctgagcag
gacaagcccaaacccaaagacaaaatcctctttgtcagaagcgacacatcgcggagtgag
ctggcggaactcgccaaacaagctaaccccgacgaaattgacatcgacgatgaggatgag
gacggaggcgaggaaggtgacgagccagacgaagttcagctggagcagaagactgtgccc
accgctgtgttcggcggactcaaggaggactga
DBGET
integrated database retrieval system
