Paramormyrops kingsleyae: 111853078
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Entry
111853078 CDS
T05788
Symbol
rfc1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
pki
Paramormyrops kingsleyae
Pathway
pki03030
DNA replication
pki03410
Base excision repair
pki03420
Nucleotide excision repair
pki03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pki00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111853078 (rfc1)
03410 Base excision repair
111853078 (rfc1)
03420 Nucleotide excision repair
111853078 (rfc1)
03430 Mismatch repair
111853078 (rfc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pki03032
]
111853078 (rfc1)
03400 DNA repair and recombination proteins [BR:
pki03400
]
111853078 (rfc1)
DNA replication proteins [BR:
pki03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
111853078 (rfc1)
DNA repair and recombination proteins [BR:
pki03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
111853078 (rfc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
AAA_30
AAA_5
Rad17
AAA_7
AAA_16
BRCT_2
RuvB_N
AAA_33
AAA_14
AAA_17
nSTAND3
AAA_19
AAA_18
NTPase_1
RNA_helicase
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
111853078
NCBI-ProteinID:
XP_023685375
Ensembl:
ENSPKIG00000004363
UniProt:
A0A3B3RKQ4
LinkDB
All DBs
Position
Unknown
AA seq
1155 aa
AA seq
DB search
MDIRRFFAPSKPVVQKPAQNGGVRSVEDQKRNKAKPGSKTKSPETVEKSSVKRKKRAVLH
SDSEEEEVEKKPKKSPQETQKPAKGAPPPKKHPVQYVSETDSDSDTFVSLKKPTKSDDNG
LSKSAAAGPDKKATSAVSSPPKPSCRKGKVKSPPTPATPKAAASLPKQTHTSVLDFFGSS
SIQRSDKKLVASTKRKAATQDMDDSQSDEAIARQLQMDEDLEKQLHDDEEFARTLAMLDE
APQPKKARRESGSPSKSSTGPAQLSIKISPVSGSQSRANSKAGAKGPSSKKSPVKTSSKL
ASMKRKEEENARKKHEGATKMVISPKKEPPRTSTSETQNVAKSGMPSTAKSEPVTTPVSK
KISPKKAESVSPEDAEKKRVNSSAYRNYLNREGPRALGSKEIPQGAENCLEGLTFVVTGV
MESMERDDAKSLIERYGGKVTGNVSRKTSYLVLGRDSGASKTEKAESFGTKIINEDGLLD
LIRTKPGKKSKYEIAAEVENKKTPEPSRTRRTPQKTSPRKQTPAKKTPSSRKSPRGKAAT
PKQEPSSSGSLGAGAREARKGLSFDTAERHGASTTTAAPVPDTEGSSLLWVDKYRPHTLK
GLIGQQGEQSCANKLLRWLQNWHTGNTKPAAARFGKFGGKDDGSGFKAALLSGPPGVGKT
TTAALVCEELGYSYVEMNASCTRSKNNLKEVVAESLNNTSIKSFYSGASQTVSSKHVLIM
DEVDGMAGNEDRGGIQEMISLIKQSKIPIICMCNDRNHQKIRSLANYCFDLRFQRPRLEQ
IKGAMMSIAYKEGLKVPAPALNELILASNQDIRQILHNLSMWSAKDKVMTYDQVKADAKN
ARKDMKLGPFDVCRKVFSAGNETAQMSLMDKSDLFFHDYSLAPLFVQENYLHVRPAAAGN
LKCHLVLLSKTADSICDGDLVDRQIRSRQTWSLLPTQAIYASVLPGELMRGYMSQFPTFP
SWLGKFSSTGKHNRTIQELASHMSLRAHVSKQAINLDYLPYLRSALLEPLQRYGADGATK
AVQLMNDYDIIKEDMDSIMEISTWGGQPDPYSKLDPKVKAAFTRAYNKESHLTPYALQAV
KKGRRGAVDAELGEGGLEQESQELAAEEDEDVAADAMVKQKKMKASKETTKQQKAGDSGK
GKGKGKGKGQGKGKK
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atggacatccggaggttctttgcgcccagtaagccggtggtgcagaaacctgcccagaac
ggaggcgtcagaagcgttgaggaccagaagaggaataaagcgaagcctggctcaaagact
aaaagccctgaaacagtggagaagtcatcagtgaaacgaaagaaacgtgcggtcctgcac
tccgactcagaagaggaagaggtggagaagaaacccaagaaatccccccaggaaactcag
aagcccgccaagggtgcaccccccccgaagaaacacccggttcagtacgtctcagaaacc
gattcagacagtgacactttcgtgtccctgaagaaaccgactaaatctgacgacaatggg
ctgtccaagtcggccgcagcaggtccggataagaaggcgacctctgccgtcagctccccc
ccaaaaccgtcttgcaggaagggcaaggtcaaatcgccccctaccccagccacccccaaa
gcagccgcctcccttcccaagcagacccacacctctgtactggacttttttggcagcagc
agcatccagaggtcggataaaaagttagtggccagcaccaagcggaaagctgccacacag
gatatggatgactcccagagtgatgaggccatcgccagacagctgcagatggatgaagat
ctggagaaacagctgcacgatgatgaagagtttgcaaggacgttggccatgttggatgag
gcccctcagcccaaaaaggctcgcagagaatctggttcacccagcaagagcagcacgggc
ccggcccaactcagcatcaagatttctccagtctctggttcccagtcccgtgccaacagc
aaggccggtgccaagggtccgtcctcaaagaagagccccgtcaagacgagctccaagctg
gccagcatgaaaaggaaggaagaagaaaatgccagaaagaagcatgagggggctaccaag
atggtcatttcgccaaagaaggagcccccaagaacatccacttcagagacacagaatgtt
gccaaatcgggaatgccctcgaccgccaagagcgagcccgtgaccacgcccgtcagcaag
aagatctcccctaagaaggcagagagtgtcagcccagaagacgcagagaagaagcgcgta
aattcgtcagcataccggaactacctgaacagagaaggccctcgtgccctgggctccaaa
gagatccctcagggtgcagagaactgtctggagggcctgaccttcgtggtgacgggcgtg
atggagtccatggagagagatgacgcaaagtccctcatcgagcgctatggcggcaaggtc
acgggcaacgtcagccgcaagacgagctacctggtgctgggcagagacagtggggcctcc
aagacggagaaggctgaaagttttggcacaaagatcataaatgaagatggtttgctggat
ctcatacggaccaaaccgggcaagaagtctaagtatgagattgctgctgaggttgagaac
aagaagacccctgagccctccaggacgagaaggaccccacagaagaccagtcccagaaag
caaaccccagccaagaagacgccatcttctaggaagtcacccaggggcaaggcagccaca
cctaaacaagagccttcgtcaagtggcagccttggggccggtgccagagaggccaggaag
ggcctgtccttcgatacggcggagcggcacggtgcctcaaccacgacagcagcaccggtg
ccagataccgaagggtccagtcttctgtgggtggacaagtacaggccacacaccttgaaa
ggcctcatcgggcaacagggtgaacaaagctgtgccaacaagctgctgcgctggctccag
aactggcacactggcaacacaaagcctgctgcggcccggttcggcaagttcgggggaaag
gacgatggctccgggttcaaggcagcgctgctctcgggaccccctggggtgggaaagacc
actacggccgccctggtctgtgaggaacttggctacagctatgtggagatgaacgctagc
tgtacccggagcaagaacaacctgaaggaggtcgttgctgagtccctcaacaacactagt
atcaagagcttctactcaggtgcctctcagactgtgagcagcaagcatgtgctcatcatg
gacgaggtggacggcatggcaggcaacgaggacaggggcggtatccaggagatgattagc
ctgataaagcagtcaaagatccccatcatctgcatgtgtaatgacaggaaccaccagaag
atccgctccctggccaactactgcttcgacctgcgcttccagagaccccgtctagagcag
atcaagggagccatgatgtccatcgcctacaaggaaggcctcaaggtcccagcaccagct
ctcaatgagctcatcttggcgtccaaccaagacatcagacagattctccacaacctgagt
atgtggtcggccaaagacaaagtcatgacctatgatcaggtcaaagccgacgcaaagaat
gccaggaaggacatgaagctgggcccgtttgatgtctgtcggaaggtcttctctgctgga
aacgagactgctcaaatgtccctgatggacaaatccgaccttttcttccacgattactca
ttagcgcccctgtttgtccaggagaactacctgcacgtccgtccggccgcagcaggtaac
ctgaagtgtcatctggtgctcttgagcaaaaccgcagacagcatctgtgatggagatctg
gtggatcggcagatccgatcccgtcagacctggtctctgctgcccacgcaggccatctac
gccagcgtgcttccaggggagctgatgaggggctacatgagccaattccccaccttcccc
agctggctgggcaagttctcctccacgggcaaacacaaccgcaccatccaggagctggca
tcacacatgagtctcagggcgcatgtcagtaagcaagccatcaacctggattacttgccc
tacctgcgctctgccctgctggagcccttgcagaggtacggagcggacggcgccaccaag
gccgtgcagctcatgaacgactacgacatcatcaaggaagacatggacagcatcatggaa
atcagtacctggggcgggcagccagacccctactccaaactggaccctaaggtgaaagcg
gccttcacccgagcgtacaacaaggagtcccacctgaccccgtacgccctgcaggcggtg
aagaagggccggcgcggagccgtggacgccgagttgggagagggggggctggagcaggag
tcgcaggagctggctgcggaggaggacgaggacgtggccgctgatgccatggttaagcag
aagaaaatgaaggcaagtaaggaaacgacaaagcagcagaaggcaggggattctgggaag
ggcaaggggaagggaaagggcaagggccaaggcaagggcaagaagtga
DBGET
integrated database retrieval system
