Paramormyrops kingsleyae: 111854633
Help
Entry
111854633 CDS
T05788
Symbol
topbp1
Name
(RefSeq) DNA topoisomerase 2-binding protein 1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
pki
Paramormyrops kingsleyae
Pathway
pki03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pki00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111854633 (topbp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pki03032
]
111854633 (topbp1)
03400 DNA repair and recombination proteins [BR:
pki03400
]
111854633 (topbp1)
DNA replication proteins [BR:
pki03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
111854633 (topbp1)
DNA repair and recombination proteins [BR:
pki03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
111854633 (topbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
TopBP1_BRCT0
BRCT_2
RTT107_BRCT_5
BRCT_TopB1_SLF1
LIG3_BRCT
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
111854633
NCBI-ProteinID:
XP_023688570
Ensembl:
ENSPKIG00000011486
UniProt:
A0A3B3SK88
LinkDB
All DBs
Position
Unknown
AA seq
1524 aa
AA seq
DB search
MSNGGGVGFIVKFVEAGEQRSELASQAYEAVLELQSEKYLQTISEQEALQLSHNDKSLYV
FSSFSSPAFHHCRKLACRVVSPLVVLFCLQRQRCVPKAEQPIYNMAMADVTVSCTSLDKA
ARTEVMELVQLMGGRVYRDLNVSVTHLVAGEVGSKKYLVAASLGKPILLPTWVKTCWERS
QDSLLHHSELPLEQYACPVLRGCTVCVTGLSSAERKEVQRLCNQHGAQYSGQLKMNECTH
LIVSEPKGQKYECALKWNVYCVSLHWLFESIEKGFCQDESRYRVEPTAKQPGKPQTSTPT
SDKRKERPSDLLGVSQISNISHMSVNDSVLTTALGSRLETPDPLDTLDITVCPADDLLDG
CKVFLCGVSGKKMEKLRRLVNSAGGLRFNQPSEDLSHVVMGEPDQDLISYVSKAIHRPHV
VTVQWLLDSFSKGCLLPEEGYLHAACLPPTPASVLMPAPARSASHRKPPADPPAPSPARH
RAEEDLLSQYLNPDHTVVEIPQVAQTTRRWSTLVPDPLDPEPLNPELVPGQDSTLRHLEG
GLFSGKRFLLVGFGSEAEAHLSLLVTENAGRVLASHTRAVADYAIVPLLGCEVEPTVGDV
ATDTWLAMCVEQQCLLDLSSHPMFMPLAVVENRTPLRGCVLSVSQFTGAERESLIELARH
LGASVQDYFVRAANQKKGMLASTHLVLSTPEGTKYQAAQKWGLPAVTMAWVLASAKMGRR
TDESRFLVDRPPSPEREEESFVGGSQKPAMPAVISPEIPIMGPQVGAAVTPLDLGRFQSK
AFRSALEQKRQQEEKDVSTPGQEALREFPKESPLQLDTPSHFLRRDHLFRPSFNVKDALA
ALETPGGGSQQGRSTITPLSEVIGRNLQVALANSTRNSVSAIAALTASPQLSKDTVKVQD
KDNGPLVGVVICVTKKLSKKQSELNAIAASLGADFRWSCDDTVTHYIYQGRAGDSSREYR
SLKDRGVHVVSEHWLHACANEQKHVPESLYPFTYNPKMSLNLSQMPESSLRSPPAPHLQP
QDLTEVFADKSHSSTEDNALEIQCDDGGEPDQDNQEHMQKREMEEALEMRENLQRQLQEI
MSATKMTIGRRSSRLMRVGSSGVDSHPNTPDSLGSTGRASRSRTFEALRHSRHLPMDINT
EPSQSEQIVWDDPTAREERAKLADNLQWPGSPSQHSEPLPHHEGALNGYAEFSRHEKESI
TDSELVEMVACDVINEHMGRRPLTPPREDMEPQVLTPKAPSIAFPITKPSVPPQAKEETQ
IEDESEAEVEPPRFQLSSLNPQERIDYSHLIEELGGVVLDKQCFDPSCSHIIVGQPLRNE
KYLAAMAAGKWILHRSYLEACRAVSHFIEEEQYEWGSSSILDALPTITSQQRRLALAAMR
WRKTLQGRQDQQGAFSGWTVMLNIDQAREAGFRRLLQSGSAKVLPSPSPALYKDTTHLFA
DFSRLKPADFRVDVVEATAQGTRCLRPEYIADYLMQEPSPPMEAYYLPQAVQYLQSSVGG
STSILSRKRKASGDSSVLKKSRLT
NT seq
4575 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacgggggcggcgtggggttcatcgtgaagtttgtagaggctggggagcagcgg
tccgagttggcgtcccaggcctacgaggctgtcctggagctccagtctgagaaatacctc
cagaccatcagtgaacaggaagccctgcagctgagccacaacgataaatctctgtacgtg
ttcagcagcttctccagcccggccttccaccactgcagaaagctggcatgccgcgtggtg
agccccctggtagtgctcttctgtctccagcggcagcgatgcgtacccaaggccgagcag
cccatctacaacatggcgatggccgacgtcactgtctcgtgcactagcctggacaaggct
gcacggacagaagtgatggagctggtgcaactgatgggcggccgagtttaccgcgacctc
aatgtgtccgtgacacacctggtggccggagaggtgggcagcaagaagtaccttgtggct
gccagccttggtaaacccattctactgcctacctgggtgaagacgtgctgggagaggtct
caggacagtttgctccaccattcggagttgcctctggagcagtacgcgtgcccagtgttg
cgcggctgtaccgtctgtgtgacggggctgtccagtgccgagcgcaaggaggtgcagcgc
ctctgcaatcagcatggggcgcagtacagtgggcagctcaagatgaacgagtgcacacac
ctcattgtcagcgagcccaaaggacagaagtacgaatgcgcgctcaagtggaatgtctac
tgtgtgtcgctgcactggctgtttgaaagcatcgagaaaggcttctgccaggacgagagc
cggtatcgcgtggagcccacagccaagcagcccggcaagccccagacttcaacccccacc
tcagacaagcgcaaagaaagaccatcagatctgttgggtgtgagccaaatctcaaacatc
agccacatgtctgtgaatgactcggtactcaccacggcattgggcagtcgtctggagaca
cccgaccccttggacacactggacatcacggtctgtcctgcagatgaccttctggatggc
tgcaaggtgttcctgtgtggagtatcgggtaagaaaatggaaaagctgcggcgtctggtc
aacagtgcagggggactacgcttcaaccagcccagtgaggatctcagccacgtcgtcatg
ggggagcctgaccaggacctcatcagctatgtatcgaaggctatccaccgcccccatgtg
gtgacggtgcagtggctgctggacagtttctctaaaggctgcctgctccctgaagagggc
tacttgcacgctgcctgcctgccacctacccctgcgtcagtgctgatgccggccccggcc
aggtctgcctcacaccgtaagccccccgcggaccccccggcccccagccctgccagacac
agggctgaggaggacctgctctcccagtacctgaatccggaccacactgtggttgaaatt
cctcaagtagctcaaactaccagaagatggagtactttagtcccagatccactagatccg
gaacctttgaacccagagttggtaccagggcaagactctacccttcggcacctagagggt
ggcttgttctcggggaaacgcttcctgctcgtgggctttggctctgaggcagaggcccat
ctctcgctgctggtgacagagaatgcgggccgggtcctagcgagccacacgcgtgccgtg
gcagactacgccattgtgccgctgctgggctgcgaggtggagcccaccgtgggggacgtt
gccacggatacctggctggccatgtgtgtcgagcagcagtgccttctggacttgagctcc
catccgatgttcatgccgctggctgtggtggaaaatcgcacccccctcaggggctgtgtg
ctctccgtcagccagttcacgggggcggagcgtgagtccctcatagaactggctagacac
ctgggagccagtgtccaggactattttgtgcgggcggcaaatcaaaagaaaggcatgctg
gccagtacccacctggtgctgagtaccccagagggcaccaagtaccaggcagcccagaag
tggggccttccagccgtgaccatggcatgggtgctggcgtcggcgaagatggggcgtcgc
acagatgagagcaggttccttgtggaccggccaccttctccagagagggaggaggagagc
tttgtgggtggctcccagaagccagccatgcctgctgtaatctcacctgagatccccatc
atggggccgcaggtgggggctgcagtcacccctctggacttgggtcgcttccagagtaag
gccttccgctctgcactggagcagaaaagacagcaggaggagaaggacgtcagcaccccg
gggcaggaggccctgcgagaattccccaaagagtcgcccctgcagctggacacaccatcg
cattttctgcgtagggaccacctgttcagaccctcttttaatgtcaaggatgccttggct
gcactggagacccctgggggaggatcccagcagggccggtccaccatcaccccgctgtcg
gaggtcattggaaggaacctgcaagtggcgctggcaaacagcactcgcaacagtgtgtcg
gctatagctgccctgactgccagccctcagctgagcaaggacacagtcaaggtccaggac
aaggataatggccctctggtgggtgtggtcatctgcgtaaccaagaagttgagcaagaag
cagagtgagctgaacgccatcgctgcctcgctgggcgctgacttcaggtggtcctgtgac
gacacagtgacgcactacatctaccaaggccgtgccggtgacagcagccgggaataccgc
tcactgaaggacaggggcgtgcacgtagtatccgagcactggctccatgcgtgtgcaaat
gagcagaagcatgtcccagagtccctgtacccattcacatacaaccccaagatgagtctg
aacctgagccagatgccagagagcagcctgaggtcaccgcctgccccacacctccagcca
caagaccttacagaggtgtttgcagacaagtcccactccagcacagaggataatgccctt
gaaatccagtgtgatgatggtggggagccagaccaggacaaccaggaacacatgcagaag
agagaaatggaagaggccctggagatgagggagaacctgcagaggcagctgcaggagatc
atgtcagccactaagatgaccattgggaggcgctcttctcggctgatgagggtcggatct
agcggcgtagattctcaccccaacacccctgacagtctgggttcaaccggaagagccagc
aggagccgaacctttgaggcccttaggcattcccggcatctacctatggacatcaacaca
gaaccctctcaaagcgaacagatcgtctgggatgaccccacggcacgagaggagcgagct
aaacttgctgacaacctccagtggcctggcagcccctcccagcactcagagcctcttcct
caccacgagggggcgctcaatggctatgcggagttttcacgccacgaaaaggagtcaatt
actgactccgagttggtggaaatggtggcctgcgacgtcatcaacgagcacatgggtagg
agacctctgacaccccccagggaagacatggagccccaggtcctcactcccaaggccccc
agcattgcctttcccatcaccaaaccctctgttccaccccaggctaaagaggagactcag
atcgaggacgaaagtgaggcagaggtggagcccccacgcttccagctgtcatccctgaac
cctcaagagcgcatcgactacagtcacttgatcgaggagttagggggcgtcgtcttagac
aagcagtgtttcgaccccagctgctcccacatcatcgtgggccagccgttgcgcaacgaa
aaatacttggctgccatggcggccggcaagtggatcctgcaccgctcgtacctggaggca
tgccgtgccgtcagccacttcatcgaggaggagcagtacgagtggggcagcagctctatt
ttggacgccctgcccaccatcacctcccagcagcgtcggctagctttggctgccatgagg
tggaggaagacccttcaaggtcgtcaggaccaacagggagcgttcagcggctggaccgta
atgctgaacattgaccaggccagggaagctggcttccggcgtctcttgcagtccggcagt
gcgaaggtcctgccgagcccctcaccagccctgtataaggacaccacgcacctctttgcg
gacttcagcaggctcaagccagccgacttccgcgtggatgtggtagaagccacagcacag
gggacacggtgcctaaggccggagtacatcgctgactaccttatgcaggagccttcacca
ccgatggaggcgtactacctgcctcaagctgtgcagtacctgcagagttcagtggggggc
agcacatccatcctgtcacgtaaacgcaaagcctccggagactcctccgtgctgaagaaa
tccagactaacttga
DBGET
integrated database retrieval system
