Paramormyrops kingsleyae: 111851148
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Entry
111851148 CDS
T05788
Symbol
smarcc1
Name
(RefSeq) SWI/SNF complex subunit SMARCC1 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pki
Paramormyrops kingsleyae
Pathway
pki03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pki00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111851148 (smarcc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pki03021
]
111851148 (smarcc1)
03036 Chromosome and associated proteins [BR:
pki03036
]
111851148 (smarcc1)
Transcription machinery [BR:
pki03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111851148 (smarcc1)
Chromosome and associated proteins [BR:
pki03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
111851148 (smarcc1)
PBAF complex
111851148 (smarcc1)
GBAF(ncBAF) complex
111851148 (smarcc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
HEAT_GCN1
Chromo
Motif
Other DBs
NCBI-GeneID:
111851148
NCBI-ProteinID:
XP_023681547
Ensembl:
ENSPKIG00000021693
LinkDB
All DBs
Position
Unknown
AA seq
1087 aa
AA seq
DB search
MATAATAAGTAGSGGPAVGQGGGGSSSSLSVGRKKDGGPSAKFWESGETVSQLESVRLWI
GKHYKKYVQTDSPSSKSLAGLVVQLLQFQEDAFGRRVNNPALTKLPAKSFLDFKPGGALC
HILGSVYKFKSEQGWRRFDLQNPSRMDRNVEMFMNVEKTLVQNNCLTRPIVFLVPDMEQK
LAAKLKDIVKRHQGSVTEDKSKATHHIYPSPPQQEEEEWLRPVMRKDKQVLVHWGMYPDS
YDTWVSASDVEGDVEDPPSPDKPWKIHAKWILDMDAFNEWMNEEDYEVDENRKPVSYRQR
IFPREEESSRTPDRKERKAAVAKKRRRSPSPPAESRKKGGKKGNSGPYWKRRGHREEEEP
EEDLTKDLEEPTPVPNMEEVTLPKNVNPKRDSENTPVKGGTVADLDDQEDDSMVSGGKDE
DEGKTEVNRLLDHGEDNVTEQTHHIIIPSYAAWFDYNCIHEIERRALPEFFNGKNKSKSP
EIYLAYRNFMIDTYRLNPQEYLTSTSCRRNLTGDVCAIMRVHAFLEQWGLINYQVDADSR
PLPMGPPPTPHFNVLADTPSGLMPLHHRPPQLPAAQQMLSFPEKFKDKPIDLQNFGLRTD
VYAKKNPKSKGASAGREWTEQETLLLLEGLEMYKDDWNKVSEHVGSRTQDECILHFLRLP
IEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVAAAAARAALEEFSRV
REEVPTELVEAHVKKVRDAARSTGKLDPAFGLESSGIAGTAPDEPEKTESSDPEKMETDS
ESQPADKAEAEKPAESAEGERTKNEAPEPPADPEEENEGGEEGESERTEEGKASVGTLDK
DKEETMDTSEDPKEAEEEENQKKLVHDVGEGNIATAAAAALASAATKAKHLAAVEERKIK
SLVALLVETQMKKLEIKLRHFEELETIMDREKEALELQRQQLLTERQAFHMEQLRYAEMK
ARQQHEQQGIAHNHGGPPGPAMPPGPPPGMHGHPAPGYHSMHHPMGPHHPMQTAGPMGVP
GQGMPGRMMPGPPPSAPPQPGMPPMMVPRHPAAPNGMYPAPPPSQPDGMPPGPVGPPVGS
ASRPVEN
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcggcgactgcagcgggaacagcgggttcgggaggaccagcagtcggccag
gggggtggcggcagtagtagcagtctctcggtcggcagaaagaaagatggcggcccctcc
gcgaagttctgggaaagcggagagacggtctctcagctggagtcggttcgcctgtggata
gggaaacactataagaagtacgtacagacagactctccatccagcaagtccctggctggc
ctggttgtgcagctgctacagttccaagaagatgcctttggccggagggtcaacaatccc
gccctcaccaagctgcctgcaaagagcttcctggatttcaagccagggggcgccctgtgc
cacattctgggttctgtttacaaattcaagagcgaacagggatggcgacgcttcgacctg
cagaacccgtccaggatggaccggaacgtagagatgttcatgaacgtggagaagacgctt
gtgcagaataactgcttgacacggcccattgtgttcctggtaccggacatggagcagaag
ctggctgccaagctaaaggacattgttaagagacaccagggctctgtcactgaagataag
tccaaggccacccatcacatctacccatcgcctcctcagcaggaggaagaggagtggctg
cgtcccgttatgaggaaggacaagcaagtgctggtgcactggggcatgtaccctgacagc
tatgacacatgggtgtcagccagtgatgtggagggtgatgtagaagatccacccagccca
gacaagccctggaagatccatgccaagtggattctggacatggacgcttttaatgagtgg
atgaatgaagaggactacgaggtggatgagaaccggaagcctgtgagttaccgtcagcgc
atctttccacgggaggaagagtcttcccgtacacctgatcgcaaggagcgcaaagccgcc
gtagctaagaagaggaggcgttccccgtccccccccgccgagtcccgcaagaaggggggc
aagaagggaaactcggggccgtactggaagaggcgtggccatcgcgaagaggaagagcca
gaggaagacctcacaaaggacctggaggagcctactccagtccccaacatggaggaggtc
accctccccaaaaacgtgaaccccaagagggacagtgagaacactccagtgaagggcggc
acagtggcagacctggacgaccaggaagatgattctatggtttccgggggcaaggatgag
gatgagggcaagacggaggtgaatcgcttgctggaccatggggaagacaacgtgacagag
caaactcaccatattatcatccccagctacgctgcctggttcgactacaactgtatccat
gaaattgagaggagggccctcccagagttcttcaacggcaagaacaaatccaaatctcca
gagatatacctggcctataggaacttcatgatagacacataccgcctcaaccctcaggag
tacctcacctctacctcctgccgccggaacctcacgggggacgtctgtgccatcatgagg
gtgcacgcctttctggagcagtgggggctgattaactaccaggtggatgcagacagccgg
cctctgccaatggggcccccgcccaccccccacttcaacgtactggcagatactccttca
ggcctgatgccattgcatcaccgcccccctcagttgccagctgctcagcagatgctcagc
tttcctgagaagttcaaggacaagcccattgacctgcaaaactttggccttcgtacagat
gtctatgcaaagaagaaccccaagagtaaaggagccagtgcgggcagggagtggactgaa
caggaaaccctcttgctgctggagggcctggagatgtacaaggacgactggaacaaggtg
tcggagcacgtgggcagccgcacgcaggacgagtgcatcctgcacttcctgcggctgccc
atcgaggacccgtacctggagaactcggacgcctctctcgggccgctggcctaccagccc
gtgcccttcagccagtcggggaaccccgtcatgagcacggtggccttcttggcgtccgtg
gtggatccccgcgtggcggccgctgcagccagggccgccttagaggagttctcccgtgtg
cgggaagaagtgccgactgagctggtggaagctcacgtgaagaaggtgcgagatgccgcc
cgcagcacggggaagctggaccccgccttcggcctggagagcagcggcatcgctggcacg
gcgccggacgagccggagaagaccgagtcttctgaccctgagaagatggaaacagactct
gaatctcagccagctgacaaggccgaggcagagaaaccggcggaatctgcagagggagaa
aggacgaagaatgaggcaccggagccaccagctgacccggaggaagaaaatgaaggagga
gaggagggagagagtgagagaacggaggaaggcaaggcttcggttggcactttagataaa
gataaggaagagaccatggacacgtcagaagaccccaaggaggcggaagaagaggaaaac
cagaagaagttggtgcatgatgtcggagaggggaacatcgccactgcagcagctgcagct
ctggcctccgcggccaccaaggccaagcatttggctgcggtggaggagagaaagatcaag
tctctggtcgccctgctggtggagacacaaatgaagaaactggagatcaagctgaggcac
tttgaagagctggagaccatcatggacagagaaaaggaagcgctggagctgcagagacag
cagctcctgactgagcgccaggccttccacatggagcagctccggtacgcggagatgaag
gcgcgccagcagcacgagcagcagggcattgcccacaaccatggcggcccccctggccct
gccatgccccccgggcccccacctggcatgcatgggcatccggccccaggataccactcc
atgcatcatcccatgggcccccaccaccccatgcagacagcaggtcctatgggggtgcca
ggtcaaggcatgccaggccgcatgatgcccgggcctccccccagtgcccctccccagccc
ggcatgccccctatgatggtgccaaggcaccctgcagcccccaatggcatgtatccggcc
ccgcccccctcccagcccgatgggatgcccccaggccccgtgggaccaccagtgggttct
gcttcccgcccagttgagaactaa
DBGET
integrated database retrieval system
