Paramormyrops kingsleyae: 111854163
Help
Entry
111854163 CDS
T05788
Symbol
rc3h2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
pki
Paramormyrops kingsleyae
Brite
KEGG Orthology (KO) [BR:
pki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pki03000
]
111854163 (rc3h2)
04121 Ubiquitin system [BR:
pki04121
]
111854163 (rc3h2)
Transcription factors [BR:
pki03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
111854163 (rc3h2)
Ubiquitin system [BR:
pki04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111854163 (rc3h2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-CCCH_4
Prok-RING_4
zf_CCCH_4
zf-C3HC4_2
NS3_helicase_C
zf-RING_4
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
111854163
NCBI-ProteinID:
XP_023687628
Ensembl:
ENSPKIG00000021910
LinkDB
All DBs
Position
Unknown
AA seq
1083 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDGSGHKPISLGCSHTVCKTCLHKLHRKACPFDQTAISTD
IDLLPVNCALLQLVGAQVPDRQPVSLSSVSENKHYEACRQCVEELALYLKPLSGGKGVAT
LSQSTLSRPMQRKLVMLVNCQLVEEEGRVRAVRAGRSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEDALKLVLLALEDGSALSRKVLVLFVVQKLGARFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLVHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNSLRPQLELLANI
DHNPDAASPTWDQLEKVMLAVKVVVHGLVDFIQNFSKKSHETPQPQPNSKYKTSMCRDLR
MQGGCPRGTNCTFAHSQDELEKFRMRNKKISNTGRNFPSAQTPLGKGGGSVTSTPAGGVS
PGDSESAEKGVSLMEGTAPPQLIPRGGETLDEQKRTVRNGSNGAAGPSGPTSSQSEQKTV
SPPKTPVNHISATSPHAPGSTADSSSPHPKHGPYILRGPLYPPQSDIYYQEQRTSFDTPS
YPPSSNYYASAVPPPKPCVTRFLRSSNVPESSLPPAVAGYPEQPPSFSLRERPPPYGPAP
QYGQLAPAHGIYAPVYDSRRLWRPQMYHREDARSNSLPPEVLHSSVYQPPLRERFNSLDG
PYCAAGEQRATLQRDSYNRVALGYEELVRRKPEQWASQHGPGPSSSSPLFTVDFTRELSE
SVGKDCVGCKESLSQYSPWSCGTISTCISTAESDLHGVMATNASELPQDLEGCGVKRRLR
GPEPSGYRRPKEEDPIIPFGEGPIISKWGAISRASRTEYHTTEPVQATASRGGATTTPIS
FRDYGSYISHSDYRWSSQGSDPPCHSSFLDSDQRGVPGLRAQRQSSSADENRSTDLLQAD
VCTDGVDGEPDRDIELELSALDIEEASSQDDKTQIQESLRAPPHGTHLPDGPASGNGHQR
SQPDTLSSDKMGAHLLKKMAFRKPVSPDRHGSSGLCVSKLVMKTGRGDVPHPSTGAEMLL
NGS
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgcaggcggctcagtggaccgagttcctctcttgccccatctgctacaatgag
tttgatgggagtggccacaagcccatcagcctaggctgctcccacaccgtctgcaaaacc
tgcctgcacaagctgcaccgcaaggcctgtcccttcgatcagacggccattagtacggac
attgacctgctccctgtcaactgcgccctgctgcagcttgttggagctcaggtgccagac
cgccagccggtgtcgctgagcagtgtgagcgagaacaaacactatgaggcgtgccgccag
tgcgtggaggagctggcgctttacctgaagcccctcagtggagggaaaggtgtggcgacc
ctgagccagagcacgctcagccggcccatgcagcgcaagctggtcatgctggtgaactgc
cagctggtggaggaggagggccgcgtgcgggctgtgcgggcgggccgctccctgggcgag
cgcaccgtcaccgagctcatcctgcagcaccagaacccccagcagctgtccgccaacctg
tgggcggcggtacgggcgcgtggctgccagttcctggggcccgccatgcaggaggacgcc
ctgaaactggtgctgctggctctggaagacggctcggccctgtccaggaaggtgctggtc
ctgttcgtggttcagaagcttggggcccgtttcccccaagcctccaaaaccagcatcggc
catgtggtccagctgctctaccgggcgtcctgtttcaaggtgaccaagcgcgatgaggac
tcatccctcatgcagttgaaggaggagttccgcacatacgaggcactacggcgggagcac
gacgcccagatcgtccacattgccatggaggcaggcctgcgcatctcgcccgagcagtgg
tcctcgctgctctacggcgacctcgtgcacaagtcccacatgcagtccatcatcgacaag
ctccagtccccagaatcctttgcaaaaagcgtccaggagctgaccattgttcttcagagg
acgggagatccagccaacttgaacagcttaagacctcagctggagctcttggctaacatc
gatcacaatccagatgccgcctccccgacgtgggaccagctggagaaggtgatgctggct
gtgaaggtggtggtccacggcctggtagacttcatccagaacttcagcaagaagagccac
gaaaccccacagccgcaaccaaacagcaagtacaagacgagcatgtgccgcgacctgcgc
atgcagggtggctgtccccgggggaccaactgcaccttcgcccactcccaggacgagctt
gagaagttcaggatgaggaacaagaagatcagcaacactggcagaaacttcccatccgcc
cagacacctttaggcaaaggggggggcagtgtgacgagtacccctgcagggggggtttct
ccaggggactcagagagcgcggagaaaggagtgtcactgatggagggcacagcccctccc
cagctcatccctaggggtggggagactctggatgaacagaagaggacggtccggaatgga
tccaatggagcggctggtcccagtggccccacttccagccagagcgagcagaagactgta
tctcctccgaagacacccgtcaatcacatctcagctacctcacctcatgccccaggctcc
acagcggacagcagctctccacaccccaaacatgggccctacatcctcaggggccccctg
taccctccgcagtcggacatttattaccaggaacagaggacatcttttgatacaccgtca
taccccccatccagtaattactatgcctccgcagtgcccccgccgaaaccgtgtgtcacc
cgcttcctgcgctccagcaacgtgcccgagtcctcgctgcccccggccgtggctggatac
cctgagcagcccccatccttctccttgcgggagaggccgcccccctacggccccgcccca
cagtacggccagctggcgccagcacacggcatctatgcccccgtgtacgacagccgccgc
ctctggcggccgcagatgtaccaccgggaggacgctcgcagcaattccctgccccctgag
gtgctgcactcgtccgtgtaccagccgcctctgagggagcgcttcaactcactggacggg
ccttactgtgccgccggggagcaaagagccacactgcagagggactcctacaacagggta
gccctcgggtacgaggagctggtccgccgcaagcctgagcagtgggcctcacagcacgga
cccgggccgtcctcgtcctcgccactcttcacggtcgacttcacacgggagctctcagaa
agcgtgggaaaagactgtgtgggatgcaaggagagcctgagccagtactcaccctggtcc
tgtggtaccatcagcacctgcatcagtaccgcggagtcagacctgcacggcgtcatggcg
acaaatgcctctgagctgccgcaggacctggaaggctgcggcgtgaagcggagactgcgc
ggcccagagccctctggctaccgcaggcccaaggaagaggaccccatcatcccgtttgga
gaagggcccatcatctccaagtggggtgccatctcacgggcctcccgcacggagtaccac
accaccgagcccgtgcaggccacagcctcccggggcggggccaccaccactcccatcagc
ttccgagattacggctcctacatcagtcacagcgactacaggtggagctcccagggctcc
gaccccccctgccactccagcttcctcgacagtgaccagcggggagtccccgggctgaga
gcccagcgccagtcttccagcgccgacgagaaccggagcacagaccttctacaggctgac
gtctgtacagacggcgtggacggcgagccggacagggacattgagctggagctgtccgcc
ctcgatatcgaagaggccagctcacaggacgacaagacccagattcaggagtcgctaaga
gcgccccctcatggtacccacctccccgacggtccagcgtccggtaacgggcaccagagg
agccaaccggacacgctctcatcagacaagatgggggctcacctgctgaagaagatggcc
ttcaggaagcctgtctcccccgacaggcatggctcatctgggctctgcgtcagcaagtta
gtcatgaagacggggcgaggtgatgtcccccatcccagcactggggctgagatgctgctc
aacggtagctga
DBGET
integrated database retrieval system
