Paramormyrops kingsleyae: 111852289
Help
Entry
111852289 CDS
T05788
Name
(RefSeq) collagen alpha-1(XIV) chain-like isoform X1
KO
K08133
collagen type XIV alpha
Organism
pki
Paramormyrops kingsleyae
Brite
KEGG Orthology (KO) [BR:
pki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pki00535
]
111852289
Proteoglycans [BR:
pki00535
]
Extracellular matrix (ECM) proteoglycans
Others
111852289
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Fn3_Dep-1_2nd
Fn3_nematode
VWA_3
Motif
Other DBs
NCBI-GeneID:
111852289
NCBI-ProteinID:
XP_023683799
LinkDB
All DBs
Position
Unknown
AA seq
1851 aa
AA seq
DB search
MRVHCCLLLFLAHIVLLIAPAQGQVSPPRKLRYTLLSFDKLLVSWKEPRGDFDGYMFVYN
AHPDGKVTESQLPKAENKVVIDNFNGGLEYRIKVFAMRGNQRSKPLQGTFTAQDVRPDDG
VEPQGLKVASVVEETNRITEGDQFQCKTPSVADIVILVDGSWSIGRLNFRLVRTFLESLV
SAFNVGFDKTRIGLAQYSGDPRIEWHLNAYSTKDAVIDAARNLPYKGGNTLTGLALTYIL
ENSFKPESGARPGIPKIGILITDGKSQDDVIPPAHSLREAGIELFAIGVKNADENELKAI
ASPPEDTHVYNVADFSMMSTIVESLTKTLCQRVEQQDKQITGEPTGQVTLASPQDLRTSE
VTARSFRVSWSHPPGTVEKYRVVYYPTKGGSPDEAVVDGSENSVVLQYLNSQTEYQIAVF
AIYVNAASEGLRGSETTLTLPMVNDLTLYDVTHNSLRARWKGISGATGYMILYAPLSDSG
LADEKEVKVEETVTDIELEKLTPATEYTVTVYAMYGEEASDPMTHQETTLPIMAPRDLQI
SNVDHSSARLTWEATSKKVLGYRILYVKTSDVQTTEVDVDQVTTLQLRNLTSNTEYTVAI
FALYEDAQAEPLTKSFTTRPVPAPSGLRTSDVTTDSFRVSWKATASDVLLYKLSWWPHDE
SLKEERIVNGMTAVLTNLRPVTEYVVSLSAIFLDGTESTPVTTLTTTLARTTTIATTTSV
VRQGVRNLRLDEETTFSLQVSWELQDPNVRQYRVTYVSARGDRAEEVLMVPGRQNSVLLQ
PLLSDTEYKVSVTPVYASTDGISVSRVGRTLPLMAPKNLRVSEEWYNRFRISWDTPPSPT
MGYRVVYQPISTPGRALETFVGEDVNNMLILNLLSGTEYSVKVISTYTTGSSDALAGKAK
TLFLGVTNLNTYQVRMKSTCAQWQPHRHASRYRVVIESLLNGQKQEVSLSGGATRHCFHN
LHPDTQYKISIYSQLPDLEGPAVTLIDRTLPVPPQPTTAAPTTTPLPTIPPAKEVCKAAK
ADLVFLVDGSWSIGDDNFQKIIRFLYSTTGALDKIGPDGTQVAIAQFSDDARTEFKLDAY
DNKETLLAAIQSISYKGGNTKTGRAIKHVKDSIFTPEGGMRRGIPKVLVVLTDGRSQDDV
SMVSKEMQMEGYVVFAIGFADADYGELVSIASKPSERHVFFVDDLDAFKKIEEKLVTFVC
EAASATCPSVRMKGGTMAGFQMMGMFGLTENQYASVEGVSMEPGTFNSFPCYRLHKDALI
SQPTRFLHPEGLPSDYTITVLFRLLSDTPQEPFALWEILNQANEPLVGVILDNGGKTLTF
FNYDYKGDFQTVTFEGPEIRKIFHGSFHKLHVAVSKVTAKAFVDCKLVGEKSISAAGNIS
TDGVEVLGRMVRSRGSRDNSAPFQLQMFDIICSSSWASRDQCCELPGLRDEEQCPALPHA
CTCSQDSKGPAGPAGPPGGPGARGARGDRGEPGLVGPQGLVGDIGPPGPQGLPGPQGPSG
MSIQGAPGAAGEKGERGDVGSPGPQGVPGPPSSPGRDGPAGQRGLPGKDGPPGPPGSTGT
IGPPGGPGQPGSNGPPGPLGDQGLPGSPGVRGEKGERGDAQSQAAVQAIARQVCEQLIQS
HMSRYNSLLNHIPSQPVSVRTIPGPPGEPGRQGSPGPQGEQGPPGRPGFPGNNGENGQPG
ERGLSGEKGERGSPGVGIQGPRGPQGPPGPTGEGRTGSQGPLGRPGNPGTPGRPGIPGPT
GPAGPPGYCDQNSCLGYNVGVQLAPEPYQPYDNEEDPYEGYRGYPHEYYQPNYPAPRPVE
PESEPFPTEDTVEVRSPGMHRFSRSLSGKKVPAAAMRRRAKREDWKLPMPN
NT seq
5556 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtgcactgctgtctactgctctttctggctcacattgtgttacttatcgcccct
gctcagggtcaagtttcacctccgcggaaattgcgctatacactgctgagttttgacaaa
ttgctggtatcgtggaaggaaccacgaggagatttcgacggctatatgtttgtttataat
gcgcacccagatggcaaagtaacagagtcacagctgcccaaggcagagaacaaagttgtc
atagacaatttcaatggcggtttggagtacaggatcaaggtgttcgccatgagaggaaac
cagaggagtaaaccactgcaaggtacattcacagcacaagatgtgcgtccggatgatggt
gttgagccccagggactaaaggtggccagtgtggttgaggaaaccaacaggatcacagaa
ggggaccagttccagtgtaagaccccatctgtggccgacatcgtcatcctggtcgatggt
tcctggagcattggcaggttgaacttccgcctggtgcgaacattcctggagagcttggtg
agcgccttcaatgtgggctttgacaagacacgcataggactggcccaatacagcggggat
ccccggattgagtggcacctgaatgcctacagcaccaaggatgccgtgatcgatgctgcg
aggaacctgccgtacaaaggcgggaacacactgaccggtcttgctctgacttacattttg
gagaacagcttcaagccggagtcaggggccaggccaggcattcccaaaatcggcatcctg
atcaccgatgggaagtctcaggatgatgtcatccctccagcccacagccttcgagaggcg
ggcattgagcttttcgccattggcgtcaagaatgcagatgagaatgagctgaaggccatc
gcctcgcctcccgaggacacgcacgtctacaacgtggccgacttcagcatgatgagcacc
attgtggagagcctcaccaagaccctgtgccagagggtggagcagcaggacaagcagata
acaggagagccaacggggcaggtgaccctagcgtccccccaggatttgcggacgtctgag
gtgacggccaggagctttcgggtgtcctggagccacccccccgggactgtggagaaatac
cgcgtggtgtactaccccaccaagggggggtctccagacgaggccgtggtggacggcagc
gagaactccgtggtgctgcagtacctgaactctcagacggagtaccagatcgccgtattc
gcgatctatgtcaatgccgcaagcgaaggcctgcgtggcagcgagacgaccttgaccctg
ccgatggtgaacgacctgacgctctacgatgtgacccacaacagcctccgcgctcgttgg
aagggcatcagtggtgccactggctacatgatcctgtacgccccactgagcgattccgga
ctagctgatgagaaggaggtgaaggtggaggagactgtcacggatatcgagctggagaag
ctgactcctgccaccgaatacaccgtgactgtgtacgccatgtacggggaggaggccagc
gaccccatgactcaccaggagaccacgttgcccatcatggcacctcgtgacctccagata
tccaacgttgaccacagctctgccagactgacgtgggaggccacatcgaagaaggtcctg
ggctaccgcatcctgtatgtgaagaccagtgatgttcagaccactgaggtggatgtggac
caggtcaccacactgcagctgaggaacctgacttcgaacactgagtacacagtggccatc
ttcgctctctatgaggacgcccaggcggaaccccttaccaagagcttcacgaccaggccc
gttcccgccccgagcggcctccggaccagcgatgtgacgacagacagcttccgggtcagc
tggaaggccactgcttcagatgttctgctatacaagctgtcttggtggccccatgatgaa
tcgctgaaggaggagaggattgtgaatggaatgacagccgtgttgaccaatttacggcca
gtcacagagtacgtggtctccctgtcagccatcttcctagatgggacagagagtacacca
gtcactaccctgaccacgacattggcaagaacgacaactattgcaacgacgacatcagtg
gtacgacagggcgtgagaaaccttcgcctggatgaggagaccaccttcagcttgcaggtg
tcctgggagctccaagaccccaacgtgcgacagtaccgtgtgacctatgtcagtgccaga
ggcgaccgagctgaggaagtgctcatggtccccggccgacagaacagtgtcctgctgcag
cctctgctctccgacactgaatacaaagtgagcgtgaccccagtctacgccagtactgat
gggatcagtgtgtcccgcgtgggccggaccttaccgctcatggcacccaagaacctgagg
gtctcggaggagtggtacaaccgcttccgcatcagctgggacacacctccatcaccgacc
atgggctacagggtggtctaccagcccatttccactccaggacgagccctggagacattt
gtgggggaggatgtgaacaacatgctgatcctgaacctgctgagtgggacggagtacagt
gtgaaggtcatctccacctacaccacaggctccagcgacgccctggctggaaaggccaag
acgttgttcctgggtgtgaccaacctgaacacctaccaggttcggatgaagagcacatgt
gcgcagtggcagccccatcgccacgccagccgctaccgcgtcgtcatcgagtccctgctg
aacggacagaagcaggaagtgagtctgtctgggggggcgaccaggcactgcttccacaac
ctacacccagacacccagtataagatcagcatctactcccagctcccagacctggagggg
ccggccgtcaccctcatcgacaggaccttgcctgtccccccccagccgactaccgcggcc
ccgacgaccacgccccttcccacaatccctcctgctaaagaagtctgcaaagcagccaag
gctgacctggtcttcttagtggatggctcctggagcatcggggatgacaacttccagaaa
atcatccgcttcctgtacagcacgaccggcgccctggacaagatcggccccgacggcact
caggtggccatcgctcagttcagtgacgacgccaggacagaattcaagctcgatgcctat
gataacaaggagacattgttggctgccattcagagcatctcatacaagggaggaaatacc
aagacaggtcgggccataaagcatgtgaaggactccatcttcacccccgaggggggaatg
aggagggggatccccaaagtgctggtggtgcttaccgacggccgctcccaagatgatgtc
agcatggtgtccaaggagatgcagatggagggctacgtcgttttcgccatcggcttcgcg
gatgccgactacggggagctggtgagcattgccagcaagcccagtgaacgacatgtcttc
tttgtggacgacctggatgccttcaagaagattgaggaaaagctggtgacgtttgtgtgt
gaagctgcctcagccacttgtccatctgtacggatgaaaggcggcaccatggcaggcttc
cagatgatgggcatgtttggactgacagagaaccagtacgcgagtgtcgaaggagtttcc
atggagcctggaaccttcaacagcttcccatgctatcggctgcacaaagacgccctcatc
agccaaccaacaaggtttcttcaccctgaaggcttgccctccgattacaccatcacagta
ctgttccgcctgttgtccgacactccccaggagccctttgcattgtgggagatcctcaac
caggccaatgagcctctggttggggtcatactggacaatggtgggaaaaccctcacgttt
ttcaactatgactataaaggagactttcagactgtgacatttgagggtccagagatcaga
aagatcttccatggcagctttcacaagctccacgtggccgtcagcaaggtcaccgccaaa
gcgttcgtcgactgtaagctggtgggagagaagtccatcagcgcagcaggaaacatcagc
acggatggggtggaggtgctgggcaggatggtccggtcccggggtagcagagacaactcg
gcaccctttcagctccaaatgttcgacatcatctgcagttcttcgtgggctagcagggac
cagtgctgtgagcttccaggtctcagagatgaggaacagtgtccagccctgcctcacgcc
tgcacatgttcccaggacagtaaaggtcccgcaggacccgcaggacccccgggaggtcca
ggggccagaggtgctagaggagaccgaggggaaccagggctggtgggtccacagggtcta
gtaggtgacattggaccaccaggtcctcagggacttccgggaccccagggcccaagtggc
atgtctatccagggggcaccgggcgctgcgggggagaagggcgagaggggagatgtcggt
tctccggggccacagggggtaccgggaccaccaagctcacctgggcgggatggaccagcg
ggacaaaggggactacctggaaaagatggtccccccggaccccctggctccacaggaacc
attggaccacctggaggtcctggacagcctggatcaaacggacctcctggacctctggga
gatcagggactacctggctctcctggagtccggggagagaagggtgaacggggagatgcg
cagtcacaggcagccgtgcaggccatcgcccggcaggtgtgcgagcagctcattcagagt
cacatgagccggtacaactccctcctgaaccacatccccagccaacccgtctccgtgcgc
accatcccggggcccccgggggagccagggcgccagggctccccggggccccaaggagag
cagggcccccccggccgacccgggttcccagggaacaacggggagaacgggcagccggga
gagagaggtttgtcaggagagaaaggcgaaagggggagtccaggggtgggaatccagggg
cccaggggcccccaagggcctccagggcccaccggagagggccgcaccggcagccagggt
ccccttggtcgccctggcaaccctggaacccctggccgaccgggcatccccggtcccact
ggtccggctggcccacctggttactgtgaccagaactcctgcctggggtacaacgtagga
gtacaattggctcctgagccctaccagccctatgataatgaggaggacccatatgagggg
tacagaggctacccccacgagtactaccagcccaactaccccgccccccgtcccgtggaa
cccgagtctgagccctttcccacagaggacactgtggaggtgagatctccaggcatgcat
cgcttctccaggagtctgtctgggaagaaggtccccgctgctgcaatgcggagaagagcg
aagagggaagactggaaattgccgatgcccaactga
DBGET
integrated database retrieval system
