Paramormyrops kingsleyae: 111852623
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Entry
111852623 CDS
T05788
Symbol
nrde2
Name
(RefSeq) protein NRDE2 homolog
KO
K26109
nuclear exosome regulator NRDE2
Organism
pki
Paramormyrops kingsleyae
Brite
KEGG Orthology (KO) [BR:
pki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pki03019
]
111852623 (nrde2)
Messenger RNA biogenesis [BR:
pki03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
111852623 (nrde2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NRDE-2
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
TPR_14
Motif
Other DBs
NCBI-GeneID:
111852623
NCBI-ProteinID:
XP_023684514
Ensembl:
ENSPKIG00000009331
LinkDB
All DBs
Position
Unknown
AA seq
1140 aa
AA seq
DB search
MALFPAFADVSNRNPSNENSSKDLDWLSNQSFRPHDALVLHQKALEQTTSEGQEVSQDGS
LGPEWKDDVRSKRKKKKEKKKKRKKKRGSSGEDSGGSGYESDTVYPSDLLKQAKDAERQE
DQTLSQGSFMWLDDLPAPSDRPFCIDKKANAGNWQYKSLYRGDIARYRRKGSSCLGLDSK
TQAVSWAETKPTNAKRVLRTAERYFCSVSRQQLSAAGRPELPGSRGSGPSLAAVRFIPVP
PVLEEEGSMRTTMGPTWVNPLGVYDSSTSLWLQGKGLPESEGQKEESSSVTVGTGGGGGS
LLAAKVEDFNRRLREDPADTPTWLEFVRFQDELMAAASPFSRSEGEAEGRRKSLRMTLEK
KVSILDRALESNPSCVDLKLARLRLGRELWDAATLIREWRQMVFLRPNDPWLWREYLLFI
QGQFSTLTVPKVSAIYGKGLSTLASVLDGALVSHPVLPGTEEAMLGLFLQQCHFLRQAGH
SEKAIALFQAQLDFNFFKPDTVKDMHTKQQVEFFEPFWDSGEPRVGEKGARGWRAWMHQQ
ERGGWVVPGEPDDDDDDEEDEGSEVKDKTWPKWRIWLDVETSREASHWLPWRPDKAKGQS
EEDCEDPDRQVLFDDVGPSLIRLMQPELRVQLLRSFLHFLGMPADGCLRGPSWNILLDDL
SLLQEAPDTDRPLTSGLLPTGVSPVGHTTMLGAARRTVGLCKQGEEFIQLAVQQLWPLLS
GPEKSQLSLCLLQYEKLKVLRCIRSKAKKQVRSQGKRSKRLAKRILKEECNRSDLALWRE
FGHLEWLLGNLEEARKVLDTALALGLVRGFQDPALCDLCLLYAQLEVEQGAGPAAGTASP
ALHLLSSLAEGGTYSHFSGQVPPVSVLKARRTYEQALAAGGGVGLVGCFALFQYLTVGVE
AADQVYREAVERLEAAEEPHPRQDSLCQAASELEALCMSRASLLRYAMSSSICPMGRLRD
TLTSSISRFPGNQYLWQLYLLAESRYHGAGRSRRFTRGVTQRSPGIVPWLFTIRAEQSLK
MLVESVQKSDLYGDVQATLPESGLKHRIRALFESAAASEHGARCPLLWKMYLHFLVSERE
MERGRGIFYKALQYVPWVKSLYMDAVLLFPDNVQEFLDLMQEKELRLRVPMEEVDILLED
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atggcactctttccagcttttgccgatgtgtcaaacagaaatcccagtaatgaaaattct
tccaaagacctggactggctcagcaaccagagcttccggccccatgacgccctggtcctt
caccagaaagccctggagcagacgacatctgaggggcaggaggtctcacaagatgggtct
ttgggtcctgaatggaaggatgatgtcaggtctaagagaaagaagaagaaagagaagaag
aagaaaaggaagaagaagagagggagcagcggagaggactctgggggcagcggctatgag
tcggacacagtctatcctagcgaccttttaaaacaggctaaagatgcagagaggcaggag
gaccagaccttgtctcagggatctttcatgtggctggacgacctcccagccccctcagac
cgccccttctgcattgacaagaaagccaatgccgggaactggcagtataagtccctgtac
cgtggcgacatcgccaggtacaggcgcaaaggtagctcctgcctgggcctggactccaag
actcaggcggtgagctgggccgagaccaagccgaccaacgcgaagcgggtgttgcggacc
gcggagcgctacttctgcagcgtcagccgtcagcagctgagtgcggccggccggccagaa
ctgcccggctcacgtggatcgggcccgagtctggcagcagtccgcttcattcccgtacct
cctgttctcgaggaggaggggagcatgagaaccaccatgggccctacttgggttaatccc
ttaggggtctacgactcgtccacctcgttgtggctgcagggtaaaggcctgccggagtca
gaaggccagaaggaagagtcctcctcggtcaccgtggggacgggtggaggtggtggctcc
ttgctggctgctaaggtggaagacttcaaccggaggctgcgtgaggatcccgccgacacg
cccacttggctggagtttgtccgcttccaggatgagctgatggctgcagcaagccccttc
tcgaggtcagagggcgaagcggaggggcgtaggaagtctctgcggatgaccctggagaag
aaagtgtctatcctggacagggcgctggagagtaacccgagctgcgtggacttgaagttg
gcacgactgcgtctgggccgcgaattatgggatgcggcgacgctgatccgggagtggagg
cagatggtgttccttcggcccaatgacccgtggctctggagggaatacctgctcttcatc
cagggccagttcagcaccctcaccgtgcccaaggtcagcgccatctacggcaagggcctg
agcaccctggcgtccgtgctggacggggcgctggtgtcacacccggtcttgccaggcaca
gaggaagccatgctgggcctcttcctgcagcagtgtcacttcctcagacaggcaggtcac
tcggaaaaggccatcgctctcttccaggcgcagctcgacttcaacttcttcaagccggat
acggtgaaggacatgcacaccaagcagcaggtcgagttcttcgagcccttctgggacagt
ggggagccgcgtgtgggagagaagggggcccgtggctggagagcatggatgcaccagcag
gagagggggggctgggtcgtccccggagagccagacgacgacgacgacgatgaggaggac
gaaggatcagaagtgaaggacaagacctggcccaagtggcgcatctggctggatgtggag
acatcccgtgaggccagccattggctaccttggaggccggacaaagccaagggccaatcg
gaagaggactgtgaagacccagacagacaggtcctgttcgacgacgtggggccctctctg
atccggctgatgcagcctgagctccgcgtccagctactccgctctttcctgcatttcctg
ggaatgccggctgatggctgcctccggggcccctcttggaacatcctgcttgacgacctc
tccttgctgcaggaggcccccgacactgacaggcccctgacctcgggcctcttgcccact
ggggtcagccccgtgggtcatacgaccatgctaggtgctgctcgcaggacggtgggcctg
tgcaagcagggggaggagttcatacagctcgccgttcaacagctgtggcccttgctctct
ggcccagagaagtcccagctgtcactgtgcttgctacagtatgagaagctcaaggtgctg
cgctgcatccgttccaaggccaagaagcaggtgaggtcccagggcaagcggagtaagagg
ctcgccaagcgcatcctgaaggaggagtgtaaccggagcgacctggcactgtggagggag
tttggccatctcgagtggctgctgggcaacctggaggaggcccgcaaggttctggatacg
gcactggcactgggcctggtgcggggtttccaggaccccgccctgtgtgacctgtgtctg
ctctacgcccagctggaagtggagcagggggctgggcctgcggccggaacggcgtccccc
gcgctgcatctgctctccagcctggccgagggtgggacctactcccacttcagcggccag
gtgccacccgtatctgtcctgaaagcccggcggacctacgagcaggccctggcagctggg
gggggcgtggggctggtgggctgcttcgccctgtttcagtatctgactgtgggggtggag
gctgcggaccaggtgtaccgggaggccgtagagcggctggaggctgcggaggagccccac
ccacgacaggacagcctgtgccaggcggcctctgagctggaggctctctgcatgtcacgt
gcctccctgctacgttacgccatgagctccagcatctgtcccatgggccgtctccgtgac
accctcacctcctccatctcccgtttccctggcaaccaatatctctggcagctgtacctg
ctggcagagagccggtaccacggcgctggccgctcccgccgcttcacccggggcgtcacg
cagcgctcgccaggcatcgtgccctggttgttcaccatccgtgccgagcagagcctgaag
atgctcgtggagagcgtgcagaagagcgatctctatggggacgtccaggccacacttcca
gaaagcggcctcaagcatcggatccgggcgctgttcgagagtgcggcggccagcgaacat
ggggcacgctgccccctgctgtggaagatgtacctgcacttcctggtttccgagagggag
atggagcgaggcaggggcatcttctataaagcactgcagtacgtcccatgggttaagagc
ctctacatggacgccgtgttgctgtttccggacaacgtgcaggagttcctggacctgatg
caggagaaggagctacggctgcgggtgcccatggaggaggtggacatcttgctggaggac
tga
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